You are here

Home

ATCC10864_005916-T1, ATCC10864_005916-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005916-T1
Unique NameATCC10864_005916-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:154171..155421+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005916-T1 ID=ATCC10864_005916-T1|Name=ATCC10864_005916-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1251bp|location=Sequence derived from alignment at MCQH01000164:154171..155421+ (Aspergillus niger ATCC 10864)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCTACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACTGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGTATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGC
AGAGTATTGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATT
ACGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGA
GCATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCG
GGCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTT
CATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTT
CCTCTACTGTGCTTCTGGACCGTTGGTGCGCAGTTCTTATAAGGCTGGTG
AGGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGAT
GCTGTTGCCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTG
A
back to top

Coding sequence (CDS) from alignment at MCQH01000164:154171..155421+

>ATCC10864_005916-T1 ID=ATCC10864_005916-T1|Name=ATCC10864_005916-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1251bp|location=Sequence derived from alignment at MCQH01000164:154171..155421+ (Aspergillus niger ATCC 10864)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCTACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACTGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGTATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGC
AGAGTATTGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATT
ACGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGA
GCATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCG
GGCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTT
CATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTT
CCTCTACTGTGCTTCTGGACCGTTGGTGCGCAGTTCTTATAAGGCTGGTG
AGGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGAT
GCTGTTGCCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTG
A
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009107lipoate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0016992lipoate synthase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005916ATCC10864_005916Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005916-T1.exon1ATCC10864_005916-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005916-T1.cdsATCC10864_005916-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005916-T1ATCC10864_005916-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007197
PFAMPF04055
InterProIPR031691
InterProIPR003698
InterProIPR013785
PFAMPF16881
InterProIPR006638
Properties
Property NameValue
NoteBUSCO:EOG0926131E
NoteantiSMASH:Cluster_1000164.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:154171..155421 +
Powered by Drupal