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ATCC10864_006071-T1, ATCC10864_006071-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006071-T1
Unique NameATCC10864_006071-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:688872..689925+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006071-T1 ID=ATCC10864_006071-T1|Name=ATCC10864_006071-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1054bp|location=Sequence derived from alignment at MCQH01000164:688872..689925+ (Aspergillus niger ATCC 10864)
ATGTTCATTGCCCGCTCGGAATACGGTAAGCTCCGTCAGACCTCCCCCTC
TGATGCGGTCATCTAACAGCTTTCCTTGACAGACCGTGGAATCAAGTACG
ACTCTGATGCCCCTTTGCTGCATAGCAATGCAAGCATATACAGTGTCTAA
CCATGCGATAACAGCACCTTCTCCCCGGAGGGGCGTTTGTTCCAGGTCGA
ATACTCTCTCGAAGCTATCAAGCTGGGTTCAACAGCGATCGGTGTACGTG
CATCCGTTCCTGCCCGACTACGTTTCATACCTCACCTTCTCGAAACCATC
AACTACACTAGTGGCCTCCGATAATTCTAACATCATTGTAGGTCGCAACC
TCCGAAGGTGTAATCCTAGGTGTCGAGAAGCGTGTCACCTCCAGCCTCCT
CGAGGCCTCCTCCGTCGAGAAGATCGTTGAGATCGACCAACACATTGGCT
GCGCCATGTCCGGTCTGCAGGCAGATGCCCGGTCCCTGGTCGAGCATGCC
CGTGTCGAATGCCAGAACCATGCCTTCCACTACGCCGAGCCGTTGAGAGT
CGAGAGCTGCACCCAGGCCATCTGTGACCTGGCCCTGCGATTCGGAGAGA
CGGGGGATGACGAGGAGAGCGTCATGAGTCGGCCTTTTGGTGTCGCCTTG
TTGCTCGCTGGTATTGATGAGGATGGTCCGCAACTGTATGTTGGGTGTTC
TTCCCGCTTACTCACCTGCGGGGAAGTGAGACCGCTACTTTGAACGTGTG
TACTGATTGATTCTATTTGTTTAGATACCACGCGGAGCCCTCCGGAACGT
TCTACCGATATGATGCGAAGGCGATCGGGTCCGGAAGCGAGGGTGCGCAG
GCGGAGTTGCAGAATGAATACCATCGTTCCTTGACGCTGGGTGAGGCGGA
GACTCTGGTTCTCAAGACGTTGAAGCAGGTCATGGAGGAGAAGCTGGACG
CGAAGAACGTCCAGCTCGCTAGTGTGACTAAGGAGAAGGGCTTCCGTATT
TACGATGATGAGGAGATGGGCAGGGCTGTTGCGCAGCTGGGCAGCAACCA
ATGA
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Coding sequence (CDS) from alignment at MCQH01000164:688872..689925+

>ATCC10864_006071-T1 ID=ATCC10864_006071-T1|Name=ATCC10864_006071-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3705bp|location=Sequence derived from alignment at MCQH01000164:688872..689925+ (Aspergillus niger ATCC 10864)
ATGTTCATTGCCCGCTCGGAATACGACCGTGGAATCAACACCTTCTCCCC
GGAGGGGCGTTTGTTCCAGGTCGAATACTCTCTCGAAGCTATCAAGCTGG
GTTCAACAGCGATCGGTGTCGCAACCTCCGAAGGTGTAATCCTAGGTGTC
GAGAAGCGTGTCACCTCCAGCCTCCTCGAGGCCTCCTCCGTCGAGAAGAT
CGTTGAGATCGACCAACACATTGGCTGCGCCATGTCCGGTCTGCAGGCAG
ATGCCCGGTCCCTGGTCGAGCATGCCCGTGTCGAATGCCAGAACCATGCC
