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ATCC10864_006172-T1, ATCC10864_006172-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006172-T1
Unique NameATCC10864_006172-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:976976..978549-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006172-T1 ID=ATCC10864_006172-T1|Name=ATCC10864_006172-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1574bp|location=Sequence derived from alignment at MCQH01000164:976976..978549- (Aspergillus niger ATCC 10864)
ATGGCGGGGAATCAGTGGCTAAGATGTGTGCTGGTCCTGGCCCTGGCGGT
ACTTGGGGTCCAAGGTATCAGTCTTGATATCAGCAGCGAGGGTAGGTGGT
TCTGAAGCTGTAGTTGCTAATCGGGCCTGATATATGGTTCATGGCCCATT
TCCCGCAACTCAAATGCAGGTGAACCTAACAGCTTTATTCAGATTCGATC
AAAAATGCAGCATCAATCGCCGCCTACGGCATGATGAAGCACTACAAAGG
AAACGAGTCCGGCGAAATCCCGGGCAAGATCCCCAACACTTGGTGGGAAG
GTGGCGCCATGTTCATGACACTCATGCAATACTATCACTACACGGGGGAT
TCCACCTACAACAAGGAAGTCATCCAGGGCATGCAGTGGCAGGCGGGCGA
TTGTGACTACATGCCGGCGAACTGGAGTAGCTACATTGTGAGTTCCTCGC
TTATGGCAGCCCCTTTCCCCTACTAATTGAGGATCTCAGGGAAATGACGA
TCAAATGTTCTGGGGCTTGGCCGCTATGACTGGTGCTGAACTGAACTTTC
CCGACTCTAGCGATGGGTACTCCTGGCTTTCTCTAGCACAGGGTGTTTTC
AACACCCAGGTCGCCCGCTGGGATAATTCTACCTGCAACGGGGGTATGCG
GTGGCAGATTTATACCTACGAATCCGGTTATACCATGAAGAACGCCATTT
CCAACGGTGGTCTGTTTCAATTATCGGCTCGTCTGGCGCGCTATACTAGC
AACCAGACCTACTATGACTGGGCAGAGCGCATCTGGGACTGGTCGGTCAC
GACGCCACTGTTGAGCAACTCAACCTGGAACGTCGCAGACTCGACGTCAA
CCACAAACGACTGCAGCACCCAGGGCGATAACCAGTGGAGCTATAACTAC
GGCGCCTACCTAGGAGGAGCCGCATACATGTACAATTACGTAGGTGGACC
CACCGCATTGAGAGACGATCAACTCCTAACCTATCACAGACCAACGGTAC
CAGCACCAAATGGATGAACGCTGTCGATGGCCTGTTGAATCGCACCTTGA
ACAAGTTCTTCCCCGCAAGCCACGGCGGTGAAATCCTGACGGAGATTCTA
TGCGAACCGACCGAGGTGTGCAACGACAACGAAATCATCTTCAAGGGCCT
GGTGTCTGCCTGGCTCGCCTACACAGCCTTACTGGTTCCATCCACCTACG
ATAGAATCCTGCCCAAGCTGCAGGGATCTGCCCAGGGCGCTGCCGCAACT
TGCACCGGTTATGGTAACAATACCTGCGGTGTGCGATGGTGGAACAGGAC
TTGGGATGGCTGGAGCGGTCTCGAGGAACAGATGAGCGTTACCAGCGTCT
TCTCGTCGAATATGATCGCCTTCTCCAACTCCTCGGCTGCACCGTTGACC
