You are here

Home

ATCC10864_005882-T1, ATCC10864_005882-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005882-T1
Unique NameATCC10864_005882-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:53739..55064+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005882-T1 ID=ATCC10864_005882-T1|Name=ATCC10864_005882-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1326bp|location=Sequence derived from alignment at MCQH01000164:53739..55064+ (Aspergillus niger ATCC 10864)
ATGGCTACCGAAGATGATAACTTCGATATTGACATCTATGGAGATGGCGG
GGGCTACAACGCCAATGAGCAGGGCGACTTTAAGCCCGAGGATGAGATGA
AACATGATGACACAGAGCTTATCCTAGATGCGCCGGAACCCACACAGAAC
GGGAACCCCAACCAAGGCGACGGCTCCTCCGACAGCACCGTCAAGCCGGA
CAGTGAAGGCGGCGCTCCCCATAGTGACCCTGTAACCCAGGCGGCAAACC
CGCAATCCGCGGCCAAGGACGCCCCTGCTCCCCAGCAGGGAGTCAAGCGC
AAGGAGCACGATGATCGACCGACAGACCCTGATGCTACCCCTGCTCTGCT
CATATCGGACTTGTATTGGTGGACCACGGATGACGACATCCGCGGCTGGG
TGTGCCAGGCGGACTGCGAGGATGAACTGAAGGACGTAACGTTCAGCGAA
CACAAAGTGAACGGTAAAAGCAAAGGGTAAGAGGGCAGCAGGAAGCTGAA
AGCAGCGGTGACACATCAGTCCACTGACGTGGTGTTAATAGACAAGCGTT
CCTCGAATTCACCACTCTCCAGGCAGCTACAGCGACGAAACACAAGATCG
AGTCATTCAGCGCCGGCGGACAAACGCGCAAGCACATGGTCACCTACACC
AGCCCGCAACCGAACCCGTTCCGCACGCTGCCCAAGGATGCGCCGATGCG
CAAGGACAACCAGGCGCGCTCGATGTCCGGCGGCTTCAACTCGCCCAACC
CGAACATGAACTTTAGCGGTGGCATGAACAACATGGGCGGAGGCTATCGG
GGCGGACGCGGTGGATACAACAACCGCGGCGGCATGTCCGGCGGCATGGG
TGGTAACTTCGGCAACAACCGTAACTTCCAGAACCCGATGGGTGGCTTCC
AAGGGCCGATGGTGGGCGGAGGCTTCCAGGGTAATCCCATGGGGATGCAG
AACTACGGCTTCAATAACCGCGGAGGCATGATGGGCGGTATGCGCGGTGG
CCCTGGAGGCATGCGCGGTCGTGGTGGTGGCATGGCAGGACCCAATATGA
TGGGGATGCCCGGGATGAATCCGATGGGAGGGATGGGGATGAATGCGATG
CCCGGGGCAATGAATCCGATGATGGGAGGTATGACGGGCAACATGGGGAT
GCAGGGTGAGTAGATTCCAGCATAGTGTGCGTGTGCTTTATGCTGATAGC
AGAGCAGGACAAGGTGGATTCCAGGGCCCCAACCCAGCCTTTAACCAGGG
ATTCTTTCCTCCCAACCAGGGCGTCGGCGATGGATCATGGAACCCTCATG
GGGCCAAGCGCAGTCGCCAGGAGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000164:53739..55064+

>ATCC10864_005882-T1 ID=ATCC10864_005882-T1|Name=ATCC10864_005882-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3627bp|location=Sequence derived from alignment at MCQH01000164:53739..55064+ (Aspergillus niger ATCC 10864)
ATGGCTACCGAAGATGATAACTTCGATATTGACATCTATGGAGATGGCGG
