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ATCC10864_005979-T1, ATCC10864_005979-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005979-T1
Unique NameATCC10864_005979-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:320299..321586-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005979-T1 ID=ATCC10864_005979-T1|Name=ATCC10864_005979-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1288bp|location=Sequence derived from alignment at MCQH01000164:320299..321586- (Aspergillus niger ATCC 10864)
ATGCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGCTC
GAGCCACGCCTCCTACCGTGGTATGTTTTGACTGATCTTCCACCACCAAC
CCATCGCGTAGAATTGAAATTAATATCGTTTTTGTCGCGAATGACTGCTG
ATTCCATGAATATAGATATGATCAAGGATGCTATCCTGAATGTGAGTTAA
TCACGCTGTTCCCGGTGCGCGTTGGGATGAACGGGCGCTGGGCGGGATCT
CCGACCGTGACACGTCTACACGGTGCTTAATTGTCCCAACGCCCCATCGG
GCTCCTGCTTGTTTCACCTCCCAAATGGGTCGCTGACTTCTTTCGCAACA
GCTGAAAGAGCGCAATGGTAGCAGGTAAGTTGTTTGGTGTTTCTTCTCCC
CCGCCCGATGCAGGGTCCCGTTCGCTGGCGACGTGGCAACCTATCACCCT
GTCCAGGTCGCGATCTCGGCTGACTCGTCTTGTTTCTCCTCGACTGTAGC
CGCCAGTCGATCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGC
CTCCACCAACGCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTG
TTGAGAAGGGCGAGTTCCTTCAGCCCAAGGGTAAGTCAATCCATCGCGCG
CATTTTTTGCCTTCTCATGTCGCAACGGCATTCGATACTCCTGACATGGA
AGGATGTGTCTTGACTGCCGTCGTTCGCGTCTTTCATTTTTCGGTCTTGT
TTTTTTTTTGATGGGGCGTGTCAACTGACGCGTCGTCAACCAGGCCCCTC
CGGACCCGTGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTGCTA
AGGTAAGTCTTTATCAATGACATTTCGAACTGATAGAGAACTATTACTAA
CACTGTCCATAGAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGC
TGCCAAGAAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCA
AGACCACCAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCC
AAGGCTAACACGGCCAAGCCTCGCAAGTCCTCCACTACTGTAAGTTGTAG
ACTCCTGCCTTCTCACCCCCGGCGGACAGGGTATACTAATCTTGAAGCAG
GCTCCCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGG
CCGGGTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGA
CCACTAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAA
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Coding sequence (CDS) from alignment at MCQH01000164:320299..321586-

>ATCC10864_005979-T1 ID=ATCC10864_005979-T1|Name=ATCC10864_005979-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4368bp|location=Sequence derived from alignment at MCQH01000164:320299..321586- (Aspergillus niger ATCC 10864)
GCTCCCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGG
CCGGGTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGA
CCACTAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAAAGACTGCCACC
AAGGCTGCTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGA
GAAGGCCGAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCA
CTGCTAAGAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGC
AAGTCCTCCACTACTGCCCCTCCGGACCCGTGAAGCTTGCCAAGAAGGAA
GCTGCCCCCAAGCCTGCTGCTAAGCCGCCAGTCGATCAAGAAATATGTTC
AGGCGAACAATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAG
TTCAACAAGGCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCC
CAAGGCTGAAAGAGCGCAATGGTAGCAGATATGATCAAGGATGCTATCCT
GAATATGCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCG
GCTCGAGCCACGCCTCCTACCGTGGCTCCCGCCGTTGTCGACAAGCCCAA
GGTCCTCAAAACCACCAAGAGTGGCCGGGTGACTAAGACGACGGCTAAGC
CTGCAGAGAAGGCCACCAAGAAGACCACTAAGAAGGCTGCTGCAAAGGAG
ACTGCTGCTTAAAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGC
TGCCAAGAAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCA
AGACCACCAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCC
AAGGCTAACACGGCCAAGCCTCGCAAGTCCTCCACTACTGCCCCTCCGGA
CCCGTGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTGCTAAGCC
GCCAGTCGATCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGCC
TCCACCAACGCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTGT
TGAGAAGGGCGAGTTCCTTCAGCCCAAGGCTGAAAGAGCGCAATGGTAGC
AGATATGATCAAGGATGCTATCCTGAATATGCCTCCCAAGAAGACTTCCA
CCACCGGCACCACCAAGAAGTCCGGCTCGAGCCACGCCTCCTACCGTGGC
TCCCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGGCC
GGGTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGACC
ACTAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAAAGACTGCCACCAA
GGCTGCTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGAGA
AGGCCGAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCACT
GCTAAGAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGCAA
GTCCTCCACTACTGCCCCTCCGGACCCGTGAAGCTTGCCAAGAAGGAAGC
TGCCCCCAAGCCTGCTGCTAAGCCGCCAGTCGATCAAGAAATATGTTCAG
GCGAACAATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAGTT
CAACAAGGCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCCCA
AGGCTGAAAGAGCGCAATGGTAGCAGATATGATCAAGGATGCTATCCTGA
ATATGCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGC
TCGAGCCACGCCTCCTACCGTGGCTCCCGCCGTTGTCGACAAGCCCAAGG
TCCTCAAAACCACCAAGAGTGGCCGGGTGACTAAGACGACGGCTAAGCCT
GCAGAGAAGGCCACCAAGAAGACCACTAAGAAGGCTGCTGCAAAGGAGAC
TGCTGCTTAAAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGCTG
CCAAGAAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCAAG
ACCACCAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCCAA
GGCTAACACGGCCAAGCCTCGCAAGTCCTCCACTACTGCCCCTCCGGACC
CGTGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTGCTAAGCCGC
CAGTCGATCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGCCTC
CACCAACGCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTGTTG
AGAAGGGCGAGTTCCTTCAGCCCAAGGCTGAAAGAGCGCAATGGTAGCAG
ATATGATCAAGGATGCTATCCTGAATATGCCTCCCAAGAAGACTTCCACC
ACCGGCACCACCAAGAAGTCCGGCTCGAGCCACGCCTCCTACCGTGGCTC
CCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGGCCGG
GTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGACCAC
TAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAAAGACTGCCACCAAGG
CTGCTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGAGAAG
GCCGAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCACTGC
TAAGAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGCAAGT
CCTCCACTACTGCCCCTCCGGACCCGTGAAGCTTGCCAAGAAGGAAGCTG
CCCCCAAGCCTGCTGCTAAGCCGCCAGTCGATCAAGAAATATGTTCAGGC
GAACAATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAGTTCA
ACAAGGCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCCCAAG
GCTGAAAGAGCGCAATGGTAGCAGATATGATCAAGGATGCTATCCTGAAT
ATGCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGCTC
GAGCCACGCCTCCTACCGTGGCTCCCGCCGTTGTCGACAAGCCCAAGGTC
CTCAAAACCACCAAGAGTGGCCGGGTGACTAAGACGACGGCTAAGCCTGC
AGAGAAGGCCACCAAGAAGACCACTAAGAAGGCTGCTGCAAAGGAGACTG
CTGCTTAAAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGCTGCC
AAGAAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCAAGAC
CACCAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCCAAGG
CTAACACGGCCAAGCCTCGCAAGTCCTCCACTACTGCCCCTCCGGACCCG
TGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTGCTAAGCCGCCA
GTCGATCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGCCTCCA
CCAACGCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTGTTGAG
AAGGGCGAGTTCCTTCAGCCCAAGGCTGAAAGAGCGCAATGGTAGCAGAT
ATGATCAAGGATGCTATCCTGAATATGCCTCCCAAGAAGACTTCCACCAC
CGGCACCACCAAGAAGTCCGGCTCGAGCCACGCCTCCTACCGTGGCTCCC
GCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGGCCGGGT
GACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGACCACTA
AGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAAAGACTGCCACCAAGGCT
GCTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGAGAAGGC
CGAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCACTGCTA
AGAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGCAAGTCC
TCCACTACTGCCCCTCCGGACCCGTGAAGCTTGCCAAGAAGGAAGCTGCC
CCCAAGCCTGCTGCTAAGCCGCCAGTCGATCAAGAAATATGTTCAGGCGA
ACAATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAGTTCAAC
AAGGCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCCCAAGGC
TGAAAGAGCGCAATGGTAGCAGATATGATCAAGGATGCTATCCTGAATAT
GCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGCTCGA
GCCACGCCTCCTACCGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005979ATCC10864_005979Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005979-T1ATCC10864_005979-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005979-T1.cdsATCC10864_005979-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005979-T1.exon7ATCC10864_005979-T1.exon7Aspergillus niger ATCC 10864exon
ATCC10864_005979-T1.exon6ATCC10864_005979-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_005979-T1.exon5ATCC10864_005979-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_005979-T1.exon4ATCC10864_005979-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005979-T1.exon3ATCC10864_005979-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005979-T1.exon2ATCC10864_005979-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005979-T1.exon1ATCC10864_005979-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005819
InterProIPR036388
PFAMPF00538
InterProIPR036390
InterProIPR005818
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:320299..321586 -
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