TTCCACTACGCCGAGCCGTTGAGAGTCGAGAGCTGCACCCAGGCCATCTG
TGACCTGGCCCTGCGATTCGGAGAGACGGGGGATGACGAGGAGAGCGTCA
TGAGTCGGCCTTTTGGTGTCGCCTTGTTGCTCGCTGGTATTGATGAGGAT
GGTCCGCAACTATACCACGCGGAGCCCTCCGGAACGTTCTACCGATATGA
TGCGAAGGCGATCGGGTCCGGAAGCGAGGGTGCGCAGGCGGAGTTGCAGA
ATGAATACCATCGTTCCTTGACGCTGGGTGAGGCGGAGACTCTGGTTCTC
AAGACGTTGAAGCAGGTCATGGAGGAGAAGCTGGACGCGAAGAACGTCCA
GCTCGCTAGTGTGACTAAGGAGAAGGGCTTCCGTATTTACGATGATGAGG
AGATGGGCAGGGCTGTTGCGCAGCTGGGCAGCAACCAATGAATGTTCATT
GCCCGCTCGGAATACGACCGTGGAATCAACACCTTCTCCCCGGAGGGGCG
TTTGTTCCAGGTCGAATACTCTCTCGAAGCTATCAAGCTGGGTTCAACAG
CGATCGGTGTCGCAACCTCCGAAGGTGTAATCCTAGGTGTCGAGAAGCGT
GTCACCTCCAGCCTCCTCGAGGCCTCCTCCGTCGAGAAGATCGTTGAGAT
CGACCAACACATTGGCTGCGCCATGTCCGGTCTGCAGGCAGATGCCCGGT
CCCTGGTCGAGCATGCCCGTGTCGAATGCCAGAACCATGCCTTCCACTAC
GCCGAGCCGTTGAGAGTCGAGAGCTGCACCCAGGCCATCTGTGACCTGGC
CCTGCGATTCGGAGAGACGGGGGATGACGAGGAGAGCGTCATGAGTCGGC
CTTTTGGTGTCGCCTTGTTGCTCGCTGGTATTGATGAGGATGGTCCGCAA
CTATACCACGCGGAGCCCTCCGGAACGTTCTACCGATATGATGCGAAGGC
GATCGGGTCCGGAAGCGAGGGTGCGCAGGCGGAGTTGCAGAATGAATACC
ATCGTTCCTTGACGCTGGGTGAGGCGGAGACTCTGGTTCTCAAGACGTTG
AAGCAGGTCATGGAGGAGAAGCTGGACGCGAAGAACGTCCAGCTCGCTAG
TGTGACTAAGGAGAAGGGCTTCCGTATTTACGATGATGAGGAGATGGGCA
GGGCTGTTGCGCAGCTGGGCAGCAACCAATGAATGTTCATTGCCCGCTCG
GAATACGACCGTGGAATCAACACCTTCTCCCCGGAGGGGCGTTTGTTCCA
GGTCGAATACTCTCTCGAAGCTATCAAGCTGGGTTCAACAGCGATCGGTG
TCGCAACCTCCGAAGGTGTAATCCTAGGTGTCGAGAAGCGTGTCACCTCC
AGCCTCCTCGAGGCCTCCTCCGTCGAGAAGATCGTTGAGATCGACCAACA
CATTGGCTGCGCCATGTCCGGTCTGCAGGCAGATGCCCGGTCCCTGGTCG
AGCATGCCCGTGTCGAATGCCAGAACCATGCCTTCCACTACGCCGAGCCG
TTGAGAGTCGAGAGCTGCACCCAGGCCATCTGTGACCTGGCCCTGCGATT
CGGAGAGACGGGGGATGACGAGGAGAGCGTCATGAGTCGGCCTTTTGGTG
TCGCCTTGTTGCTCGCTGGTATTGATGAGGATGGTCCGCAACTATACCAC
GCGGAGCCCTCCGGAACGTTCTACCGATATGATGCGAAGGCGATCGGGTC
CGGAAGCGAGGGTGCGCAGGCGGAGTTGCAGAATGAATACCATCGTTCCT
TGACGCTGGGTGAGGCGGAGACTCTGGTTCTCAAGACGTTGAAGCAGGTC
ATGGAGGAGAAGCTGGACGCGAAGAACGTCCAGCTCGCTAGTGTGACTAA
GGAGAAGGGCTTCCGTATTTACGATGATGAGGAGATGGGCAGGGCTGTTG
CGCAGCTGGGCAGCAACCAATGAATGTTCATTGCCCGCTCGGAATACGAC
CGTGGAATCAACACCTTCTCCCCGGAGGGGCGTTTGTTCCAGGTCGAATA
CTCTCTCGAAGCTATCAAGCTGGGTTCAACAGCGATCGGTGTCGCAACCT
CCGAAGGTGTAATCCTAGGTGTCGAGAAGCGTGTCACCTCCAGCCTCCTC
GAGGCCTCCTCCGTCGAGAAGATCGTTGAGATCGACCAACACATTGGCTG
CGCCATGTCCGGTCTGCAGGCAGATGCCCGGTCCCTGGTCGAGCATGCCC
