You are here

Home

ATCC10864_005959-T1, ATCC10864_005959-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005959-T1
Unique NameATCC10864_005959-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:264355..266249-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005959-T1 ID=ATCC10864_005959-T1|Name=ATCC10864_005959-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1895bp|location=Sequence derived from alignment at MCQH01000164:264355..266249- (Aspergillus niger ATCC 10864)
ATGTTTGACATCCTCGAGGCCGATATCGTCGTCTTTCAGGAAACAAAAAT
CCAGCGCAAAGACTTGCGCGATGACATGGTCCTAGTGCCTGGTTGGGATT
GCTATTTTAGTCTGCCTAGAGTCAAAAAAGGTATGTGCGATATGTCTCTT
AATGACTGCTGGATCTGACCAACTACCGTAGGTTATTCGGGGGTCGTAAT
CTACACACGCAATGCCACATGTGCTCCCATTCGCGCCGAGGAAGGTCTTT
CGGGGATGCTATGCCCCCCGAACTCGTCGGTCTCTTTTCGGGAACTCCCT
GAGAATCAGCAGATCGGTGGTTATCCTACCATCGAGCAGTTGTCACAGCT
TGAAGTTGACGCAGCTACCCTAGACTCTGAGGGACGTTGTGTCATTCTCG
AGTTTCCCGCCTTTGTCCTGCTGGGCATCTATTCACCGGCCAATCGGGAC
GAGAGCCGCGACTCTTTTCGCCGCAGTTTCATTGACCTGATGGACGCGCG
GATCCGTAATTTAGTAGCTATGGGAAAGAGGGTGTTTGTGACAGGGGACT
TAAATATCTCGCGGGGCGAGATCGATGCAGCTCATGCGGGGGAGGCTATC
AGAAAAGGAACGTTGACAGAAGACGAGTTCGTGTCCACTCATGCACGGCG
TGTGCTCAATCAGTTGCTATCAGATGGAAAGGTAATTGGGGAGCGCGAAG
AAGGAAGGGAACAGCCCGTTCTACATGATATCTGTCGCTCTTTTCACCCG
GGCCGTAAGGGAATGTACACCTGCTGGGAGCAGCGCATCAATGCTCGTCC
TGGAAATTATGGCTCAAGAATTGACTATGTCTTGTGTAGCTTGGATATGC
AAGAGTGGTTCTGCGATTCAAACATACAAGAAGGCCTCATGGTACCATAG
TCTTCCCTGACCTAAGAAAAAGCTTGCTAATCATGACTGCACAGGGTTCC
GACCATTGTCCAGTGTATGCGATGTTCAAAGAAACCGTCAATATTGGAGG
AAAGCAACTTAACATCCGGGACATCATGAATCCGCCTGGAATGTTCGAAA
ATGGCGAGCGTCGACAGGAGTATACGGCGAAGTATCTATTACCGACTTCG
GGCCGCTTGATTCCGGAGTTTGACAAACGAAGGAGCATCAAGGACATGTT
CACGCGCAGACCCAGCAACGCCCCGCAGAGCTCGCCAGCTAGCACCCCTA
CGCTCTCTCGTGCGAATTCGAGTCATGAGGATTCGACAGCTGCCATCGAA
AAGCCCCCAACGGTAGCAGTCGCCAGCCCCGCCATTCCCAAGAACGATCC
CCAACCGAAGGGAATTGTCCGTAAACGGTCCGAGAAGAACGACTCCCCTG
TTAAACGCCCAAAATCAGTTGCTGGCTTGGCACCTGCGCCGGCGATTGCT
GGACAGAAAACGCTGAAGGGCTTCTTCAAGCCGAAGAGTTCTCCAGCCAT
TCAGAGCCGTGAGCATCCAACGAACGACCATGGAGTATGTGCCATGCGAC
TACCTGCATCCCCATCCAAGATTGTTTCCTCGGCAGAGTCAAAAGCACTA
GACGAGGAGCAAACTGCGGCGGTCGTGACTACAGACTCCATAAAGGAGAC
CAATCCACCGGTGTCGACGACATCAGACACCCCCACAGATGATGACACAT
TCGTCGACCCAATCGCGAGCAAGGAAGATTGGTCGAAGCTATTCTCCAAA
AAGCGCGCCCCTCTTTGCGAGGGCCACCAGGAGCCATGCATTAGTCTGAC
