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ATCC10864_005818-T1, ATCC10864_005818-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005818-T1
Unique NameATCC10864_005818-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000162:110209..111587+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005818-T1 ID=ATCC10864_005818-T1|Name=ATCC10864_005818-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1379bp|location=Sequence derived from alignment at MCQH01000162:110209..111587+ (Aspergillus niger ATCC 10864)
ATGTCGTCTTTAGATTCAACCGAGTCGACCCTGGCCGAAGTGAAACAGCT
CACCATCCTCGGGCGAGAGGACAGCCTATTGCAGACTGACGCTGAAGATA
GCGACGCTCGACTCGCCCTAGGAATGGAATGTCTTCTAGGAAAAGAAGAG
TCTGTGCGTGATCTTTTGGCCAAACGGCGGAGAGTCAGAACCATGGACGG
CAGCACTGGCTGGGCGGAGCAACTAAGCATCGCTTTAGACTACAAGAATG
CCCTCAGCAGCATTGTTCCCTTCAAAGAGTACCAGAAGAGAATCTCAAAA
ACGATCGGTGGACGCACGCCTTTATCCTGTGCTGCGGAAGGTGGTAACCC
CAAGATAGTTCGCATGTTGTTGGAGGACGGCGAGGATGTGAACGAGAGGG
ATGCGGATAGGTCCAATGGTGTCCCGCTACATTATGCCGTCTACGACGAG
AGCCTGGAGGCCTTCGAGCTTTTGTTACAGCAGAAGGTCGATATCGAGGC
CACGAATATCGACGGACACACGACCCTGGCTGTGGCAGCCCGATACTACC
AATCGGCGGCAGTCGATGTGCTGCTCGACAAATGCAAGCCCAACGTCAAT
CCTAAAGATGTTCACGGATACACGCCGCTACTTCTACTCTTAATGCCACG
CCCGACAATTCGTGGGAAGCTGATGCGCGGCGAAAAATCATGAGGCGTCT
GATCCAAGAAGGAGCAGATATGGAGGCCCGACAAGGATCAAATGGACGGA
CTGCCTTGCATATCGCTGCGGCTCGCGGTAGTATTGAGGATATGGTATTG
TTGCTGGAGAACGGGGCTGACGTCAATATCAGTAGTGCCGAAGGCTTGAC
AGCACTAGATTTTGCTGCAATACAAGGCAACCTGGAGATGGTGACTCTAC
TTCTTGACTACAACGCCAAAGTTGATACGCTGGGAATTCGCAAGATGACG
CCTTTGGATCAGGTGATAATGGCAAATGATAACAACAAGGATCGCCCGCG
TATCATTGAACTTCTCCTGCAACGCAAGCCCGACTTACTCCTGCAAAAAT
CTGCGTCTTACCTTCTCATGGAAGAGGTCACTACCATGGGAATGGCTGTC
TGTCTGGGGACTCCGGAAATGGTGCGGGTATTGCTTCGCTATCCAGGCAG
CGATGCCAAGCAAAGCGTCCTCCGTATGCCTCTCTTGTGCTGGGCTGCAG
TTCAGAGCAAAGCGGACATGGTCGAGACGCTGATACAGCAGGGCGTATCA
CTCCAGGAGGTTGACGGCCGCTACGGGCGAAACGCACTTTCCTGGGCAGT
GATCAAGGGCAGACAAGATCAAGGGCAGACAAGACATAGCTACGCGATTG
CTGCAGACCCCCGGCGTTGGATGGGATGA
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Coding sequence (CDS) from alignment at MCQH01000162:110209..111587+

>ATCC10864_005818-T1 ID=ATCC10864_005818-T1|Name=ATCC10864_005818-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2646bp|location=Sequence derived from alignment at MCQH01000162:110209..111587+ (Aspergillus niger ATCC 10864)
ATGTCGTCTTTAGATTCAACCGAGTCGACCCTGGCCGAAGTGAAACAGCT
CACCATCCTCGGGCGAGAGGACAGCCTATTGCAGACTGACGCTGAAGATA
GCGACGCTCGACTCGCCCTAGGAATGGAATGTCTTCTAGGAAAAGAAGAG
TCTGTGCGTGATCTTTTGGCCAAACGGCGGAGAGTCAGAACCATGGACGG
CAGCACTGGCTGGGCGGAGCAACTAAGCATCGCTTTAGACTACAAGAATG
CCCTCAGCAGCATTGTTCCCTTCAAAGAGTACCAGAAGAGAATCTCAAAA
ACGATCGGTGGACGCACGCCTTTATCCTGTGCTGCGGAAGGTGGTAACCC
CAAGATAGTTCGCATGTTGTTGGAGGACGGCGAGGATGTGAACGAGAGGG
ATGCGGATAGGTCCAATGGTGTCCCGCTACATTATGCCGTCTACGACGAG
AGCCTGGAGGCCTTCGAGCTTTTGTTACAGCAGAAGGTCGATATCGAGGC
CACGAATATCGACGGACACACGACCCTGGCTGTGGCAGCCCGATACTACC
