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ATCC10864_005983-T1, ATCC10864_005983-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005983-T1
Unique NameATCC10864_005983-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:333334..334297+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005983-T1 ID=ATCC10864_005983-T1|Name=ATCC10864_005983-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=964bp|location=Sequence derived from alignment at MCQH01000164:333334..334297+ (Aspergillus niger ATCC 10864)
ATGGCTCTCAAGAGAATTAACAAGGAACTCACTGACCTCGGCCGGTAAGC
CTCGTCCTTCGTCATCTCGTTCCCCTCGTCTGCCTCTTTGCCGCCGCCTG
GTGCTACAACCCCCACCACGGCCGCGGGGCGTCCGTCTGACCCTCCGCCA
GACAGCGCCTCTGTCATGACGCATTGCCAGGGCATGTATAGAACTACGCT
AACGTGGGTTTCTTCATTTTACAGTGATCCCCCCTCTTCCTGCTCTGCTG
GTCCTTCCGGAGATGACCTGGTATGGTTTCACCCCTCCGAACCCCTCGTT
ACACACGGTCGCATTGCCGCTTTCGCCGACTGCGGCGGGGCAGCCCAACG
CAGATTTACCCTAGAACCCTCTATCAACGACATTCAATGCCTAGAAATGA
ATACTGACAATTAGTTTCTGCTGCACAGTTCCACTGGCAAGCAACTATCA
TGGGTCCTGTGAGTAATCCCGGATTTCTTTGGTGGTCGTCCGGATGCAGC
AAGTGTCTTTGTTCCCTTGTTCAGGAGGACCTTGCGGCACCCAACGGCGT
TTGATAGCAGGAATACTTTGCTAACGCGACTTCCAGGGTGACTCCCCCTA
CTCAGGAGGTGTTTTCTTCCTGAACATCCACTTCCCCACCGACTACCCAT
TCAAGCCCCCGAAGGTCAACTTCACCACCCGGATTTACCACCCCAACATC
AACGCCAACGGCAGCATCTGTCTTGACATTCTCAGAGACCAGTGGAGTCC
TGCTCTCACGATCTCCAAGGGTATGTTTCCTTCTGCCTGCAGAGCTATTG
ACGCATATACTAATCTGCTTCCAGTGCTCCTTTCGATCTGCTCTATGCTC
ACAGACCCCAACCCCGACGACCCGTTGGTGCCGGAAATCGCTCACGTGTA
CAAGACGGACCGTCCCCGGTACGAAGCGACCGCGCGGGAATGGACTCGCA
AATATGCCATCTGA
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Coding sequence (CDS) from alignment at MCQH01000164:333334..334297+

>ATCC10864_005983-T1 ID=ATCC10864_005983-T1|Name=ATCC10864_005983-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2220bp|location=Sequence derived from alignment at MCQH01000164:333334..334297+ (Aspergillus niger ATCC 10864)
ATGGCTCTCAAGAGAATTAACAAGGAACTCACTGACCTCGGCCGTGATCC
CCCCTCTTCCTGCTCTGCTGGTCCTTCCGGAGATGACCTGTTCCACTGGC
AAGCAACTATCATGGGTCCTGGTGACTCCCCCTACTCAGGAGGTGTTTTC
TTCCTGAACATCCACTTCCCCACCGACTACCCATTCAAGCCCCCGAAGGT
CAACTTCACCACCCGGATTTACCACCCCAACATCAACGCCAACGGCAGCA
TCTGTCTTGACATTCTCAGAGACCAGTGGAGTCCTGCTCTCACGATCTCC
AAGGTGCTCCTTTCGATCTGCTCTATGCTCACAGACCCCAACCCCGACGA
CCCGTTGGTGCCGGAAATCGCTCACGTGTACAAGACGGACCGTCCCCGGT
ACGAAGCGACCGCGCGGGAATGGACTCGCAAATATGCCATCTGAATGGCT
CTCAAGAGAATTAACAAGGAACTCACTGACCTCGGCCGTGATCCCCCCTC
TTCCTGCTCTGCTGGTCCTTCCGGAGATGACCTGTTCCACTGGCAAGCAA
CTATCATGGGTCCTGGTGACTCCCCCTACTCAGGAGGTGTTTTCTTCCTG
AACATCCACTTCCCCACCGACTACCCATTCAAGCCCCCGAAGGTCAACTT
