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ATCC10864_005944-T1, ATCC10864_005944-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005944-T1
Unique NameATCC10864_005944-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:223637..224598-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005944-T1 ID=ATCC10864_005944-T1|Name=ATCC10864_005944-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=962bp|location=Sequence derived from alignment at MCQH01000164:223637..224598- (Aspergillus niger ATCC 10864)
ATGGCCACTGGTCCAGCTACTCAATCCCTCAAGGTCAGCATCATCCACCT
GCGTGTCCGTCTGTCAGATTGCGGCTAACGGAGCGCTGGTGCACACAGTG
TGTGGTGACGGGTGATGGTGCGGTAGGAAAAGTATGTTGCTCCCCTTTCA
GCCAGCTCGACCTCTCTCTCCCTCCCCCTCCCTCCCCCCTCTCGCTTCCT
AGATCGGTCGATTTCGTTATCGCTGTTGCTAATCGAACGATAGACATGTC
TCCTGATTTCGTACACGACCAACGCTTTCCCCGGCGAATATATCCCTACC
GTGTCCGTACCCCCCTTGGACCCTGATACTCCTCGTCTGATGCGGACCTC
GTGTGTTGACCGGATTCCCGCAGATTTGATAACTACACCGCTAGTGTCAT
GGTAGATGGCCGACCGATTAGCTTGGGACTCTGGGATACTGCTGGACAGG
AAGATTACGACCGTCTTCGCCCATTGTCCTACCCGCAAACCGACGTCTTC
CTGATCTGCTTCTCCATCGTTAGCCCGCCGTCCTTTGACAACGTTAAAGC
CAAGGTGCTTCCTTCACCATCCCTATCGACCGGAGACCCGCTTACTGACC
CTGACGGATGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCC
CCATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACC
ATAGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGC
TCTGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGG
CCCTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGGTAT
GTTCGAACAAACCCATATACTACTGGAATTGGGGGACTAACGTTCACATA
GCGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGC
GTGATTCTGTAG
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Coding sequence (CDS) from alignment at MCQH01000164:223637..224598-

>ATCC10864_005944-T1 ID=ATCC10864_005944-T1|Name=ATCC10864_005944-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3600bp|location=Sequence derived from alignment at MCQH01000164:223637..224598- (Aspergillus niger ATCC 10864)
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAC1ATCC10864_005944Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005944-T1ATCC10864_005944-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005944-T1.cdsATCC10864_005944-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005944-T1.exon6ATCC10864_005944-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_005944-T1.exon5ATCC10864_005944-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_005944-T1.exon4ATCC10864_005944-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005944-T1.exon3ATCC10864_005944-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005944-T1.exon2ATCC10864_005944-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005944-T1.exon1ATCC10864_005944-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027417
PFAMPF00025
PFAMPF00071
InterProIPR003578
InterProIPR001806
PFAMPF08477
InterProIPR005225
Properties
Property NameValue
ProductRho GTPase protein rac1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:223637..224598 -
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