You are here

Home

ATCC10864_006139-T1, ATCC10864_006139-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006139-T1
Unique NameATCC10864_006139-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:897913..899321+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006139-T1 ID=ATCC10864_006139-T1|Name=ATCC10864_006139-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1409bp|location=Sequence derived from alignment at MCQH01000164:897913..899321+ (Aspergillus niger ATCC 10864)
ATGGGCGAAGCTGACAGTAGCAGTGTCCGGTTTCCAGGGGCTATCAATAG
CAAATTCACTACCGATATGACCTTCATCAACCCTACCGAAATGTCCAATA
TCCCTACGTACCGAGTCATGGACTCCGACGGAGTACTGGTCGACAAGTCG
CGCAAGTCCATCGACGTGCCAAAGGAAGAGATTCTGGCATGGTACAAGAA
CATGTTGACAGGTTGGGTTACATAGATATCATGCTACCGCTCTGGATCTG
ACAGCAGCCAGTCAGTGTCATGGACGTCATCATGTTTGAAGCGCAACGGC
AGGGTCGACTGAGCTTCTATATGGTATGCCTATTACTGTTATAAAAGTCT
CCATAATTACTGAAGCTGACTTTGTTAGGTATCCGCCGGCGAAGAAGGGA
TCAGTGTCGGATCCGCCGCAGCCTTAACCCCAGACGACGTAGTATTCGCC
CAGTACCGCGAAGCAGGCGTCTTCCAGCAACGAGGCTTCACCCTGAAAAA
CTTCATGAGCCAACTGTTTGCCAATAGATTCGACAACAGCAAGGGCCGTA
ACATGCCAGTACATTATGGGTGCAACTATCCCCGAACAGTTCGTCTCCTC
CACACATAACCGCGCAGCCATTACCTAACTATACCTAGCACACAATCTCC
TCCCCGCTTGCAACCCAAATACCCCAAGCATCCGGTGCTGCCTACGCTCT
CAAGTTACAATCACTCCAGAACCCCGATACCCCGGCGCGAATCGTTGCCT
GCTATTTCGGCGAAGGAGCCGCCAGCGAAGGTGACTTCCATGCGGGCTTG
AATATAGCCGCGACGCGGTCCTGTCCCGTGGTGTTCATCTGCCGCAACAA
TGGGTATGCGATCTCCACCCCTACACTAGAACAATACCGGGGCGACGGTA
TCGCTAGCCGCGGTGTTGGCTACGGCATTGACACCATCCGGGTGGACGGC
AACGACATCTTCGCCGTCTACGAGGCAATGCGTGAAGCTCGTCGCCTCGC
GCTCCAAGACGGAGGTAAACCCGTCCTCATCGAAGCAATGAGTTACCGTG
TATCGCACCACAGCACCAGCGATGATAGCTTTGCGTACCGGGCAAGGGTT
GAAGTCGAGGACTGGAAACGGCGTGATAACCCAATTATCCGGTTGCGGAA
GTGGTTGGAAAATGAAGGTCACTGGAGTGAAGATCTAGAGCGGGAAACGC
GCGATAAGATTCGAAAGGAGGTGCTCAGGGAGTTTGGGGAGGCAGAGCGG
GAGAAGAAGCCCCCATTGAGGGAAGCGTTTGAGGGGGTTTATGACGAGTT
GACAGAGGAGGCGGAGGCTCAGATGAAGGAGCTGAAGAGGATATTGGAGA
CATATCCTGAGGAATATGATTTGCATCAGTTCCAGGATGGCGTGAATGGG
TTACGATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000164:897913..899321+

