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ATCC10864_005895-T1, ATCC10864_005895-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005895-T1
Unique NameATCC10864_005895-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:92945..94239-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005895-T1 ID=ATCC10864_005895-T1|Name=ATCC10864_005895-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1295bp|location=Sequence derived from alignment at MCQH01000164:92945..94239- (Aspergillus niger ATCC 10864)
ATGCCTAGCCAACCGCCCCTCCCACCCCTCCTCACTCCCTACGTATCGTC
TCTGCCGCCGTCGTCCCTCACAGTCCTATCCTCAGTCCTCGGCGCAACAG
GGAATTGGCTAGTTCTTCGATTTCTATATGCTGCCCTGAATTCGTCTTCG
ACGTCAGACGCTGTTGCGGGCCTCAGCGACACTAACAATGGGAGAAAGAG
AAAGGTCGTGCTCGTGAGTTTTCTGCGGGGTTGGGAATTTTGGAGGTCCG
AGGCCAAGAGATTGGTATGTTTGTGAACATCCTTCACGTCGCTCCATGTG
GTCTTATGGGCTATCCAGGCCTTGTGGGGAATTTGGTAGTTCAAATTCCT
CGCAAATTCATCTATCTGCTGTCAATTTACTCAAATAACTGGCAACAATA
CTGACCCGACCAGGGCCTCGACCTTGCCCGCCTCACAGACAAACGCCAGT
TCGCCTTCGTTGACGGACTCTCCGAACTCTTCGCTGCTCCCCCTAGCACT
TCGTCCCAAACACCAATATCACAAGCCTCACTACGAGGAACAGTGCCACC
CCGGACAGTCCTGCCTCTCAGGTCGCAGCCCGGTCCCATTCCCGCGCGAG
GACCGCAACCCGCCGCTCGGCCAGTCGCTGCCCCTCCGAACCCTCCAACA
TCGAGAGAAGTCGGGCCAGTCAAGCGACTTCACCTATCAGGAAATGGGAA
TGCAGCTTTGGATGCGCTCGAGAAAGACATTGCGGCGGTGATCAATGACC
TGAAATCATCAACATCCGGAGATGAACAGGAAGAGCCCGAGGTTTTATTG
GTTCTCGATCAACCGGATCTGCTACTAGCCGCTACGGGCCCGAGCAGGGG
CATAGGCGCTACAGAGATGGGAGATTGGGTGATGGGGCTACAACAGGTAT
GCTACGAGTCTCCACAGGCAGTCTTTGAACGGGAACCATATCCGCTGACC
GCGAGCTTATTCGCCTAGTACGCTCATGCAACAGTCATGACGGTGTCTTC
AGACTCCCCGTTGATCCACAATGCTTCCGCATCGGCACACCAGGGAGCAA
CTCCGCTGGAGACTGAGCATGCCGCGTTTGCTATCGGGTCGGCTCATCGG
GCGCACATGGTTATGCAGCTCCGAAACCTTGAAACGGGTGCCGCAAGGGA
TGTCAGCGGTGTGCTGAGGGTCAGCAAAGGTGGCGCGTGGGGGCAAAATG
ACAGCACCGAGGCCAGTAGTCACTGGGAAGAGAAGGAAGTTCTATACTTT
GTCCAGAGGGATGGTGGCGTGAGCGTCTTCGGGCGAGGTGAATAG
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Coding sequence (CDS) from alignment at MCQH01000164:92945..94239-

>ATCC10864_005895-T1 ID=ATCC10864_005895-T1|Name=ATCC10864_005895-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3222bp|location=Sequence derived from alignment at MCQH01000164:92945..94239- (Aspergillus niger ATCC 10864)
TACGCTCATGCAACAGTCATGACGGTGTCTTCAGACTCCCCGTTGATCCA
CAATGCTTCCGCATCGGCACACCAGGGAGCAACTCCGCTGGAGACTGAGC
ATGCCGCGTTTGCTATCGGGTCGGCTCATCGGGCGCACATGGTTATGCAG
CTCCGAAACCTTGAAACGGGTGCCGCAAGGGATGTCAGCGGTGTGCTGAG
GGTCAGCAAAGGTGGCGCGTGGGGGCAAAATGACAGCACCGAGGCCAGTA
GTCACTGGGAAGAGAAGGAAGTTCTATACTTTGTCCAGAGGGATGGTGGC
GTGAGCGTCTTCGGGCGAGGTGAATAGGGCCTCGACCTTGCCCGCCTCAC
AGACAAACGCCAGTTCGCCTTCGTTGACGGACTCTCCGAACTCTTCGCTG
CTCCCCCTAGCACTTCGTCCCAAACACCAATATCACAAGCCTCACTACGA
GGAACAGTGCCACCCCGGACAGTCCTGCCTCTCAGGTCGCAGCCCGGTCC
CATTCCCGCGCGAGGACCGCAACCCGCCGCTCGGCCAGTCGCTGCCCCTC
CGAACCCTCCAACATCGAGAGAAGTCGGGCCAGTCAAGCGACTTCACCTA
TCAGGAAATGGGAATGCAGCTTTGGATGCGCTCGAGAAAGACATTGCGGC
GGTGATCAATGACCTGAAATCATCAACATCCGGAGATGAACAGGAAGAGC
CCGAGGTTTTATTGGTTCTCGATCAACCGGATCTGCTACTAGCCGCTACG
GGCCCGAGCAGGGGCATAGGCGCTACAGAGATGGGAGATTGGGTGATGGG
GCTACAACAGATGCCTAGCCAACCGCCCCTCCCACCCCTCCTCACTCCCT
ACGTATCGTCTCTGCCGCCGTCGTCCCTCACAGTCCTATCCTCAGTCCTC