AATCGGCGGCAGTCGATGTGCTGCTCGACAAATGCAAGCCCAACGTCAAT
CCTAAAGATGTTCACGGATACACGCCGCTACTTCTACTCTTAATGCCACG
CCCGACAATTCATATGGAGGCCCGACAAGGATCAAATGGACGGACTGCCT
TGCATATCGCTGCGGCTCGCGGTAGTATTGAGGATATGGTATTGTTGCTG
GAGAACGGGGCTGACGTCAATATCAGTAGTGCCGAAGGCTTGACAGCACT
AGATTTTGCTGCAATACAAGGCAACCTGGAGATGGTGACTCTACTTCTTG
ACTACAACGCCAAAGTTGATACGCTGGGAATTCGCAAGATGACGCCTTTG
GATCAGGTGATAATGGCAAATGATAACAACAAGGATCGCCCGCGTATCAT
TGAACTTCTCCTGCAACGCAAGCCCGACTTACTCCTGCAAAAATCTGCGT
CTTACCTTCTCATGGAAGAGGTCACTACCATGGGAATGGCTGTCTGTCTG
GGGACTCCGGAAATGGTGCGGGTATTGCTTCGCTATCCAGGCAGCGATGC
CAAGCAAAGCGTCCTCCGTATGCCTCTCTTGTGCTGGGCTGCAGTTCAGA
GCAAAGCGGACATGGTCGAGACGCTGATACAGCAGGGCGTATCACTCCAG
GAGGTTGACGGCCGCTACGGGCGAAACGCACTTTCCTGGGCAGTGATCAA
GGGCAGACAAGATCAAGGGCAGACAAGACATAGCTACGCGATTGCTGCAG
ACCCCCGGCGTTGGATGGGATGAATGTCGTCTTTAGATTCAACCGAGTCG
ACCCTGGCCGAAGTGAAACAGCTCACCATCCTCGGGCGAGAGGACAGCCT
ATTGCAGACTGACGCTGAAGATAGCGACGCTCGACTCGCCCTAGGAATGG
AATGTCTTCTAGGAAAAGAAGAGTCTGTGCGTGATCTTTTGGCCAAACGG
CGGAGAGTCAGAACCATGGACGGCAGCACTGGCTGGGCGGAGCAACTAAG
CATCGCTTTAGACTACAAGAATGCCCTCAGCAGCATTGTTCCCTTCAAAG
AGTACCAGAAGAGAATCTCAAAAACGATCGGTGGACGCACGCCTTTATCC
TGTGCTGCGGAAGGTGGTAACCCCAAGATAGTTCGCATGTTGTTGGAGGA
CGGCGAGGATGTGAACGAGAGGGATGCGGATAGGTCCAATGGTGTCCCGC
TACATTATGCCGTCTACGACGAGAGCCTGGAGGCCTTCGAGCTTTTGTTA
CAGCAGAAGGTCGATATCGAGGCCACGAATATCGACGGACACACGACCCT
GGCTGTGGCAGCCCGATACTACCAATCGGCGGCAGTCGATGTGCTGCTCG
ACAAATGCAAGCCCAACGTCAATCCTAAAGATGTTCACGGATACACGCCG
CTACTTCTACTCTTAATGCCACGCCCGACAATTCATATGGAGGCCCGACA
AGGATCAAATGGACGGACTGCCTTGCATATCGCTGCGGCTCGCGGTAGTA
TTGAGGATATGGTATTGTTGCTGGAGAACGGGGCTGACGTCAATATCAGT
AGTGCCGAAGGCTTGACAGCACTAGATTTTGCTGCAATACAAGGCAACCT
GGAGATGGTGACTCTACTTCTTGACTACAACGCCAAAGTTGATACGCTGG
GAATTCGCAAGATGACGCCTTTGGATCAGGTGATAATGGCAAATGATAAC
AACAAGGATCGCCCGCGTATCATTGAACTTCTCCTGCAACGCAAGCCCGA
CTTACTCCTGCAAAAATCTGCGTCTTACCTTCTCATGGAAGAGGTCACTA
CCATGGGAATGGCTGTCTGTCTGGGGACTCCGGAAATGGTGCGGGTATTG
CTTCGCTATCCAGGCAGCGATGCCAAGCAAAGCGTCCTCCGTATGCCTCT
CTTGTGCTGGGCTGCAGTTCAGAGCAAAGCGGACATGGTCGAGACGCTGA
TACAGCAGGGCGTATCACTCCAGGAGGTTGACGGCCGCTACGGGCGAAAC
GCACTTTCCTGGGCAGTGATCAAGGGCAGACAAGATCAAGGGCAGACAAG
ACATAGCTACGCGATTGCTGCAGACCCCCGGCGTTGGATGGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005818ATCC10864_005818Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005818-T1.exon1ATCC10864_005818-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005818-T1.exon2ATCC10864_005818-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005818-T1.cdsATCC10864_005818-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005818-T1ATCC10864_005818-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12796
PFAMPF13637
PFAMPF13606
PFAMPF00023
InterProIPR020683
InterProIPR036770
PFAMPF13857
InterProIPR002110
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000162supercontigMCQH01000162:110209..111587 +
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