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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000164:55768..56373+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005883-T1 ID=ATCC10864_005883-T1|Name=ATCC10864_005883-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=606bp|location=Sequence derived from alignment at MCQH01000164:55768..56373+ (Aspergillus niger ATCC 10864)
ATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAGATCTACGG
TCCTCCCGAAAACTTCCTCGAGATAGAAGTACAACCCCCCCCCCCCCCCC
CCAATACCCTTCTCCCCCTTCCACCCACACCCCCCAACTAACATCCACCC
CCCTAAAAATCGCAGGTTAGGAATCCCCAAACGCACGGCACCTCGCGCAA
CATGTACACCTCGTACGAAATCGTCTGCCGGACAAACATCCCCGCCTTCA
AACTCAAACATTCCGTCGTGCGCCGCCGATACTCCGACTTCGAGTACTTC
CGGGATATACTGGAGCGGGAGTCGACGAGGGTCACGATCCCGCCGTTACC
GGGGAAGGTGTTTACGAATCGGTTCTCTGATGATGTGATTGAGCATAGAC
GGGAGGGCTTGCAGCGGTTTTTGCAGATTGTCGCCGGTCATCCGCTTTTG
CAGACGGGGAGTAAGGTTTTGGCCAGTTTTGTGCAGGGTATGTTTTTTCT
CTTTCAGAACTTTTCTTGGTTGTTCTTTTGGGATGGGGTGGGGTGAATGT
GCTAACGCTAATGGGGTTTTTGTGTAGATCCGAATTGGGATCGCAATGCG
TGGTAA back to topCoding sequence (CDS) from alignment at MCQH01000164:55768..56373+ >ATCC10864_005883-T1 ID=ATCC10864_005883-T1|Name=ATCC10864_005883-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1287bp|location=Sequence derived from alignment at MCQH01000164:55768..56373+ (Aspergillus niger ATCC 10864)
ATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAGATCTACGG
TCCTCCCGAAAACTTCCTCGAGATAGAAGTTAGGAATCCCCAAACGCACG
GCACCTCGCGCAACATGTACACCTCGTACGAAATCGTCTGCCGGACAAAC
ATCCCCGCCTTCAAACTCAAACATTCCGTCGTGCGCCGCCGATACTCCGA
CTTCGAGTACTTCCGGGATATACTGGAGCGGGAGTCGACGAGGGTCACGA
TCCCGCCGTTACCGGGGAAGGTGTTTACGAATCGGTTCTCTGATGATGTG
ATTGAGCATAGACGGGAGGGCTTGCAGCGGTTTTTGCAGATTGTCGCCGG
TCATCCGCTTTTGCAGACGGGGAGTAAGGTTTTGGCCAGTTTTGTGCAGG
ATCCGAATTGGGATCGCAATGCGTGGTAAATGCAAGCCGTCCCGGAATCC
CGCCAACAAACCTTCGAGGAGATCTACGGTCCTCCCGAAAACTTCCTCGA
GATAGAAGTTAGGAATCCCCAAACGCACGGCACCTCGCGCAACATGTACA
CCTCGTACGAAATCGTCTGCCGGACAAACATCCCCGCCTTCAAACTCAAA
CATTCCGTCGTGCGCCGCCGATACTCCGACTTCGAGTACTTCCGGGATAT
ACTGGAGCGGGAGTCGACGAGGGTCACGATCCCGCCGTTACCGGGGAAGG
TGTTTACGAATCGGTTCTCTGATGATGTGATTGAGCATAGACGGGAGGGC
TTGCAGCGGTTTTTGCAGATTGTCGCCGGTCATCCGCTTTTGCAGACGGG
GAGTAAGGTTTTGGCCAGTTTTGTGCAGGATCCGAATTGGGATCGCAATG
CGTGGTAAATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAG
ATCTACGGTCCTCCCGAAAACTTCCTCGAGATAGAAGTTAGGAATCCCCA
AACGCACGGCACCTCGCGCAACATGTACACCTCGTACGAAATCGTCTGCC
GGACAAACATCCCCGCCTTCAAACTCAAACATTCCGTCGTGCGCCGCCGA
TACTCCGACTTCGAGTACTTCCGGGATATACTGGAGCGGGAGTCGACGAG
GGTCACGATCCCGCCGTTACCGGGGAAGGTGTTTACGAATCGGTTCTCTG
ATGATGTGATTGAGCATAGACGGGAGGGCTTGCAGCGGTTTTTGCAGATT
GTCGCCGGTCATCCGCTTTTGCAGACGGGGAGTAAGGTTTTGGCCAGTTT
TGTGCAGGATCCGAATTGGGATCGCAATGCGTGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0032266 | phosphatidylinositol-3-phosphate binding |
| GO:0035091 | phosphatidylinositol binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR001683 |
| PFAM | PF00787 |
| InterPro | IPR042138 |
| InterPro | IPR036871 |
Properties
| Property Name | Value |
|---|
| Product | Sorting nexin-3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000164 | supercontig | MCQH01000164:55768..56373 + |
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