GGCGCAACAGGGAATTGGCTAGTTCTTCGATTTCTATATGCTGCCCTGAA
TTCGTCTTCGACGTCAGACGCTGTTGCGGGCCTCAGCGACACTAACAATG
GGAGAAAGAGAAAGGTCGTGCTCGTGAGTTTTCTGCGGGGTTGGGAATTT
TGGAGGTCCGAGGCCAAGAGATTGTACGCTCATGCAACAGTCATGACGGT
GTCTTCAGACTCCCCGTTGATCCACAATGCTTCCGCATCGGCACACCAGG
GAGCAACTCCGCTGGAGACTGAGCATGCCGCGTTTGCTATCGGGTCGGCT
CATCGGGCGCACATGGTTATGCAGCTCCGAAACCTTGAAACGGGTGCCGC
AAGGGATGTCAGCGGTGTGCTGAGGGTCAGCAAAGGTGGCGCGTGGGGGC
AAAATGACAGCACCGAGGCCAGTAGTCACTGGGAAGAGAAGGAAGTTCTA
TACTTTGTCCAGAGGGATGGTGGCGTGAGCGTCTTCGGGCGAGGTGAATA
GGGCCTCGACCTTGCCCGCCTCACAGACAAACGCCAGTTCGCCTTCGTTG
ACGGACTCTCCGAACTCTTCGCTGCTCCCCCTAGCACTTCGTCCCAAACA
CCAATATCACAAGCCTCACTACGAGGAACAGTGCCACCCCGGACAGTCCT
GCCTCTCAGGTCGCAGCCCGGTCCCATTCCCGCGCGAGGACCGCAACCCG
CCGCTCGGCCAGTCGCTGCCCCTCCGAACCCTCCAACATCGAGAGAAGTC
GGGCCAGTCAAGCGACTTCACCTATCAGGAAATGGGAATGCAGCTTTGGA
TGCGCTCGAGAAAGACATTGCGGCGGTGATCAATGACCTGAAATCATCAA
CATCCGGAGATGAACAGGAAGAGCCCGAGGTTTTATTGGTTCTCGATCAA
CCGGATCTGCTACTAGCCGCTACGGGCCCGAGCAGGGGCATAGGCGCTAC
AGAGATGGGAGATTGGGTGATGGGGCTACAACAGATGCCTAGCCAACCGC
CCCTCCCACCCCTCCTCACTCCCTACGTATCGTCTCTGCCGCCGTCGTCC
CTCACAGTCCTATCCTCAGTCCTCGGCGCAACAGGGAATTGGCTAGTTCT
TCGATTTCTATATGCTGCCCTGAATTCGTCTTCGACGTCAGACGCTGTTG
CGGGCCTCAGCGACACTAACAATGGGAGAAAGAGAAAGGTCGTGCTCGTG
AGTTTTCTGCGGGGTTGGGAATTTTGGAGGTCCGAGGCCAAGAGATTGTA
CGCTCATGCAACAGTCATGACGGTGTCTTCAGACTCCCCGTTGATCCACA
ATGCTTCCGCATCGGCACACCAGGGAGCAACTCCGCTGGAGACTGAGCAT
GCCGCGTTTGCTATCGGGTCGGCTCATCGGGCGCACATGGTTATGCAGCT
CCGAAACCTTGAAACGGGTGCCGCAAGGGATGTCAGCGGTGTGCTGAGGG
TCAGCAAAGGTGGCGCGTGGGGGCAAAATGACAGCACCGAGGCCAGTAGT
CACTGGGAAGAGAAGGAAGTTCTATACTTTGTCCAGAGGGATGGTGGCGT
GAGCGTCTTCGGGCGAGGTGAATAGGGCCTCGACCTTGCCCGCCTCACAG
ACAAACGCCAGTTCGCCTTCGTTGACGGACTCTCCGAACTCTTCGCTGCT
CCCCCTAGCACTTCGTCCCAAACACCAATATCACAAGCCTCACTACGAGG
AACAGTGCCACCCCGGACAGTCCTGCCTCTCAGGTCGCAGCCCGGTCCCA
TTCCCGCGCGAGGACCGCAACCCGCCGCTCGGCCAGTCGCTGCCCCTCCG
AACCCTCCAACATCGAGAGAAGTCGGGCCAGTCAAGCGACTTCACCTATC
AGGAAATGGGAATGCAGCTTTGGATGCGCTCGAGAAAGACATTGCGGCGG
TGATCAATGACCTGAAATCATCAACATCCGGAGATGAACAGGAAGAGCCC
GAGGTTTTATTGGTTCTCGATCAACCGGATCTGCTACTAGCCGCTACGGG
CCCGAGCAGGGGCATAGGCGCTACAGAGATGGGAGATTGGGTGATGGGGC
TACAACAGATGCCTAGCCAACCGCCCCTCCCACCCCTCCTCACTCCCTAC
GTATCGTCTCTGCCGCCGTCGTCCCTCACAGTCCTATCCTCAGTCCTCGG
CGCAACAGGGAATTGGCTAGTTCTTCGATTTCTATATGCTGCCCTGAATT
CGTCTTCGACGTCAGACGCTGTTGCGGGCCTCAGCGACACTAACAATGGG
AGAAAGAGAAAGGTCGTGCTCGTGAGTTTTCTGCGGGGTTGGGAATTTTG
GAGGTCCGAGGCCAAGAGATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033588Elongator holoenzyme complex
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005895ATCC10864_005895Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005895-T1ATCC10864_005895-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005895-T1.cdsATCC10864_005895-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005895-T1.exon3ATCC10864_005895-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005895-T1.exon2ATCC10864_005895-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005895-T1.exon1ATCC10864_005895-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018627
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:92945..94239 -
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