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ATCC10864_006108-T1, ATCC10864_006108-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006108-T1
Unique NameATCC10864_006108-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:796959..797750+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006108-T1 ID=ATCC10864_006108-T1|Name=ATCC10864_006108-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=792bp|location=Sequence derived from alignment at MCQH01000164:796959..797750+ (Aspergillus niger ATCC 10864)
ATGCCCGCCTCTGACATAAATATGGAACGCCTTCCAATGAATGAGAACCC
CGCCGGTGCCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAACA
ACACGCTCGGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGATG
TTCACCACCGCTGCTCAGCTGTTGGATTTGACAGATAGTGCGTTATACCT
GTTCACTTGGCCCCCATGGGCTTATCTCACAAATGGAGACGGGCGCAACC
TGACAGTGGTTTCCAGAAAAGCTAGTTCTAGTCCTTCGAGACGGGCGGAA
GTTGATCGGAGTTTTGAGAAGCTGGGATCAGTTCGGTATGCGCCGCATGA
TAGATGAATACCGGTTGATGATATATATCTGACTGTGCGACTCTTGCTAT
GTGACTGCTGCAGCAAACCTTGTCCTTCAGGATACCATTGAACGTCTATA
TGCCGGCAACCTCTACGCCGATATCCCGCGAGGTATATTTCTCGTCCGGG
GTGAGAATGTCTTGCTTCTGGGTGAAATCGTACGCAAACCTTCCATGCAT
CTTCTTCGCTATTCATGTTTAGGGCGGGGAGTTGGCTAATTGGTGTGTCT
TGCTTCTCCGGGTTACAGGATCTCGACAAAGAAGATGACATTCCCCCTCA
TATCCAGCGCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAAGAAGGAAG
ACGGGGCTCGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGCTACAGACG
CTGGGCTTTGAGCCGGAGCATAGCGGAGAGATACTGTTTTAG
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Coding sequence (CDS) from alignment at MCQH01000164:796959..797750+

>ATCC10864_006108-T1 ID=ATCC10864_006108-T1|Name=ATCC10864_006108-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2184bp|location=Sequence derived from alignment at MCQH01000164:796959..797750+ (Aspergillus niger ATCC 10864)
ATGCCCGCCTCTGACATAAATATGGAACGCCTTCCAATGAATGAGAACCC
CGCCGGTGCCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAACA
ACACGCTCGGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGATG
TTCACCACCGCTGCTCAGCTGTTGGATTTGACAGATAAAAAGCTAGTTCT
AGTCCTTCGAGACGGGCGGAAGTTGATCGGAGTTTTGAGAAGCTGGGATC
AGTTCGCAAACCTTGTCCTTCAGGATACCATTGAACGTCTATATGCCGGC
AACCTCTACGCCGATATCCCGCGAGGTATATTTCTCGTCCGGGGTGAGAA
TGTCTTGCTTCTGGGTGAAATCGATCTCGACAAAGAAGATGACATTCCCC
CTCATATCCAGCGCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAAGAAG
GAAGACGGGGCTCGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGCTACA
GACGCTGGGCTTTGAGCCGGAGCATAGCGGAGAGATACTGTTTTAGATGC
CCGCCTCTGACATAAATATGGAACGCCTTCCAATGAATGAGAACCCCGCC
GGTGCCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAACAACAC
GCTCGGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGATGTTCA
CCACCGCTGCTCAGCTGTTGGATTTGACAGATAAAAAGCTAGTTCTAGTC
CTTCGAGACGGGCGGAAGTTGATCGGAGTTTTGAGAAGCTGGGATCAGTT
CGCAAACCTTGTCCTTCAGGATACCATTGAACGTCTATATGCCGGCAACC
TCTACGCCGATATCCCGCGAGGTATATTTCTCGTCCGGGGTGAGAATGTC
TTGCTTCTGGGTGAAATCGATCTCGACAAAGAAGATGACATTCCCCCTCA
TATCCAGCGCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAAGAAGGAAG
ACGGGGCTCGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGCTACAGACG
CTGGGCTTTGAGCCGGAGCATAGCGGAGAGATACTGTTTTAGATGCCCGC
CTCTGACATAAATATGGAACGCCTTCCAATGAATGAGAACCCCGCCGGTG
CCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAACAACACGCTC
GGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGATGTTCACCAC
CGCTGCTCAGCTGTTGGATTTGACAGATAAAAAGCTAGTTCTAGTCCTTC
GAGACGGGCGGAAGTTGATCGGAGTTTTGAGAAGCTGGGATCAGTTCGCA
AACCTTGTCCTTCAGGATACCATTGAACGTCTATATGCCGGCAACCTCTA
CGCCGATATCCCGCGAGGTATATTTCTCGTCCGGGGTGAGAATGTCTTGC
TTCTGGGTGAAATCGATCTCGACAAAGAAGATGACATTCCCCCTCATATC
CAGCGCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAAGAAGGAAGACGG
GGCTCGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGCTACAGACGCTGG
GCTTTGAGCCGGAGCATAGCGGAGAGATACTGTTTTAGATGCCCGCCTCT
GACATAAATATGGAACGCCTTCCAATGAATGAGAACCCCGCCGGTGCCCA
CCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAGAACAACACGCTCGGAC
CCATGTCGCAAGGTCCCCCGCAATTACCGCCGCAGATGTTCACCACCGCT
GCTCAGCTGTTGGATTTGACAGATAAAAAGCTAGTTCTAGTCCTTCGAGA
CGGGCGGAAGTTGATCGGAGTTTTGAGAAGCTGGGATCAGTTCGCAAACC
TTGTCCTTCAGGATACCATTGAACGTCTATATGCCGGCAACCTCTACGCC
GATATCCCGCGAGGTATATTTCTCGTCCGGGGTGAGAATGTCTTGCTTCT
GGGTGAAATCGATCTCGACAAAGAAGATGACATTCCCCCTCATATCCAGC
GCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAAGAAGGAAGACGGGGCT
CGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGCTACAGACGCTGGGCTT
TGAGCCGGAGCATAGCGGAGAGATACTGTTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000956nuclear-transcribed mRNA catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006108ATCC10864_006108Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006108-T1.exon1ATCC10864_006108-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006108-T1.exon2ATCC10864_006108-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006108-T1.exon3ATCC10864_006108-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006108-T1.exon4ATCC10864_006108-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006108-T1.cdsATCC10864_006108-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006108-T1ATCC10864_006108-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR010920
InterProIPR034104
InterProIPR001163
InterProIPR044642
PFAMPF01423
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:796959..797750 +
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