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ATCC10864_006153-T1, ATCC10864_006153-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006153-T1
Unique NameATCC10864_006153-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:937930..938746-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006153-T1 ID=ATCC10864_006153-T1|Name=ATCC10864_006153-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=817bp|location=Sequence derived from alignment at MCQH01000164:937930..938746- (Aspergillus niger ATCC 10864)
ATGCTCGCGTGGTGAGTTGAGCAATACCTACCCAATCACCACGGCTGCGA
CCTCCACCCCCCAGACTAACAATAGTAAACTATAGGTACCAGAGATGTCT
TATCCAGCGTCCTCTCTTGACGCAGAGCCTCACCACAGCGGTAAGCTTCA
ATCCCCCCCATATCTCATTCTTTCAGTAAAGCTAAGACGGAAATAATCAG
ACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTCGAAAAGAA
GGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGCTTTATACG
GTGGTGGTAAGCCCAGCCCCCGATCCCTCACCCCCCTTCATTCCCTCTAA
ACAAAAGCAAAAATAATATACAGCTGTTTTCGGCCCGGTCGCCACAAAAT
GGTTCCAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACT
CTTGCGGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGAT
TGGTGTCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGG
AGAAGCTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTC
TGGCCAGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCG
TGTGTTGACGGTTAATGTGGTTAATATTGGTATGTATATTTCTCTGCTTC
TTTTCTACGGATGTATCTTGGATATTGGGTAAAGCTAATACTTGGATAGG
ATGGAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGG
TTGCACCGGGAGTTTGA
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Coding sequence (CDS) from alignment at MCQH01000164:937930..938746-

>ATCC10864_006153-T1 ID=ATCC10864_006153-T1|Name=ATCC10864_006153-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2730bp|location=Sequence derived from alignment at MCQH01000164:937930..938746- (Aspergillus niger ATCC 10864)
GATGGAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAG
GTTGCACCGGGAGTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTC
CAATTCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGC
GGCGCGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTG
TCTTCCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAG
CTCAGTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCC
AGCGGTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGT
TGACGGTTAATGTGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCT
CGCCCAACAAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCC
GAACTGGCCGAATGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCC
AGCGTCCTCTCTTGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATG
GAATTGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTG
CACCGGGAGTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAAT
TCCTACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCG
CGCGTTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTT
CCTCACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCA
GTAGGACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCG
GTTCAGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGAC
GGTTAATGTGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCC
CAACAAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAAC
TGGCCGAATGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCG
TCCTCTCTTGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATGGAAT
TGCTTCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACC
GGGAGTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCT
ACAGAACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCG
TTGGTGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTC
ACCAGTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAG
GACGTACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTC
AGACGCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTT
AATGTGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAAC
AAGCCGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGC
CGAATGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCGTCCT
CTCTTGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATGGAATTGCT
TCCTGAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACCGGGA
GTTTGACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCTACAG
AACCGCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCGTTGG
TGCTGACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTCACCA
GTATGTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAGGACG
TACTGGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTCAGAC
GCTGAACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTTAATG
TGGTTAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGC
CGTCGAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAA
TGGCTTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCT
TGACGCAGAGCCTCACCACAGCGATGCTCGCGTGGATGGAATTGCTTCCT
GAGCTTGGTCAATAGCGTCCCTCATGGGGATGAGGTTGCACCGGGAGTTT
GACTGTTTTCGGCCCGGTCGCCACAAAATGGTTCCAATTCCTACAGAACC
GCGTCCAGCTATCAACACCAACCAAGACTCTTGCGGCGCGCGTTGGTGCT
GACCAGCTCGTCTGCGCTCCTACTATGATTGGTGTCTTCCTCACCAGTAT
GTCTGTCATGGAGGGTGTCAACCCCCAGGAGAAGCTCAGTAGGACGTACT
GGGATGCGCTGCGCGCCAATTGGATGCTCTGGCCAGCGGTTCAGACGCTG
AACCTTGCTTTGGTGCCGTTGCAGTATCGTGTGTTGACGGTTAATGTGGT
TAATATTGACCCTCTTCGCAGTAGGTGACGGCCTCGCCCAACAAGCCGTC
GAAAAGAAGGGCCTGCCCAATCATGATGTAACCCGAACTGGCCGAATGGC
TTTATACGGTGGTGGTACCAGAGATGTCTTATCCAGCGTCCTCTCTTGAC
GCAGAGCCTCACCACAGCGATGCTCGCGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYM1_2ATCC10864_006153Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006153-T1ATCC10864_006153-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006153-T1.cdsATCC10864_006153-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006153-T1.exon5ATCC10864_006153-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_006153-T1.exon4ATCC10864_006153-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006153-T1.exon3ATCC10864_006153-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006153-T1.exon2ATCC10864_006153-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006153-T1.exon1ATCC10864_006153-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007248
PFAMPF04117
Properties
Property NameValue
ProductProtein required for ethanol metabolism
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:937930..938746 -
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