TCCAGCACGGGAGGCAACAGCACCAGCAATCCATCGGCCGGAACCGATGA
CAGCTCCGATGACAAGACGATCCTCAGCACGATTACCACGGGAGACCGTG
CGGGAGCGGGCATCGTGACAGTTGTTTTTGCTGGAGGATGGGTAGGGTTG
ATGGCATGGTTGATGCTCGGTTAA
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Coding sequence (CDS) from alignment at MCQH01000164:976976..978549-

>ATCC10864_006172-T1 ID=ATCC10864_006172-T1|Name=ATCC10864_006172-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5484bp|location=Sequence derived from alignment at MCQH01000164:976976..978549- (Aspergillus niger ATCC 10864)
ACCAACGGTACCAGCACCAAATGGATGAACGCTGTCGATGGCCTGTTGAA
TCGCACCTTGAACAAGTTCTTCCCCGCAAGCCACGGCGGTGAAATCCTGA
CGGAGATTCTATGCGAACCGACCGAGGTGTGCAACGACAACGAAATCATC
TTCAAGGGCCTGGTGTCTGCCTGGCTCGCCTACACAGCCTTACTGGTTCC
ATCCACCTACGATAGAATCCTGCCCAAGCTGCAGGGATCTGCCCAGGGCG
CTGCCGCAACTTGCACCGGTTATGGTAACAATACCTGCGGTGTGCGATGG
TGGAACAGGACTTGGGATGGCTGGAGCGGTCTCGAGGAACAGATGAGCGT
TACCAGCGTCTTCTCGTCGAATATGATCGCCTTCTCCAACTCCTCGGCTG
CACCGTTGACCTCCAGCACGGGAGGCAACAGCACCAGCAATCCATCGGCC
GGAACCGATGACAGCTCCGATGACAAGACGATCCTCAGCACGATTACCAC
GGGAGACCGTGCGGGAGCGGGCATCGTGACAGTTGTTTTTGCTGGAGGAT
GGGTAGGGTTGATGGCATGGTTGATGCTCGGTTAAGGAAATGACGATCAA
ATGTTCTGGGGCTTGGCCGCTATGACTGGTGCTGAACTGAACTTTCCCGA
CTCTAGCGATGGGTACTCCTGGCTTTCTCTAGCACAGGGTGTTTTCAACA
CCCAGGTCGCCCGCTGGGATAATTCTACCTGCAACGGGGGTATGCGGTGG
CAGATTTATACCTACGAATCCGGTTATACCATGAAGAACGCCATTTCCAA
CGGTGGTCTGTTTCAATTATCGGCTCGTCTGGCGCGCTATACTAGCAACC
AGACCTACTATGACTGGGCAGAGCGCATCTGGGACTGGTCGGTCACGACG
CCACTGTTGAGCAACTCAACCTGGAACGTCGCAGACTCGACGTCAACCAC
AAACGACTGCAGCACCCAGGGCGATAACCAGTGGAGCTATAACTACGGCG
CCTACCTAGGAGGAGCCGCATACATGTACAATTACATTCGATCAAAAATG
CAGCATCAATCGCCGCCTACGGCATGATGAAGCACTACAAAGGAAACGAG
TCCGGCGAAATCCCGGGCAAGATCCCCAACACTTGGTGGGAAGGTGGCGC
CATGTTCATGACACTCATGCAATACTATCACTACACGGGGGATTCCACCT
ACAACAAGGAAGTCATCCAGGGCATGCAGTGGCAGGCGGGCGATTGTGAC
TACATGCCGGCGAACTGGAGTAGCTACATTATGGCGGGGAATCAGTGGCT
AAGATGTGTGCTGGTCCTGGCCCTGGCGGTACTTGGGGTCCAAGGTATCA
GTCTTGATATCAGCAGCGAGGACCAACGGTACCAGCACCAAATGGATGAA
CGCTGTCGATGGCCTGTTGAATCGCACCTTGAACAAGTTCTTCCCCGCAA