GGGCTACAACGCCAATGAGCAGGGCGACTTTAAGCCCGAGGATGAGATGA
AACATGATGACACAGAGCTTATCCTAGATGCGCCGGAACCCACACAGAAC
GGGAACCCCAACCAAGGCGACGGCTCCTCCGACAGCACCGTCAAGCCGGA
CAGTGAAGGCGGCGCTCCCCATAGTGACCCTGTAACCCAGGCGGCAAACC
CGCAATCCGCGGCCAAGGACGCCCCTGCTCCCCAGCAGGGAGTCAAGCGC
AAGGAGCACGATGATCGACCGACAGACCCTGATGCTACCCCTGCTCTGCT
CATATCGGACTTGTATTGGTGGACCACGGATGACGACATCCGCGGCTGGG
TGTGCCAGGCGGACTGCGAGGATGAACTGAAGGACGTAACGTTCAGCGAA
CACAAAGTGAACGGTAAAAGCAAAGGACAAGCGTTCCTCGAATTCACCAC
TCTCCAGGCAGCTACAGCGACGAAACACAAGATCGAGTCATTCAGCGCCG
GCGGACAAACGCGCAAGCACATGGTCACCTACACCAGCCCGCAACCGAAC
CCGTTCCGCACGCTGCCCAAGGATGCGCCGATGCGCAAGGACAACCAGGC
GCGCTCGATGTCCGGCGGCTTCAACTCGCCCAACCCGAACATGAACTTTA
GCGGTGGCATGAACAACATGGGCGGAGGCTATCGGGGCGGACGCGGTGGA
TACAACAACCGCGGCGGCATGTCCGGCGGCATGGGTGGTAACTTCGGCAA
CAACCGTAACTTCCAGAACCCGATGGGTGGCTTCCAAGGGCCGATGGTGG
GCGGAGGCTTCCAGGGTAATCCCATGGGGATGCAGAACTACGGCTTCAAT
AACCGCGGAGGCATGATGGGCGGTATGCGCGGTGGCCCTGGAGGCATGCG
CGGTCGTGGTGGTGGCATGGCAGGACCCAATATGATGGGGATGCCCGGGA
TGAATCCGATGGGAGGGATGGGGATGAATGCGATGCCCGGGGCAATGAAT
CCGATGATGGGAGGTATGACGGGCAACATGGGGATGCAGGGACAAGGTGG
ATTCCAGGGCCCCAACCCAGCCTTTAACCAGGGATTCTTTCCTCCCAACC
AGGGCGTCGGCGATGGATCATGGAACCCTCATGGGGCCAAGCGCAGTCGC
CAGGAGTGAATGGCTACCGAAGATGATAACTTCGATATTGACATCTATGG
AGATGGCGGGGGCTACAACGCCAATGAGCAGGGCGACTTTAAGCCCGAGG
ATGAGATGAAACATGATGACACAGAGCTTATCCTAGATGCGCCGGAACCC
ACACAGAACGGGAACCCCAACCAAGGCGACGGCTCCTCCGACAGCACCGT
CAAGCCGGACAGTGAAGGCGGCGCTCCCCATAGTGACCCTGTAACCCAGG
CGGCAAACCCGCAATCCGCGGCCAAGGACGCCCCTGCTCCCCAGCAGGGA
GTCAAGCGCAAGGAGCACGATGATCGACCGACAGACCCTGATGCTACCCC
TGCTCTGCTCATATCGGACTTGTATTGGTGGACCACGGATGACGACATCC
GCGGCTGGGTGTGCCAGGCGGACTGCGAGGATGAACTGAAGGACGTAACG
TTCAGCGAACACAAAGTGAACGGTAAAAGCAAAGGACAAGCGTTCCTCGA
ATTCACCACTCTCCAGGCAGCTACAGCGACGAAACACAAGATCGAGTCAT
TCAGCGCCGGCGGACAAACGCGCAAGCACATGGTCACCTACACCAGCCCG
CAACCGAACCCGTTCCGCACGCTGCCCAAGGATGCGCCGATGCGCAAGGA
CAACCAGGCGCGCTCGATGTCCGGCGGCTTCAACTCGCCCAACCCGAACA
TGAACTTTAGCGGTGGCATGAACAACATGGGCGGAGGCTATCGGGGCGGA
CGCGGTGGATACAACAACCGCGGCGGCATGTCCGGCGGCATGGGTGGTAA
CTTCGGCAACAACCGTAACTTCCAGAACCCGATGGGTGGCTTCCAAGGGC
CGATGGTGGGCGGAGGCTTCCAGGGTAATCCCATGGGGATGCAGAACTAC
GGCTTCAATAACCGCGGAGGCATGATGGGCGGTATGCGCGGTGGCCCTGG
