You are here

Home

ATCC10864_005839-T1, ATCC10864_005839-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005839-T1
Unique NameATCC10864_005839-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000162:156320..157939-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005839-T1 ID=ATCC10864_005839-T1|Name=ATCC10864_005839-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1620bp|location=Sequence derived from alignment at MCQH01000162:156320..157939- (Aspergillus niger ATCC 10864)
ATGCGTCTTTCACTTCTCCTGGCGGGCGCCATTAACCTGGTTGCTACCCA
GGCTATCGCAACCTCGCGTTGTACTCCTGAGACCTTCACTCCCCATCTTT
CTTCCAACGCCTCTCTCGTTTACGCAGTTCCATATGGACCCAACGATACC
TTTGTTGGCCCGCTGGGCAACTACTCCGGTCTCCCGGAGTACTGCGCCGT
CTACGTTAACGTGAGCTCGTCTGCTACCTCGTCCTACGAATTCGGCCTTT
GGCTGCCCATCAACACTTGGAACAAGCGCTACATGGCTTATGGCAATGGT
GGCTTCACTGGCATGATCGCCTTTGCTGATATGGCACCCGGTCTTTTCTA
CGGCTTTGCTACCGTTTCCACAAACACTGGACACAACTCCTCCGTGACTG
AGGCTGGCGATGCAGGCTGGGCTCTCAACGACCCTGAGACTCGTACTGAC
TGGGGATGGCGTGCACTCCATGGCTCTGTCGCTCTTGGCAAGGAGCTTAC
TGAGGCCTTCTACAGCGAAGATATCAGCTATTCCTACTACGCCGGTTGCT
CCACTGGTGGTCGACAGGGTCTGAAGTCCGTCCAGATGTTCCCTGACGAC
TTCGATGGTGTCCTCGCCGGTGCTTGCGCTTGGTGGACCACTCATCAGCA
AAACTGGGACCTCAAGCTCGCCACCTACAACCTCCCCAACAACGCCAGCC
ACCACATCACCGAAACTCAGGTGGATGCTTTGGCTACTGAAGTCCTCCGT
CAGTGCGACGAAGTTGATGGCGTCAAGGATAACATTATCATGAACGGCTA
TGCCTGCGACTTCCGTCCTGAGACCCTTCTTTGTGACGGTCCCTCCGCCA
ACAAGTCGACCTGTTTCACCGCCGATCAGATCGACACTGTCTACAAGATC
TACAGCCCCTGGGTTGAGACCAACGACTCCTTTGTCTTCCCCAGCTTCGC
CTACGGTGCCGAAACCCAGTTCGCTCAGATGATCATGACCGACGACGACG
AGCAGGACAGCCCCAGTGGTATTGCCTACCCCCGTGACTTTGTCTACAAC
GATGCCAACTGGCCTTGGCAAAACCTGGACTACTCGACCATTGAGCTGTC
CGATCGACTGGACCCCGGTAATGCCACCGCCGGTGACTTCGATCTCCGTC
CCTTCAAGAACAAGGGTGGTAAGCTGATCCATTACCACGGATTTGCTGAC
GGAGAGATCCCCACTGGCTCCAGCATCTACTACTACAAGCAGGTCCAGAA
GATGCTTACCCCTCTTGGCATCGATCTCGACGACTTCTACCGCTTCTTTT
TGATCCCTGGTATGGAGCACTGCTTGGACTCCGTCCACGATGCTCCGTGG
TACATCGCCTCGGCTAACCAGCCCGGCGGCCTGACCGGCACCAATGTCTG
GGGTGTGCCTGGTTACCGTGACCGGAAGCACGATGCCATCCTGGCTTTGA
TGGCCTGGGTGGAGAATGGCATCGCTCCTGATGAGCTGATCGCAACCAAG
TTCGTTGATGACACCCCGGCGGAAGGTGTGCAGGCTCAGCGCCCTCTCTG
CGTCTACCCCAAGGAGGCCAAGTATGTTGGAGGTAACTGGAACAAGACCA
CCGCGTTCGAGTGCCGGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000162:156320..157939-

