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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000164:61037..62565- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005886-T1 ID=ATCC10864_005886-T1|Name=ATCC10864_005886-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1529bp|location=Sequence derived from alignment at MCQH01000164:61037..62565- (Aspergillus niger ATCC 10864)
ATGTCTGCGTATTCACCTTCGGCCGGCGTGCCGTTCCCGTGCATGTCGGG
GCAGCCTTCCTACCTGGAACTGTTTCCCTCGGGCGAGATTCCCCATACCT
TTTTCACGTATCAGTGGTGGGAGGACGAGGCCACCACTGTGTTCTGGGCC
TTCGATCCCCATGAGATCAAGCGGGTGATCCGATTCGGACTGTTTCGAGA
CAACAACCTCCCGCGGAAGTCTCTTCAGAAACGCGATCCTCAAGCCATTA
CCGCGTTCCTGTACTCGCTCGTGGAGCCGCATGAGATGGCATTTATCGAC
AATCTGTCCCATTATCAGAAGGTCGAGGAGATTATCCGACGATGTCAGAT
CTCCGGTCCTCCTCTCGAGCCTTGGAGCTGGCTTCCTACCAAGCGAGATA
GTGACCTGCCCTCGATAGCAATAGCAGAAGCCATCGACACAGAGAGTCAT
CTTCATTTCACGCGAATATCGTTCGAGGAACTGGTCCGCTACTTCCTGGG
CTACCGAGCACCCTCGGTAGAGTGGTTTTTACAACAGCATACAGCGCTTT
ACATCCACCTGCTCAACTATCTGCAAATGTTCCCAGAGGAGCTGGGGAAG
TACAAGGAGGTTGAACAGGTACGTAATTGGCATGCTAGCATCATGCACCG
CTGCAAACGTACTGACGCCGGAGCAGCATCTTCAGACTCGCAGCCCTTTT
GCCCACCGTGCCGTAAACCGGTGCCTACACGCCATGAGACAGCCAGTACC
AGCCAGTCCGCCGTACCCGGGCTTCCAGTTCATAGCAGCGCCTATCCAGC
AGCTATTCAAAGAGCATTTACCGAGTCTGAAGGCCATTCTGCTTGAGCTC
TCAGTACTAGGGGTACGGTTTACCCGAACATACGTCCACGCCCGAGAGAT
GAACTGGACGAAGCCATTTTCGGTCGAAATCCCCCTGCTAGATGAGTTGG
ATTTGACGAACCCAGCCCCAGCTCTCGATTTTGCCAAGACAACAACCGCT
GTCGACGAAGAGTACTTCTCAGGACTGAGCCATAAAAGCTTCGTGGAACC
CGATGCCATAATCAAACGACTCCTTGTGCTATGGGAGCTACGCAGCCTGG
AAGTGTGGGAATGTTGCACGGGACTACCAGACATGATAGGCTACATTCAG
GAAATTGTCGAGGTACTATCTTTTCTGTGAGAGTGTATAACATGGAACCA
TATACTAACAACAGCAGGCCCTCTACACCTGCCGCAATTACCACTCCTTC
ACGTCGATACTCAGCGGTCTTTACAAGTACAGCACGTCCCACTCGACCTT
CACGCACACCGACAGCGCCACCAACCGGATGACGCTGACTCCGGTGCTGC
CCCCTGCACTAGCGTACCTGCTGGACCCGACAGAGAACTTTGTGGCCTAC
CGGCAGGAGTTCCAAACATCGCCGGGCCTCCCTTTCCTCTTCCCGCACAT
TAGGGAGTACCAACAGCACGGCCCGCCAGCCCTGCACCAACTGTTCCAGC
AATTGCAACGTCAGGTACCCACCAACTAG back to topCoding sequence (CDS) from alignment at MCQH01000164:61037..62565- >ATCC10864_005886-T1 ID=ATCC10864_005886-T1|Name=ATCC10864_005886-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4248bp|location=Sequence derived from alignment at MCQH01000164:61037..62565- (Aspergillus niger ATCC 10864)
GCCCTCTACACCTGCCGCAATTACCACTCCTTCACGTCGATACTCAGCGG