CACCACCCGGATTTACCACCCCAACATCAACGCCAACGGCAGCATCTGTC
TTGACATTCTCAGAGACCAGTGGAGTCCTGCTCTCACGATCTCCAAGGTG
CTCCTTTCGATCTGCTCTATGCTCACAGACCCCAACCCCGACGACCCGTT
GGTGCCGGAAATCGCTCACGTGTACAAGACGGACCGTCCCCGGTACGAAG
CGACCGCGCGGGAATGGACTCGCAAATATGCCATCTGAATGGCTCTCAAG
AGAATTAACAAGGAACTCACTGACCTCGGCCGTGATCCCCCCTCTTCCTG
CTCTGCTGGTCCTTCCGGAGATGACCTGTTCCACTGGCAAGCAACTATCA
TGGGTCCTGGTGACTCCCCCTACTCAGGAGGTGTTTTCTTCCTGAACATC
CACTTCCCCACCGACTACCCATTCAAGCCCCCGAAGGTCAACTTCACCAC
CCGGATTTACCACCCCAACATCAACGCCAACGGCAGCATCTGTCTTGACA
TTCTCAGAGACCAGTGGAGTCCTGCTCTCACGATCTCCAAGGTGCTCCTT
TCGATCTGCTCTATGCTCACAGACCCCAACCCCGACGACCCGTTGGTGCC
GGAAATCGCTCACGTGTACAAGACGGACCGTCCCCGGTACGAAGCGACCG
CGCGGGAATGGACTCGCAAATATGCCATCTGAATGGCTCTCAAGAGAATT
AACAAGGAACTCACTGACCTCGGCCGTGATCCCCCCTCTTCCTGCTCTGC
TGGTCCTTCCGGAGATGACCTGTTCCACTGGCAAGCAACTATCATGGGTC
CTGGTGACTCCCCCTACTCAGGAGGTGTTTTCTTCCTGAACATCCACTTC
CCCACCGACTACCCATTCAAGCCCCCGAAGGTCAACTTCACCACCCGGAT
TTACCACCCCAACATCAACGCCAACGGCAGCATCTGTCTTGACATTCTCA
GAGACCAGTGGAGTCCTGCTCTCACGATCTCCAAGGTGCTCCTTTCGATC
TGCTCTATGCTCACAGACCCCAACCCCGACGACCCGTTGGTGCCGGAAAT
CGCTCACGTGTACAAGACGGACCGTCCCCGGTACGAAGCGACCGCGCGGG
AATGGACTCGCAAATATGCCATCTGAATGGCTCTCAAGAGAATTAACAAG
GAACTCACTGACCTCGGCCGTGATCCCCCCTCTTCCTGCTCTGCTGGTCC
TTCCGGAGATGACCTGTTCCACTGGCAAGCAACTATCATGGGTCCTGGTG
ACTCCCCCTACTCAGGAGGTGTTTTCTTCCTGAACATCCACTTCCCCACC
GACTACCCATTCAAGCCCCCGAAGGTCAACTTCACCACCCGGATTTACCA
CCCCAACATCAACGCCAACGGCAGCATCTGTCTTGACATTCTCAGAGACC
AGTGGAGTCCTGCTCTCACGATCTCCAAGGTGCTCCTTTCGATCTGCTCT
ATGCTCACAGACCCCAACCCCGACGACCCGTTGGTGCCGGAAATCGCTCA
CGTGTACAAGACGGACCGTCCCCGGTACGAAGCGACCGCGCGGGAATGGA
CTCGCAAATATGCCATCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC1_2ATCC10864_005983Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005983-T1ATCC10864_005983-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005983-T1.exon1ATCC10864_005983-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005983-T1.exon2ATCC10864_005983-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005983-T1.exon3ATCC10864_005983-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005983-T1.exon4ATCC10864_005983-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005983-T1.exon5ATCC10864_005983-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005983-T1.cdsATCC10864_005983-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000608
InterProIPR023313
PFAMPF00179
InterProIPR016135
Properties
Property NameValue
ProductUbiquitin-conjugating enzyme E2 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:333334..334297 +
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