>ATCC10864_006139-T1 ID=ATCC10864_006139-T1|Name=ATCC10864_006139-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5016bp|location=Sequence derived from alignment at MCQH01000164:897913..899321+ (Aspergillus niger ATCC 10864)
ATGGGCGAAGCTGACAGTAGCAGTGTCCGGTTTCCAGGGGCTATCAATAG
CAAATTCACTACCGATATGACCTTCATCAACCCTACCGAAATGTCCAATA
TCCCTACGTACCGAGTCATGGACTCCGACGGAGTACTGGTCGACAAGTCG
CGCAAGTCCATCGACGTGCCAAAGGAAGAGATTCTGGCATGGTACAAGAA
CATGTTGACAGTCAGTGTCATGGACGTCATCATGTTTGAAGCGCAACGGC
AGGGTCGACTGAGCTTCTATATGGTATCCGCCGGCGAAGAAGGGATCAGT
GTCGGATCCGCCGCAGCCTTAACCCCAGACGACGTAGTATTCGCCCAGTA
CCGCGAAGCAGGCGTCTTCCAGCAACGAGGCTTCACCCTGAAAAACTTCA
TGAGCCAACTGTTTGCCAATAGATTCGACAACAGCAAGGGCCGTAACATG
CCAGTACATTATGGGTGCAACTATCCCCGAACACACACAATCTCCTCCCC
GCTTGCAACCCAAATACCCCAAGCATCCGGTGCTGCCTACGCTCTCAAGT
TACAATCACTCCAGAACCCCGATACCCCGGCGCGAATCGTTGCCTGCTAT
TTCGGCGAAGGAGCCGCCAGCGAAGGTGACTTCCATGCGGGCTTGAATAT
AGCCGCGACGCGGTCCTGTCCCGTGGTGTTCATCTGCCGCAACAATGGGT
ATGCGATCTCCACCCCTACACTAGAACAATACCGGGGCGACGGTATCGCT
AGCCGCGGTGTTGGCTACGGCATTGACACCATCCGGGTGGACGGCAACGA
CATCTTCGCCGTCTACGAGGCAATGCGTGAAGCTCGTCGCCTCGCGCTCC
AAGACGGAGGTAAACCCGTCCTCATCGAAGCAATGAGTTACCGTGTATCG
CACCACAGCACCAGCGATGATAGCTTTGCGTACCGGGCAAGGGTTGAAGT
CGAGGACTGGAAACGGCGTGATAACCCAATTATCCGGTTGCGGAAGTGGT
TGGAAAATGAAGGTCACTGGAGTGAAGATCTAGAGCGGGAAACGCGCGAT
AAGATTCGAAAGGAGGTGCTCAGGGAGTTTGGGGAGGCAGAGCGGGAGAA
GAAGCCCCCATTGAGGGAAGCGTTTGAGGGGGTTTATGACGAGTTGACAG
AGGAGGCGGAGGCTCAGATGAAGGAGCTGAAGAGGATATTGGAGACATAT
CCTGAGGAATATGATTTGCATCAGTTCCAGGATGGCGTGAATGGGTTACG
ATAGATGGGCGAAGCTGACAGTAGCAGTGTCCGGTTTCCAGGGGCTATCA
ATAGCAAATTCACTACCGATATGACCTTCATCAACCCTACCGAAATGTCC
AATATCCCTACGTACCGAGTCATGGACTCCGACGGAGTACTGGTCGACAA
GTCGCGCAAGTCCATCGACGTGCCAAAGGAAGAGATTCTGGCATGGTACA
AGAACATGTTGACAGTCAGTGTCATGGACGTCATCATGTTTGAAGCGCAA
CGGCAGGGTCGACTGAGCTTCTATATGGTATCCGCCGGCGAAGAAGGGAT
CAGTGTCGGATCCGCCGCAGCCTTAACCCCAGACGACGTAGTATTCGCCC
AGTACCGCGAAGCAGGCGTCTTCCAGCAACGAGGCTTCACCCTGAAAAAC
TTCATGAGCCAACTGTTTGCCAATAGATTCGACAACAGCAAGGGCCGTAA
CATGCCAGTACATTATGGGTGCAACTATCCCCGAACACACACAATCTCCT
CCCCGCTTGCAACCCAAATACCCCAAGCATCCGGTGCTGCCTACGCTCTC
AAGTTACAATCACTCCAGAACCCCGATACCCCGGCGCGAATCGTTGCCTG
CTATTTCGGCGAAGGAGCCGCCAGCGAAGGTGACTTCCATGCGGGCTTGA