AACTAAAAAGCCTGGCATCAACTGTGGCCGGTCCTTTTGGATTTGTCCTC
GGCCTCTTGGACCCAGCGGCAACAAGGAGAAAGGTACGCAATGGCGCTGT
CCGACATTTATTTGGGCAAGTGATTGGAATTCTTCGGCATCGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000164:264355..266249-

>ATCC10864_005959-T1 ID=ATCC10864_005959-T1|Name=ATCC10864_005959-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5373bp|location=Sequence derived from alignment at MCQH01000164:264355..266249- (Aspergillus niger ATCC 10864)
GGTTCCGACCATTGTCCAGTGTATGCGATGTTCAAAGAAACCGTCAATAT
TGGAGGAAAGCAACTTAACATCCGGGACATCATGAATCCGCCTGGAATGT
TCGAAAATGGCGAGCGTCGACAGGAGTATACGGCGAAGTATCTATTACCG
ACTTCGGGCCGCTTGATTCCGGAGTTTGACAAACGAAGGAGCATCAAGGA
CATGTTCACGCGCAGACCCAGCAACGCCCCGCAGAGCTCGCCAGCTAGCA
CCCCTACGCTCTCTCGTGCGAATTCGAGTCATGAGGATTCGACAGCTGCC
ATCGAAAAGCCCCCAACGGTAGCAGTCGCCAGCCCCGCCATTCCCAAGAA
CGATCCCCAACCGAAGGGAATTGTCCGTAAACGGTCCGAGAAGAACGACT
CCCCTGTTAAACGCCCAAAATCAGTTGCTGGCTTGGCACCTGCGCCGGCG
ATTGCTGGACAGAAAACGCTGAAGGGCTTCTTCAAGCCGAAGAGTTCTCC
AGCCATTCAGAGCCGTGAGCATCCAACGAACGACCATGGAGTATGTGCCA
TGCGACTACCTGCATCCCCATCCAAGATTGTTTCCTCGGCAGAGTCAAAA
GCACTAGACGAGGAGCAAACTGCGGCGGTCGTGACTACAGACTCCATAAA
GGAGACCAATCCACCGGTGTCGACGACATCAGACACCCCCACAGATGATG
ACACATTCGTCGACCCAATCGCGAGCAAGGAAGATTGGTCGAAGCTATTC
TCCAAAAAGCGCGCCCCTCTTTGCGAGGGCCACCAGGAGCCATGCATTAG
TCTGACAACTAAAAAGCCTGGCATCAACTGTGGCCGGTCCTTTTGGATTT
GTCCTCGGCCTCTTGGACCCAGCGGCAACAAGGAGAAAGGTACGCAATGG
CGCTGTCCGACATTTATTTGGGCAAGTGATTGGAATTCTTCGGCATCGTA
GGTTATTCGGGGGTCGTAATCTACACACGCAATGCCACATGTGCTCCCAT
TCGCGCCGAGGAAGGTCTTTCGGGGATGCTATGCCCCCCGAACTCGTCGG
TCTCTTTTCGGGAACTCCCTGAGAATCAGCAGATCGGTGGTTATCCTACC
ATCGAGCAGTTGTCACAGCTTGAAGTTGACGCAGCTACCCTAGACTCTGA
GGGACGTTGTGTCATTCTCGAGTTTCCCGCCTTTGTCCTGCTGGGCATCT
ATTCACCGGCCAATCGGGACGAGAGCCGCGACTCTTTTCGCCGCAGTTTC
ATTGACCTGATGGACGCGCGGATCCGTAATTTAGTAGCTATGGGAAAGAG
GGTGTTTGTGACAGGGGACTTAAATATCTCGCGGGGCGAGATCGATGCAG
CTCATGCGGGGGAGGCTATCAGAAAAGGAACGTTGACAGAAGACGAGTTC
GTGTCCACTCATGCACGGCGTGTGCTCAATCAGTTGCTATCAGATGGAAA
GGTAATTGGGGAGCGCGAAGAAGGAAGGGAACAGCCCGTTCTACATGATA
TCTGTCGCTCTTTTCACCCGGGCCGTAAGGGAATGTACACCTGCTGGGAG
CAGCGCATCAATGCTCGTCCTGGAAATTATGGCTCAAGAATTGACTATGT
CTTGTGTAGCTTGGATATGCAAGAGTGGTTCTGCGATTCAAACATACAAG
AAGGCCTCATGATGTTTGACATCCTCGAGGCCGATATCGTCGTCTTTCAG
GAAACAAAAATCCAGCGCAAAGACTTGCGCGATGACATGGTCCTAGTGCC