TCTTTACAAGTACAGCACGTCCCACTCGACCTTCACGCACACCGACAGCG
CCACCAACCGGATGACGCTGACTCCGGTGCTGCCCCCTGCACTAGCGTAC
CTGCTGGACCCGACAGAGAACTTTGTGGCCTACCGGCAGGAGTTCCAAAC
ATCGCCGGGCCTCCCTTTCCTCTTCCCGCACATTAGGGAGTACCAACAGC
ACGGCCCGCCAGCCCTGCACCAACTGTTCCAGCAATTGCAACGTCAGGTA
CCCACCAACTAGCATCTTCAGACTCGCAGCCCTTTTGCCCACCGTGCCGT
AAACCGGTGCCTACACGCCATGAGACAGCCAGTACCAGCCAGTCCGCCGT
ACCCGGGCTTCCAGTTCATAGCAGCGCCTATCCAGCAGCTATTCAAAGAG
CATTTACCGAGTCTGAAGGCCATTCTGCTTGAGCTCTCAGTACTAGGGGT
ACGGTTTACCCGAACATACGTCCACGCCCGAGAGATGAACTGGACGAAGC
CATTTTCGGTCGAAATCCCCCTGCTAGATGAGTTGGATTTGACGAACCCA
GCCCCAGCTCTCGATTTTGCCAAGACAACAACCGCTGTCGACGAAGAGTA
CTTCTCAGGACTGAGCCATAAAAGCTTCGTGGAACCCGATGCCATAATCA
AACGACTCCTTGTGCTATGGGAGCTACGCAGCCTGGAAGTGTGGGAATGT
TGCACGGGACTACCAGACATGATAGGCTACATTCAGGAAATTGTCGAGAT
GTCTGCGTATTCACCTTCGGCCGGCGTGCCGTTCCCGTGCATGTCGGGGC
AGCCTTCCTACCTGGAACTGTTTCCCTCGGGCGAGATTCCCCATACCTTT
TTCACGTATCAGTGGTGGGAGGACGAGGCCACCACTGTGTTCTGGGCCTT
CGATCCCCATGAGATCAAGCGGGTGATCCGATTCGGACTGTTTCGAGACA
ACAACCTCCCGCGGAAGTCTCTTCAGAAACGCGATCCTCAAGCCATTACC
GCGTTCCTGTACTCGCTCGTGGAGCCGCATGAGATGGCATTTATCGACAA
TCTGTCCCATTATCAGAAGGTCGAGGAGATTATCCGACGATGTCAGATCT
CCGGTCCTCCTCTCGAGCCTTGGAGCTGGCTTCCTACCAAGCGAGATAGT
GACCTGCCCTCGATAGCAATAGCAGAAGCCATCGACACAGAGAGTCATCT
TCATTTCACGCGAATATCGTTCGAGGAACTGGTCCGCTACTTCCTGGGCT
ACCGAGCACCCTCGGTAGAGTGGTTTTTACAACAGCATACAGCGCTTTAC
ATCCACCTGCTCAACTATCTGCAAATGTTCCCAGAGGAGCTGGGGAAGTA
CAAGGAGGTTGAACAGGCCCTCTACACCTGCCGCAATTACCACTCCTTCA
CGTCGATACTCAGCGGTCTTTACAAGTACAGCACGTCCCACTCGACCTTC
ACGCACACCGACAGCGCCACCAACCGGATGACGCTGACTCCGGTGCTGCC
CCCTGCACTAGCGTACCTGCTGGACCCGACAGAGAACTTTGTGGCCTACC
GGCAGGAGTTCCAAACATCGCCGGGCCTCCCTTTCCTCTTCCCGCACATT
AGGGAGTACCAACAGCACGGCCCGCCAGCCCTGCACCAACTGTTCCAGCA
ATTGCAACGTCAGGTACCCACCAACTAGCATCTTCAGACTCGCAGCCCTT
TTGCCCACCGTGCCGTAAACCGGTGCCTACACGCCATGAGACAGCCAGTA
CCAGCCAGTCCGCCGTACCCGGGCTTCCAGTTCATAGCAGCGCCTATCCA
GCAGCTATTCAAAGAGCATTTACCGAGTCTGAAGGCCATTCTGCTTGAGC
TCTCAGTACTAGGGGTACGGTTTACCCGAACATACGTCCACGCCCGAGAG
ATGAACTGGACGAAGCCATTTTCGGTCGAAATCCCCCTGCTAGATGAGTT
GGATTTGACGAACCCAGCCCCAGCTCTCGATTTTGCCAAGACAACAACCG
CTGTCGACGAAGAGTACTTCTCAGGACTGAGCCATAAAAGCTTCGTGGAA
CCCGATGCCATAATCAAACGACTCCTTGTGCTATGGGAGCTACGCAGCCT
GGAAGTGTGGGAATGTTGCACGGGACTACCAGACATGATAGGCTACATTC
AGGAAATTGTCGAGATGTCTGCGTATTCACCTTCGGCCGGCGTGCCGTTC
CCGTGCATGTCGGGGCAGCCTTCCTACCTGGAACTGTTTCCCTCGGGCGA