ATATAGCCGCGACGCGGTCCTGTCCCGTGGTGTTCATCTGCCGCAACAAT
GGGTATGCGATCTCCACCCCTACACTAGAACAATACCGGGGCGACGGTAT
CGCTAGCCGCGGTGTTGGCTACGGCATTGACACCATCCGGGTGGACGGCA
ACGACATCTTCGCCGTCTACGAGGCAATGCGTGAAGCTCGTCGCCTCGCG
CTCCAAGACGGAGGTAAACCCGTCCTCATCGAAGCAATGAGTTACCGTGT
ATCGCACCACAGCACCAGCGATGATAGCTTTGCGTACCGGGCAAGGGTTG
AAGTCGAGGACTGGAAACGGCGTGATAACCCAATTATCCGGTTGCGGAAG
TGGTTGGAAAATGAAGGTCACTGGAGTGAAGATCTAGAGCGGGAAACGCG
CGATAAGATTCGAAAGGAGGTGCTCAGGGAGTTTGGGGAGGCAGAGCGGG
AGAAGAAGCCCCCATTGAGGGAAGCGTTTGAGGGGGTTTATGACGAGTTG
ACAGAGGAGGCGGAGGCTCAGATGAAGGAGCTGAAGAGGATATTGGAGAC
ATATCCTGAGGAATATGATTTGCATCAGTTCCAGGATGGCGTGAATGGGT
TACGATAGATGGGCGAAGCTGACAGTAGCAGTGTCCGGTTTCCAGGGGCT
ATCAATAGCAAATTCACTACCGATATGACCTTCATCAACCCTACCGAAAT
GTCCAATATCCCTACGTACCGAGTCATGGACTCCGACGGAGTACTGGTCG
ACAAGTCGCGCAAGTCCATCGACGTGCCAAAGGAAGAGATTCTGGCATGG
TACAAGAACATGTTGACAGTCAGTGTCATGGACGTCATCATGTTTGAAGC
GCAACGGCAGGGTCGACTGAGCTTCTATATGGTATCCGCCGGCGAAGAAG
GGATCAGTGTCGGATCCGCCGCAGCCTTAACCCCAGACGACGTAGTATTC
GCCCAGTACCGCGAAGCAGGCGTCTTCCAGCAACGAGGCTTCACCCTGAA
AAACTTCATGAGCCAACTGTTTGCCAATAGATTCGACAACAGCAAGGGCC
GTAACATGCCAGTACATTATGGGTGCAACTATCCCCGAACACACACAATC
TCCTCCCCGCTTGCAACCCAAATACCCCAAGCATCCGGTGCTGCCTACGC
TCTCAAGTTACAATCACTCCAGAACCCCGATACCCCGGCGCGAATCGTTG
CCTGCTATTTCGGCGAAGGAGCCGCCAGCGAAGGTGACTTCCATGCGGGC
TTGAATATAGCCGCGACGCGGTCCTGTCCCGTGGTGTTCATCTGCCGCAA
CAATGGGTATGCGATCTCCACCCCTACACTAGAACAATACCGGGGCGACG
GTATCGCTAGCCGCGGTGTTGGCTACGGCATTGACACCATCCGGGTGGAC
GGCAACGACATCTTCGCCGTCTACGAGGCAATGCGTGAAGCTCGTCGCCT
CGCGCTCCAAGACGGAGGTAAACCCGTCCTCATCGAAGCAATGAGTTACC
GTGTATCGCACCACAGCACCAGCGATGATAGCTTTGCGTACCGGGCAAGG
GTTGAAGTCGAGGACTGGAAACGGCGTGATAACCCAATTATCCGGTTGCG
GAAGTGGTTGGAAAATGAAGGTCACTGGAGTGAAGATCTAGAGCGGGAAA
CGCGCGATAAGATTCGAAAGGAGGTGCTCAGGGAGTTTGGGGAGGCAGAG
CGGGAGAAGAAGCCCCCATTGAGGGAAGCGTTTGAGGGGGTTTATGACGA
GTTGACAGAGGAGGCGGAGGCTCAGATGAAGGAGCTGAAGAGGATATTGG
AGACATATCCTGAGGAATATGATTTGCATCAGTTCCAGGATGGCGTGAAT
GGGTTACGATAGATGGGCGAAGCTGACAGTAGCAGTGTCCGGTTTCCAGG
GGCTATCAATAGCAAATTCACTACCGATATGACCTTCATCAACCCTACCG
AAATGTCCAATATCCCTACGTACCGAGTCATGGACTCCGACGGAGTACTG
GTCGACAAGTCGCGCAAGTCCATCGACGTGCCAAAGGAAGAGATTCTGGC