TGGTTGGGATTGCTATTTTAGTCTGCCTAGAGTCAAAAAAGGGTTCCGAC
CATTGTCCAGTGTATGCGATGTTCAAAGAAACCGTCAATATTGGAGGAAA
GCAACTTAACATCCGGGACATCATGAATCCGCCTGGAATGTTCGAAAATG
GCGAGCGTCGACAGGAGTATACGGCGAAGTATCTATTACCGACTTCGGGC
CGCTTGATTCCGGAGTTTGACAAACGAAGGAGCATCAAGGACATGTTCAC
GCGCAGACCCAGCAACGCCCCGCAGAGCTCGCCAGCTAGCACCCCTACGC
TCTCTCGTGCGAATTCGAGTCATGAGGATTCGACAGCTGCCATCGAAAAG
CCCCCAACGGTAGCAGTCGCCAGCCCCGCCATTCCCAAGAACGATCCCCA
ACCGAAGGGAATTGTCCGTAAACGGTCCGAGAAGAACGACTCCCCTGTTA
AACGCCCAAAATCAGTTGCTGGCTTGGCACCTGCGCCGGCGATTGCTGGA
CAGAAAACGCTGAAGGGCTTCTTCAAGCCGAAGAGTTCTCCAGCCATTCA
GAGCCGTGAGCATCCAACGAACGACCATGGAGTATGTGCCATGCGACTAC
CTGCATCCCCATCCAAGATTGTTTCCTCGGCAGAGTCAAAAGCACTAGAC
GAGGAGCAAACTGCGGCGGTCGTGACTACAGACTCCATAAAGGAGACCAA
TCCACCGGTGTCGACGACATCAGACACCCCCACAGATGATGACACATTCG
TCGACCCAATCGCGAGCAAGGAAGATTGGTCGAAGCTATTCTCCAAAAAG
CGCGCCCCTCTTTGCGAGGGCCACCAGGAGCCATGCATTAGTCTGACAAC
TAAAAAGCCTGGCATCAACTGTGGCCGGTCCTTTTGGATTTGTCCTCGGC
CTCTTGGACCCAGCGGCAACAAGGAGAAAGGTACGCAATGGCGCTGTCCG
ACATTTATTTGGGCAAGTGATTGGAATTCTTCGGCATCGTAGGTTATTCG
GGGGTCGTAATCTACACACGCAATGCCACATGTGCTCCCATTCGCGCCGA
GGAAGGTCTTTCGGGGATGCTATGCCCCCCGAACTCGTCGGTCTCTTTTC
GGGAACTCCCTGAGAATCAGCAGATCGGTGGTTATCCTACCATCGAGCAG
TTGTCACAGCTTGAAGTTGACGCAGCTACCCTAGACTCTGAGGGACGTTG
TGTCATTCTCGAGTTTCCCGCCTTTGTCCTGCTGGGCATCTATTCACCGG
CCAATCGGGACGAGAGCCGCGACTCTTTTCGCCGCAGTTTCATTGACCTG
ATGGACGCGCGGATCCGTAATTTAGTAGCTATGGGAAAGAGGGTGTTTGT
GACAGGGGACTTAAATATCTCGCGGGGCGAGATCGATGCAGCTCATGCGG
GGGAGGCTATCAGAAAAGGAACGTTGACAGAAGACGAGTTCGTGTCCACT
CATGCACGGCGTGTGCTCAATCAGTTGCTATCAGATGGAAAGGTAATTGG
GGAGCGCGAAGAAGGAAGGGAACAGCCCGTTCTACATGATATCTGTCGCT
CTTTTCACCCGGGCCGTAAGGGAATGTACACCTGCTGGGAGCAGCGCATC
AATGCTCGTCCTGGAAATTATGGCTCAAGAATTGACTATGTCTTGTGTAG
CTTGGATATGCAAGAGTGGTTCTGCGATTCAAACATACAAGAAGGCCTCA
TGATGTTTGACATCCTCGAGGCCGATATCGTCGTCTTTCAGGAAACAAAA
ATCCAGCGCAAAGACTTGCGCGATGACATGGTCCTAGTGCCTGGTTGGGA
TTGCTATTTTAGTCTGCCTAGAGTCAAAAAAGGGTTCCGACCATTGTCCA
GTGTATGCGATGTTCAAAGAAACCGTCAATATTGGAGGAAAGCAACTTAA
CATCCGGGACATCATGAATCCGCCTGGAATGTTCGAAAATGGCGAGCGTC
GACAGGAGTATACGGCGAAGTATCTATTACCGACTTCGGGCCGCTTGATT
CCGGAGTTTGACAAACGAAGGAGCATCAAGGACATGTTCACGCGCAGACC
CAGCAACGCCCCGCAGAGCTCGCCAGCTAGCACCCCTACGCTCTCTCGTG
CGAATTCGAGTCATGAGGATTCGACAGCTGCCATCGAAAAGCCCCCAACG
GTAGCAGTCGCCAGCCCCGCCATTCCCAAGAACGATCCCCAACCGAAGGG
