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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000164:914219..914795+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_006143-T1 ID=ATCC10864_006143-T1|Name=ATCC10864_006143-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=577bp|location=Sequence derived from alignment at MCQH01000164:914219..914795+ (Aspergillus niger ATCC 10864)
ATGCAGTATCCATCTTGGCCAGAACAACCGACCTTCAGGATATCCTCGAC
CGGTTCGCACAACTACAGCGATGTGGTGAGGGCCATCCGATCCCCCTCTC
GTCTATCTACCAGTCCGAAAGTTAACTGAGGATCTCAAGGGTAGTGCATC
TCATGCATTGTCCTCCCACAGAGCGGAGCATCCTTTGACTAGCAAGAAGA
TGGCAATTCCTAGGCTAGCAGAAGGGCTGGAAACATTCTCAACTCCAGGT
AGATTTCATCGTCGCCACGTGAGCCGAGCATGTGAATCCTGCAGACAGAG
AAAGACAAAGTGCACTGGAGATAAGTCCGGTTGTCGCAACTGCCGTGAGG
CTGGCATCATTTGCTGCTATACAGATGGTAAAAGGGAGAAATCCAAGAGG
TGAGTCTGAATCTGATTAGATGGCTCCGTGGCTGACTTCAGAGAAATTGG
TACGCCAAGGCAATTGGCTAGCTTGGAGGCCAAAATACGGACTTACGAAG
ATGCTTTGAAGAACCTGAGCAGCAGATTTGGGATTACGAATGAGCAGCTG
ATGAACCTTGCATTGACTGTGGTATGA back to topCoding sequence (CDS) from alignment at MCQH01000164:914219..914795+ >ATCC10864_006143-T1 ID=ATCC10864_006143-T1|Name=ATCC10864_006143-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1413bp|location=Sequence derived from alignment at MCQH01000164:914219..914795+ (Aspergillus niger ATCC 10864)
ATGCAGTATCCATCTTGGCCAGAACAACCGACCTTCAGGATATCCTCGAC
CGGTTCGCACAACTACAGCGATGTGTTAACTGAGGATCTCAAGGGTAGTG
CATCTCATGCATTGTCCTCCCACAGAGCGGAGCATCCTTTGACTAGCAAG
AAGATGGCAATTCCTAGGCTAGCAGAAGGGCTGGAAACATTCTCAACTCC
AGGTAGATTTCATCGTCGCCACGTGAGCCGAGCATGTGAATCCTGCAGAC
AGAGAAAGACAAAGTGCACTGGAGATAAGTCCGGTTGTCGCAACTGCCGT
GAGGCTGGCATCATTTGCTGCTATACAGATGGTAAAAGGGAGAAATCCAA
GAGGCAATTGGCTAGCTTGGAGGCCAAAATACGGACTTACGAAGATGCTT
TGAAGAACCTGAGCAGCAGATTTGGGATTACGAATGAGCAGCTGATGAAC
CTTGCATTGACTGTGGTATGAATGCAGTATCCATCTTGGCCAGAACAACC
GACCTTCAGGATATCCTCGACCGGTTCGCACAACTACAGCGATGTGTTAA
CTGAGGATCTCAAGGGTAGTGCATCTCATGCATTGTCCTCCCACAGAGCG
GAGCATCCTTTGACTAGCAAGAAGATGGCAATTCCTAGGCTAGCAGAAGG
GCTGGAAACATTCTCAACTCCAGGTAGATTTCATCGTCGCCACGTGAGCC
GAGCATGTGAATCCTGCAGACAGAGAAAGACAAAGTGCACTGGAGATAAG
TCCGGTTGTCGCAACTGCCGTGAGGCTGGCATCATTTGCTGCTATACAGA
TGGTAAAAGGGAGAAATCCAAGAGGCAATTGGCTAGCTTGGAGGCCAAAA
TACGGACTTACGAAGATGCTTTGAAGAACCTGAGCAGCAGATTTGGGATT
ACGAATGAGCAGCTGATGAACCTTGCATTGACTGTGGTATGAATGCAGTA
TCCATCTTGGCCAGAACAACCGACCTTCAGGATATCCTCGACCGGTTCGC
ACAACTACAGCGATGTGTTAACTGAGGATCTCAAGGGTAGTGCATCTCAT
GCATTGTCCTCCCACAGAGCGGAGCATCCTTTGACTAGCAAGAAGATGGC
AATTCCTAGGCTAGCAGAAGGGCTGGAAACATTCTCAACTCCAGGTAGAT
TTCATCGTCGCCACGTGAGCCGAGCATGTGAATCCTGCAGACAGAGAAAG
ACAAAGTGCACTGGAGATAAGTCCGGTTGTCGCAACTGCCGTGAGGCTGG
CATCATTTGCTGCTATACAGATGGTAAAAGGGAGAAATCCAAGAGGCAAT
TGGCTAGCTTGGAGGCCAAAATACGGACTTACGAAGATGCTTTGAAGAAC
CTGAGCAGCAGATTTGGGATTACGAATGAGCAGCTGATGAACCTTGCATT
GACTGTGGTATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR001138 |
| PFAM | PF00172 |
| InterPro | IPR036864 |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1000164.2 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000164 | supercontig | MCQH01000164:914219..914795 + |
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