>ATCC10864_005839-T1 ID=ATCC10864_005839-T1|Name=ATCC10864_005839-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1620bp|location=Sequence derived from alignment at MCQH01000162:156320..157939- (Aspergillus niger ATCC 10864)
ATGCGTCTTTCACTTCTCCTGGCGGGCGCCATTAACCTGGTTGCTACCCA
GGCTATCGCAACCTCGCGTTGTACTCCTGAGACCTTCACTCCCCATCTTT
CTTCCAACGCCTCTCTCGTTTACGCAGTTCCATATGGACCCAACGATACC
TTTGTTGGCCCGCTGGGCAACTACTCCGGTCTCCCGGAGTACTGCGCCGT
CTACGTTAACGTGAGCTCGTCTGCTACCTCGTCCTACGAATTCGGCCTTT
GGCTGCCCATCAACACTTGGAACAAGCGCTACATGGCTTATGGCAATGGT
GGCTTCACTGGCATGATCGCCTTTGCTGATATGGCACCCGGTCTTTTCTA
CGGCTTTGCTACCGTTTCCACAAACACTGGACACAACTCCTCCGTGACTG
AGGCTGGCGATGCAGGCTGGGCTCTCAACGACCCTGAGACTCGTACTGAC
TGGGGATGGCGTGCACTCCATGGCTCTGTCGCTCTTGGCAAGGAGCTTAC
TGAGGCCTTCTACAGCGAAGATATCAGCTATTCCTACTACGCCGGTTGCT
CCACTGGTGGTCGACAGGGTCTGAAGTCCGTCCAGATGTTCCCTGACGAC
TTCGATGGTGTCCTCGCCGGTGCTTGCGCTTGGTGGACCACTCATCAGCA
AAACTGGGACCTCAAGCTCGCCACCTACAACCTCCCCAACAACGCCAGCC
ACCACATCACCGAAACTCAGGTGGATGCTTTGGCTACTGAAGTCCTCCGT
CAGTGCGACGAAGTTGATGGCGTCAAGGATAACATTATCATGAACGGCTA
TGCCTGCGACTTCCGTCCTGAGACCCTTCTTTGTGACGGTCCCTCCGCCA
ACAAGTCGACCTGTTTCACCGCCGATCAGATCGACACTGTCTACAAGATC
TACAGCCCCTGGGTTGAGACCAACGACTCCTTTGTCTTCCCCAGCTTCGC
CTACGGTGCCGAAACCCAGTTCGCTCAGATGATCATGACCGACGACGACG
AGCAGGACAGCCCCAGTGGTATTGCCTACCCCCGTGACTTTGTCTACAAC
GATGCCAACTGGCCTTGGCAAAACCTGGACTACTCGACCATTGAGCTGTC
CGATCGACTGGACCCCGGTAATGCCACCGCCGGTGACTTCGATCTCCGTC
CCTTCAAGAACAAGGGTGGTAAGCTGATCCATTACCACGGATTTGCTGAC
GGAGAGATCCCCACTGGCTCCAGCATCTACTACTACAAGCAGGTCCAGAA
GATGCTTACCCCTCTTGGCATCGATCTCGACGACTTCTACCGCTTCTTTT
TGATCCCTGGTATGGAGCACTGCTTGGACTCCGTCCACGATGCTCCGTGG
TACATCGCCTCGGCTAACCAGCCCGGCGGCCTGACCGGCACCAATGTCTG
GGGTGTGCCTGGTTACCGTGACCGGAAGCACGATGCCATCCTGGCTTTGA
TGGCCTGGGTGGAGAATGGCATCGCTCCTGATGAGCTGATCGCAACCAAG
TTCGTTGATGACACCCCGGCGGAAGGTGTGCAGGCTCAGCGCCCTCTCTG
CGTCTACCCCAAGGAGGCCAAGTATGTTGGAGGTAACTGGAACAAGACCA
CCGCGTTCGAGTGCCGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005839ATCC10864_005839Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005839-T1.cdsATCC10864_005839-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005839-T1.exon1ATCC10864_005839-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005839-T1ATCC10864_005839-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029058
PFAMPF07519
InterProIPR011118
Properties
Property NameValue
NoteSECRETED:SignalP(1-16)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000162supercontigMCQH01000162:156320..157939 -
Powered by Drupal