AATTGTCCGTAAACGGTCCGAGAAGAACGACTCCCCTGTTAAACGCCCAA
AATCAGTTGCTGGCTTGGCACCTGCGCCGGCGATTGCTGGACAGAAAACG
CTGAAGGGCTTCTTCAAGCCGAAGAGTTCTCCAGCCATTCAGAGCCGTGA
GCATCCAACGAACGACCATGGAGTATGTGCCATGCGACTACCTGCATCCC
CATCCAAGATTGTTTCCTCGGCAGAGTCAAAAGCACTAGACGAGGAGCAA
ACTGCGGCGGTCGTGACTACAGACTCCATAAAGGAGACCAATCCACCGGT
GTCGACGACATCAGACACCCCCACAGATGATGACACATTCGTCGACCCAA
TCGCGAGCAAGGAAGATTGGTCGAAGCTATTCTCCAAAAAGCGCGCCCCT
CTTTGCGAGGGCCACCAGGAGCCATGCATTAGTCTGACAACTAAAAAGCC
TGGCATCAACTGTGGCCGGTCCTTTTGGATTTGTCCTCGGCCTCTTGGAC
CCAGCGGCAACAAGGAGAAAGGTACGCAATGGCGCTGTCCGACATTTATT
TGGGCAAGTGATTGGAATTCTTCGGCATCGTAGGTTATTCGGGGGTCGTA
ATCTACACACGCAATGCCACATGTGCTCCCATTCGCGCCGAGGAAGGTCT
TTCGGGGATGCTATGCCCCCCGAACTCGTCGGTCTCTTTTCGGGAACTCC
CTGAGAATCAGCAGATCGGTGGTTATCCTACCATCGAGCAGTTGTCACAG
CTTGAAGTTGACGCAGCTACCCTAGACTCTGAGGGACGTTGTGTCATTCT
CGAGTTTCCCGCCTTTGTCCTGCTGGGCATCTATTCACCGGCCAATCGGG
ACGAGAGCCGCGACTCTTTTCGCCGCAGTTTCATTGACCTGATGGACGCG
CGGATCCGTAATTTAGTAGCTATGGGAAAGAGGGTGTTTGTGACAGGGGA
CTTAAATATCTCGCGGGGCGAGATCGATGCAGCTCATGCGGGGGAGGCTA
TCAGAAAAGGAACGTTGACAGAAGACGAGTTCGTGTCCACTCATGCACGG
CGTGTGCTCAATCAGTTGCTATCAGATGGAAAGGTAATTGGGGAGCGCGA
AGAAGGAAGGGAACAGCCCGTTCTACATGATATCTGTCGCTCTTTTCACC
CGGGCCGTAAGGGAATGTACACCTGCTGGGAGCAGCGCATCAATGCTCGT
CCTGGAAATTATGGCTCAAGAATTGACTATGTCTTGTGTAGCTTGGATAT
GCAAGAGTGGTTCTGCGATTCAAACATACAAGAAGGCCTCATGATGTTTG
ACATCCTCGAGGCCGATATCGTCGTCTTTCAGGAAACAAAAATCCAGCGC
AAAGACTTGCGCGATGACATGGTCCTAGTGCCTGGTTGGGATTGCTATTT
TAGTCTGCCTAGAGTCAAAAAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0004518nuclease activity
GO:0003824catalytic activity
GO:0004519endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005959ATCC10864_005959Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005959-T1ATCC10864_005959-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005959-T1.cdsATCC10864_005959-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005959-T1.exon3ATCC10864_005959-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005959-T1.exon2ATCC10864_005959-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005959-T1.exon1ATCC10864_005959-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR020848
InterProIPR036691
InterProIPR005135
PFAMPF03372
InterProIPR004808
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:264355..266249 -
Powered by Drupal