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ATCC10864_006067-T1, ATCC10864_006067-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006067-T1
Unique NameATCC10864_006067-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:676231..677480-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006067-T1 ID=ATCC10864_006067-T1|Name=ATCC10864_006067-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1250bp|location=Sequence derived from alignment at MCQH01000164:676231..677480- (Aspergillus niger ATCC 10864)
ATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGA
CAAGTGGAAGGTACGCTATATCACCCAAATCTAAAACATCGAAACACTCG
AACCCGACCGAAACTAACCTGCAAATTTGTTGCGACCAGGTCGAACCCTT
CCAAGCCGAAGACAATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCG
CCACTCTTTTCCCCAAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCC
GTGGTGACAAGAGCGCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTT
GGTCGAGGGTAGCATGACAGTCAAGACGACCCGAAAGACGTTTGATCCTG
CTGCGATTCTCAAGGCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTG
CCGGTGCAACAGGTAAATAACCCTGAATTTATGATTTCTAGGTTACCGAT
AAAGTTACTAACACATTAAAACTAAATAGGCCCTCAAAATCCTCGAAGAC
GACGTCGCATGCGACATCATCAAGATCCGCAACCAAGTCCGCAACAAGGA
GCGCTTCGTTAAGCGTCGTCAACGCATTCTCGGTCCCGGTGGATCCACCC
TGAAAGCCTTGGAGCTGCTCACAAGCACCTACATCCTGGTCCAGGGTAAC
ACGGTCTCCGCCATGGGCCCCTACAAGGGTCTCAAGGAAGTCCGTCGCAT
CATCAACGACTGCATGGCCAACATCCACCCGATCTACCACATTAAGGAAC
TCATGATCAAGCGCGAATTGGCCAAGGACCCGACCCTGGCGAACGAATCC
TGGGACCGCTTCCTGCCTAACTTCAAGAAGCGCACGCTGTCCAAGCGTCG
CGTGCCGTTCAAGGTCACCGACAAGACGAAGAAGGTGTACACTCCTTTCC
CGCCGGCGCCGGAGAAGAGCAAGGTGGATCTCCAGATCGAGTCGGGCGAG
TACTTCCTGTCCAAGGAGGCGAAGGATCGGCAGCAGAAGGAGGAGGTCAT
GGAGAGACAGCGGTTGAAGCGCGAAGAGAAGATGAAGGAGCGCGAGAAGG
CGTTCGTGCCGCCCGAGGAGCTGGACGCAGAGGAGAAGAAGAAGGAAAAG
AAGGAGAAGAAGGAGAAGAAAGAGAAGAAGAAGCGGAAGCGCGATTCCGA
GGCCGCGGATGTAGATGGCGACGATGGTGCCGAGAAGAAGGAAAAGAAGA
AGAAGAAGAAGTCCAAGTCGAAAGAGGATGCGTCGGATGGAGAGGCGTGA
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Coding sequence (CDS) from alignment at MCQH01000164:676231..677480-

>ATCC10864_006067-T1 ID=ATCC10864_006067-T1|Name=ATCC10864_006067-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3312bp|location=Sequence derived from alignment at MCQH01000164:676231..677480- (Aspergillus niger ATCC 10864)
GCCCTCAAAATCCTCGAAGACGACGTCGCATGCGACATCATCAAGATCCG
CAACCAAGTCCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCAACGCATTC
TCGGTCCCGGTGGATCCACCCTGAAAGCCTTGGAGCTGCTCACAAGCACC
TACATCCTGGTCCAGGGTAACACGGTCTCCGCCATGGGCCCCTACAAGGG
TCTCAAGGAAGTCCGTCGCATCATCAACGACTGCATGGCCAACATCCACC
CGATCTACCACATTAAGGAACTCATGATCAAGCGCGAATTGGCCAAGGAC
CCGACCCTGGCGAACGAATCCTGGGACCGCTTCCTGCCTAACTTCAAGAA
GCGCACGCTGTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGACAAGACGA
AGAAGGTGTACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCAAGGTGGAT
CTCCAGATCGAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCGAAGGATCG
GCAGCAGAAGGAGGAGGTCATGGAGAGACAGCGGTTGAAGCGCGAAGAGA
AGATGAAGGAGCGCGAGAAGGCGTTCGTGCCGCCCGAGGAGCTGGACGCA
GAGGAGAAGAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAAGAGAAGAA
GAAGCGGAAGCGCGATTCCGAGGCCGCGGATGTAGATGGCGACGATGGTG
CCGAGAAGAAGGAAAAGAAGAAGAAGAAGAAGTCCAAGTCGAAAGAGGAT
GCGTCGGATGGAGAGGCGTGAGTCGAACCCTTCCAAGCCGAAGACAATGT
CGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCCAAGT
ACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGCGCTC
GAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCATGAC
AGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAGGCCC
GTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGATGCCT
TCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGACAAGTG
GAAGGCCCTCAAAATCCTCGAAGACGACGTCGCATGCGACATCATCAAGA
TCCGCAACCAAGTCCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCAACGC
ATTCTCGGTCCCGGTGGATCCACCCTGAAAGCCTTGGAGCTGCTCACAAG
CACCTACATCCTGGTCCAGGGTAACACGGTCTCCGCCATGGGCCCCTACA
AGGGTCTCAAGGAAGTCCGTCGCATCATCAACGACTGCATGGCCAACATC
CACCCGATCTACCACATTAAGGAACTCATGATCAAGCGCGAATTGGCCAA
GGACCCGACCCTGGCGAACGAATCCTGGGACCGCTTCCTGCCTAACTTCA
AGAAGCGCACGCTGTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGACAAG
ACGAAGAAGGTGTACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCAAGGT
GGATCTCCAGATCGAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCGAAGG
ATCGGCAGCAGAAGGAGGAGGTCATGGAGAGACAGCGGTTGAAGCGCGAA
GAGAAGATGAAGGAGCGCGAGAAGGCGTTCGTGCCGCCCGAGGAGCTGGA
CGCAGAGGAGAAGAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAAGAGA
AGAAGAAGCGGAAGCGCGATTCCGAGGCCGCGGATGTAGATGGCGACGAT
GGTGCCGAGAAGAAGGAAAAGAAGAAGAAGAAGAAGTCCAAGTCGAAAGA
GGATGCGTCGGATGGAGAGGCGTGAGTCGAACCCTTCCAAGCCGAAGACA
ATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTTCCCC
AAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAAGAGC
GCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGTAGCA
TGACAGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCTCAAG
GCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAACAGAT
GCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATTGACA
AGTGGAAGGCCCTCAAAATCCTCGAAGACGACGTCGCATGCGACATCATC
AAGATCCGCAACCAAGTCCGCAACAAGGAGCGCTTCGTTAAGCGTCGTCA
ACGCATTCTCGGTCCCGGTGGATCCACCCTGAAAGCCTTGGAGCTGCTCA
CAAGCACCTACATCCTGGTCCAGGGTAACACGGTCTCCGCCATGGGCCCC
TACAAGGGTCTCAAGGAAGTCCGTCGCATCATCAACGACTGCATGGCCAA
CATCCACCCGATCTACCACATTAAGGAACTCATGATCAAGCGCGAATTGG
CCAAGGACCCGACCCTGGCGAACGAATCCTGGGACCGCTTCCTGCCTAAC
TTCAAGAAGCGCACGCTGTCCAAGCGTCGCGTGCCGTTCAAGGTCACCGA
CAAGACGAAGAAGGTGTACACTCCTTTCCCGCCGGCGCCGGAGAAGAGCA
AGGTGGATCTCCAGATCGAGTCGGGCGAGTACTTCCTGTCCAAGGAGGCG
AAGGATCGGCAGCAGAAGGAGGAGGTCATGGAGAGACAGCGGTTGAAGCG
CGAAGAGAAGATGAAGGAGCGCGAGAAGGCGTTCGTGCCGCCCGAGGAGC
TGGACGCAGAGGAGAAGAAGAAGGAAAAGAAGGAGAAGAAGGAGAAGAAA
GAGAAGAAGAAGCGGAAGCGCGATTCCGAGGCCGCGGATGTAGATGGCGA
CGATGGTGCCGAGAAGAAGGAAAAGAAGAAGAAGAAGAAGTCCAAGTCGA
AAGAGGATGCGTCGGATGGAGAGGCGTGAGTCGAACCCTTCCAAGCCGAA
GACAATGTCGCCGGTAGTTTCGCTGAAGAATCTTCCTTCGCCACTCTTTT
CCCCAAGTACCGTGAAGTCTACCTGAAGGAAGCATGGCCCGTGGTGACAA
GAGCGCTCGAGAAATTCGGTATTGCCTGCACGCTGGATTTGGTCGAGGGT
AGCATGACAGTCAAGACGACCCGAAAGACGTTTGATCCTGCTGCGATTCT
CAAGGCCCGTGACTTGATCAAGCTGTTGTCGAGAAGTGTGCCGGTGCAAC
AGATGCCTTCCACCTACAAGAGGGACAAGCCGTGGGACACGGATGACATT
GACAAGTGGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KRR1ATCC10864_006067Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006067-T1ATCC10864_006067-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006067-T1.cdsATCC10864_006067-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006067-T1.exon3ATCC10864_006067-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006067-T1.exon2ATCC10864_006067-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006067-T1.exon1ATCC10864_006067-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF17903
InterProIPR024166
InterProIPR004087
InterProIPR041174
InterProIPR036612
Properties
Property NameValue
NoteBUSCO:EOG09263CG4
Productribosomal RNA assembly protein krr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:676231..677480 -
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