ATGGTACAAGAACATGTTGACAGTCAGTGTCATGGACGTCATCATGTTTG
AAGCGCAACGGCAGGGTCGACTGAGCTTCTATATGGTATCCGCCGGCGAA
GAAGGGATCAGTGTCGGATCCGCCGCAGCCTTAACCCCAGACGACGTAGT
ATTCGCCCAGTACCGCGAAGCAGGCGTCTTCCAGCAACGAGGCTTCACCC
TGAAAAACTTCATGAGCCAACTGTTTGCCAATAGATTCGACAACAGCAAG
GGCCGTAACATGCCAGTACATTATGGGTGCAACTATCCCCGAACACACAC
AATCTCCTCCCCGCTTGCAACCCAAATACCCCAAGCATCCGGTGCTGCCT
ACGCTCTCAAGTTACAATCACTCCAGAACCCCGATACCCCGGCGCGAATC
GTTGCCTGCTATTTCGGCGAAGGAGCCGCCAGCGAAGGTGACTTCCATGC
GGGCTTGAATATAGCCGCGACGCGGTCCTGTCCCGTGGTGTTCATCTGCC
GCAACAATGGGTATGCGATCTCCACCCCTACACTAGAACAATACCGGGGC
GACGGTATCGCTAGCCGCGGTGTTGGCTACGGCATTGACACCATCCGGGT
GGACGGCAACGACATCTTCGCCGTCTACGAGGCAATGCGTGAAGCTCGTC
GCCTCGCGCTCCAAGACGGAGGTAAACCCGTCCTCATCGAAGCAATGAGT
TACCGTGTATCGCACCACAGCACCAGCGATGATAGCTTTGCGTACCGGGC
AAGGGTTGAAGTCGAGGACTGGAAACGGCGTGATAACCCAATTATCCGGT
TGCGGAAGTGGTTGGAAAATGAAGGTCACTGGAGTGAAGATCTAGAGCGG
GAAACGCGCGATAAGATTCGAAAGGAGGTGCTCAGGGAGTTTGGGGAGGC
AGAGCGGGAGAAGAAGCCCCCATTGAGGGAAGCGTTTGAGGGGGTTTATG
ACGAGTTGACAGAGGAGGCGGAGGCTCAGATGAAGGAGCTGAAGAGGATA
TTGGAGACATATCCTGAGGAATATGATTTGCATCAGTTCCAGGATGGCGT
GAATGGGTTACGATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009083branched-chain amino acid catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016624oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:00038633-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006139ATCC10864_006139Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006139-T1.exon1ATCC10864_006139-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006139-T1.exon2ATCC10864_006139-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006139-T1.exon3ATCC10864_006139-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006139-T1.exon4ATCC10864_006139-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006139-T1.cdsATCC10864_006139-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006139-T1ATCC10864_006139-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00676
InterProIPR034616
InterProIPR001017
InterProIPR029061
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:897913..899321 +
Powered by Drupal