GATTCCCCATACCTTTTTCACGTATCAGTGGTGGGAGGACGAGGCCACCA
CTGTGTTCTGGGCCTTCGATCCCCATGAGATCAAGCGGGTGATCCGATTC
GGACTGTTTCGAGACAACAACCTCCCGCGGAAGTCTCTTCAGAAACGCGA
TCCTCAAGCCATTACCGCGTTCCTGTACTCGCTCGTGGAGCCGCATGAGA
TGGCATTTATCGACAATCTGTCCCATTATCAGAAGGTCGAGGAGATTATC
CGACGATGTCAGATCTCCGGTCCTCCTCTCGAGCCTTGGAGCTGGCTTCC
TACCAAGCGAGATAGTGACCTGCCCTCGATAGCAATAGCAGAAGCCATCG
ACACAGAGAGTCATCTTCATTTCACGCGAATATCGTTCGAGGAACTGGTC
CGCTACTTCCTGGGCTACCGAGCACCCTCGGTAGAGTGGTTTTTACAACA
GCATACAGCGCTTTACATCCACCTGCTCAACTATCTGCAAATGTTCCCAG
AGGAGCTGGGGAAGTACAAGGAGGTTGAACAGGCCCTCTACACCTGCCGC
AATTACCACTCCTTCACGTCGATACTCAGCGGTCTTTACAAGTACAGCAC
GTCCCACTCGACCTTCACGCACACCGACAGCGCCACCAACCGGATGACGC
TGACTCCGGTGCTGCCCCCTGCACTAGCGTACCTGCTGGACCCGACAGAG
AACTTTGTGGCCTACCGGCAGGAGTTCCAAACATCGCCGGGCCTCCCTTT
CCTCTTCCCGCACATTAGGGAGTACCAACAGCACGGCCCGCCAGCCCTGC
ACCAACTGTTCCAGCAATTGCAACGTCAGGTACCCACCAACTAGCATCTT
CAGACTCGCAGCCCTTTTGCCCACCGTGCCGTAAACCGGTGCCTACACGC
CATGAGACAGCCAGTACCAGCCAGTCCGCCGTACCCGGGCTTCCAGTTCA
TAGCAGCGCCTATCCAGCAGCTATTCAAAGAGCATTTACCGAGTCTGAAG
GCCATTCTGCTTGAGCTCTCAGTACTAGGGGTACGGTTTACCCGAACATA
CGTCCACGCCCGAGAGATGAACTGGACGAAGCCATTTTCGGTCGAAATCC
CCCTGCTAGATGAGTTGGATTTGACGAACCCAGCCCCAGCTCTCGATTTT
GCCAAGACAACAACCGCTGTCGACGAAGAGTACTTCTCAGGACTGAGCCA
TAAAAGCTTCGTGGAACCCGATGCCATAATCAAACGACTCCTTGTGCTAT
GGGAGCTACGCAGCCTGGAAGTGTGGGAATGTTGCACGGGACTACCAGAC
ATGATAGGCTACATTCAGGAAATTGTCGAGATGTCTGCGTATTCACCTTC
GGCCGGCGTGCCGTTCCCGTGCATGTCGGGGCAGCCTTCCTACCTGGAAC
TGTTTCCCTCGGGCGAGATTCCCCATACCTTTTTCACGTATCAGTGGTGG
GAGGACGAGGCCACCACTGTGTTCTGGGCCTTCGATCCCCATGAGATCAA
GCGGGTGATCCGATTCGGACTGTTTCGAGACAACAACCTCCCGCGGAAGT
CTCTTCAGAAACGCGATCCTCAAGCCATTACCGCGTTCCTGTACTCGCTC
GTGGAGCCGCATGAGATGGCATTTATCGACAATCTGTCCCATTATCAGAA
GGTCGAGGAGATTATCCGACGATGTCAGATCTCCGGTCCTCCTCTCGAGC
CTTGGAGCTGGCTTCCTACCAAGCGAGATAGTGACCTGCCCTCGATAGCA
ATAGCAGAAGCCATCGACACAGAGAGTCATCTTCATTTCACGCGAATATC
GTTCGAGGAACTGGTCCGCTACTTCCTGGGCTACCGAGCACCCTCGGTAG
AGTGGTTTTTACAACAGCATACAGCGCTTTACATCCACCTGCTCAACTAT
CTGCAAATGTTCCCAGAGGAGCTGGGGAAGTACAAGGAGGTTGAACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005085 | guanyl-nucleotide exchange factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR036964 |
| InterPro | IPR023578 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000164 | supercontig | MCQH01000164:61037..62565 - |
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