GTGTCGAATGCCAGAACCATGCCTTCCACTACGCCGAGCCGTTGAGAGTC
GAGAGCTGCACCCAGGCCATCTGTGACCTGGCCCTGCGATTCGGAGAGAC
GGGGGATGACGAGGAGAGCGTCATGAGTCGGCCTTTTGGTGTCGCCTTGT
TGCTCGCTGGTATTGATGAGGATGGTCCGCAACTATACCACGCGGAGCCC
TCCGGAACGTTCTACCGATATGATGCGAAGGCGATCGGGTCCGGAAGCGA
GGGTGCGCAGGCGGAGTTGCAGAATGAATACCATCGTTCCTTGACGCTGG
GTGAGGCGGAGACTCTGGTTCTCAAGACGTTGAAGCAGGTCATGGAGGAG
AAGCTGGACGCGAAGAACGTCCAGCTCGCTAGTGTGACTAAGGAGAAGGG
CTTCCGTATTTACGATGATGAGGAGATGGGCAGGGCTGTTGCGCAGCTGG
GCAGCAACCAATGAATGTTCATTGCCCGCTCGGAATACGACCGTGGAATC
AACACCTTCTCCCCGGAGGGGCGTTTGTTCCAGGTCGAATACTCTCTCGA
AGCTATCAAGCTGGGTTCAACAGCGATCGGTGTCGCAACCTCCGAAGGTG
TAATCCTAGGTGTCGAGAAGCGTGTCACCTCCAGCCTCCTCGAGGCCTCC
TCCGTCGAGAAGATCGTTGAGATCGACCAACACATTGGCTGCGCCATGTC
CGGTCTGCAGGCAGATGCCCGGTCCCTGGTCGAGCATGCCCGTGTCGAAT
GCCAGAACCATGCCTTCCACTACGCCGAGCCGTTGAGAGTCGAGAGCTGC
ACCCAGGCCATCTGTGACCTGGCCCTGCGATTCGGAGAGACGGGGGATGA
CGAGGAGAGCGTCATGAGTCGGCCTTTTGGTGTCGCCTTGTTGCTCGCTG
GTATTGATGAGGATGGTCCGCAACTATACCACGCGGAGCCCTCCGGAACG
TTCTACCGATATGATGCGAAGGCGATCGGGTCCGGAAGCGAGGGTGCGCA
GGCGGAGTTGCAGAATGAATACCATCGTTCCTTGACGCTGGGTGAGGCGG
AGACTCTGGTTCTCAAGACGTTGAAGCAGGTCATGGAGGAGAAGCTGGAC
GCGAAGAACGTCCAGCTCGCTAGTGTGACTAAGGAGAAGGGCTTCCGTAT
TTACGATGATGAGGAGATGGGCAGGGCTGTTGCGCAGCTGGGCAGCAACC
AATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PUP2ATCC10864_006071Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006071-T1ATCC10864_006071-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006071-T1.exon1ATCC10864_006071-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006071-T1.exon2ATCC10864_006071-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006071-T1.exon3ATCC10864_006071-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006071-T1.exon4ATCC10864_006071-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006071-T1.exon5ATCC10864_006071-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006071-T1.cdsATCC10864_006071-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000426
InterProIPR001353
PFAMPF10584
InterProIPR023332
InterProIPR033812
PFAMPF00227
InterProIPR029055
Properties
Property NameValue
NoteMEROPS:MER0047611
Productproteasome component pup2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:688872..689925 +
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