AGGCATGCGCGGTCGTGGTGGTGGCATGGCAGGACCCAATATGATGGGGA
TGCCCGGGATGAATCCGATGGGAGGGATGGGGATGAATGCGATGCCCGGG
GCAATGAATCCGATGATGGGAGGTATGACGGGCAACATGGGGATGCAGGG
ACAAGGTGGATTCCAGGGCCCCAACCCAGCCTTTAACCAGGGATTCTTTC
CTCCCAACCAGGGCGTCGGCGATGGATCATGGAACCCTCATGGGGCCAAG
CGCAGTCGCCAGGAGTGAATGGCTACCGAAGATGATAACTTCGATATTGA
CATCTATGGAGATGGCGGGGGCTACAACGCCAATGAGCAGGGCGACTTTA
AGCCCGAGGATGAGATGAAACATGATGACACAGAGCTTATCCTAGATGCG
CCGGAACCCACACAGAACGGGAACCCCAACCAAGGCGACGGCTCCTCCGA
CAGCACCGTCAAGCCGGACAGTGAAGGCGGCGCTCCCCATAGTGACCCTG
TAACCCAGGCGGCAAACCCGCAATCCGCGGCCAAGGACGCCCCTGCTCCC
CAGCAGGGAGTCAAGCGCAAGGAGCACGATGATCGACCGACAGACCCTGA
TGCTACCCCTGCTCTGCTCATATCGGACTTGTATTGGTGGACCACGGATG
ACGACATCCGCGGCTGGGTGTGCCAGGCGGACTGCGAGGATGAACTGAAG
GACGTAACGTTCAGCGAACACAAAGTGAACGGTAAAAGCAAAGGACAAGC
GTTCCTCGAATTCACCACTCTCCAGGCAGCTACAGCGACGAAACACAAGA
TCGAGTCATTCAGCGCCGGCGGACAAACGCGCAAGCACATGGTCACCTAC
ACCAGCCCGCAACCGAACCCGTTCCGCACGCTGCCCAAGGATGCGCCGAT
GCGCAAGGACAACCAGGCGCGCTCGATGTCCGGCGGCTTCAACTCGCCCA
ACCCGAACATGAACTTTAGCGGTGGCATGAACAACATGGGCGGAGGCTAT
CGGGGCGGACGCGGTGGATACAACAACCGCGGCGGCATGTCCGGCGGCAT
GGGTGGTAACTTCGGCAACAACCGTAACTTCCAGAACCCGATGGGTGGCT
TCCAAGGGCCGATGGTGGGCGGAGGCTTCCAGGGTAATCCCATGGGGATG
CAGAACTACGGCTTCAATAACCGCGGAGGCATGATGGGCGGTATGCGCGG
TGGCCCTGGAGGCATGCGCGGTCGTGGTGGTGGCATGGCAGGACCCAATA
TGATGGGGATGCCCGGGATGAATCCGATGGGAGGGATGGGGATGAATGCG
ATGCCCGGGGCAATGAATCCGATGATGGGAGGTATGACGGGCAACATGGG
GATGCAGGGACAAGGTGGATTCCAGGGCCCCAACCCAGCCTTTAACCAGG
GATTCTTTCCTCCCAACCAGGGCGTCGGCGATGGATCATGGAACCCTCAT
GGGGCCAAGCGCAGTCGCCAGGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005882ATCC10864_005882Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005882-T1.exon1ATCC10864_005882-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005882-T1.exon2ATCC10864_005882-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005882-T1.exon3ATCC10864_005882-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005882-T1.cdsATCC10864_005882-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005882-T1ATCC10864_005882-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR035979
InterProIPR034772
InterProIPR034771
InterProIPR012677
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:53739..55064 +
Powered by Drupal