GCCACGGCGGTGAAATCCTGACGGAGATTCTATGCGAACCGACCGAGGTG
TGCAACGACAACGAAATCATCTTCAAGGGCCTGGTGTCTGCCTGGCTCGC
CTACACAGCCTTACTGGTTCCATCCACCTACGATAGAATCCTGCCCAAGC
TGCAGGGATCTGCCCAGGGCGCTGCCGCAACTTGCACCGGTTATGGTAAC
AATACCTGCGGTGTGCGATGGTGGAACAGGACTTGGGATGGCTGGAGCGG
TCTCGAGGAACAGATGAGCGTTACCAGCGTCTTCTCGTCGAATATGATCG
CCTTCTCCAACTCCTCGGCTGCACCGTTGACCTCCAGCACGGGAGGCAAC
AGCACCAGCAATCCATCGGCCGGAACCGATGACAGCTCCGATGACAAGAC
GATCCTCAGCACGATTACCACGGGAGACCGTGCGGGAGCGGGCATCGTGA
CAGTTGTTTTTGCTGGAGGATGGGTAGGGTTGATGGCATGGTTGATGCTC
GGTTAAGGAAATGACGATCAAATGTTCTGGGGCTTGGCCGCTATGACTGG
TGCTGAACTGAACTTTCCCGACTCTAGCGATGGGTACTCCTGGCTTTCTC
TAGCACAGGGTGTTTTCAACACCCAGGTCGCCCGCTGGGATAATTCTACC
TGCAACGGGGGTATGCGGTGGCAGATTTATACCTACGAATCCGGTTATAC
CATGAAGAACGCCATTTCCAACGGTGGTCTGTTTCAATTATCGGCTCGTC
TGGCGCGCTATACTAGCAACCAGACCTACTATGACTGGGCAGAGCGCATC
TGGGACTGGTCGGTCACGACGCCACTGTTGAGCAACTCAACCTGGAACGT
CGCAGACTCGACGTCAACCACAAACGACTGCAGCACCCAGGGCGATAACC
AGTGGAGCTATAACTACGGCGCCTACCTAGGAGGAGCCGCATACATGTAC
AATTACATTCGATCAAAAATGCAGCATCAATCGCCGCCTACGGCATGATG
AAGCACTACAAAGGAAACGAGTCCGGCGAAATCCCGGGCAAGATCCCCAA
CACTTGGTGGGAAGGTGGCGCCATGTTCATGACACTCATGCAATACTATC
ACTACACGGGGGATTCCACCTACAACAAGGAAGTCATCCAGGGCATGCAG
TGGCAGGCGGGCGATTGTGACTACATGCCGGCGAACTGGAGTAGCTACAT
TATGGCGGGGAATCAGTGGCTAAGATGTGTGCTGGTCCTGGCCCTGGCGG
TACTTGGGGTCCAAGGTATCAGTCTTGATATCAGCAGCGAGGACCAACGG
TACCAGCACCAAATGGATGAACGCTGTCGATGGCCTGTTGAATCGCACCT
TGAACAAGTTCTTCCCCGCAAGCCACGGCGGTGAAATCCTGACGGAGATT
CTATGCGAACCGACCGAGGTGTGCAACGACAACGAAATCATCTTCAAGGG
CCTGGTGTCTGCCTGGCTCGCCTACACAGCCTTACTGGTTCCATCCACCT
ACGATAGAATCCTGCCCAAGCTGCAGGGATCTGCCCAGGGCGCTGCCGCA
ACTTGCACCGGTTATGGTAACAATACCTGCGGTGTGCGATGGTGGAACAG
GACTTGGGATGGCTGGAGCGGTCTCGAGGAACAGATGAGCGTTACCAGCG
TCTTCTCGTCGAATATGATCGCCTTCTCCAACTCCTCGGCTGCACCGTTG
ACCTCCAGCACGGGAGGCAACAGCACCAGCAATCCATCGGCCGGAACCGA
TGACAGCTCCGATGACAAGACGATCCTCAGCACGATTACCACGGGAGACC
GTGCGGGAGCGGGCATCGTGACAGTTGTTTTTGCTGGAGGATGGGTAGGG
TTGATGGCATGGTTGATGCTCGGTTAAGGAAATGACGATCAAATGTTCTG
GGGCTTGGCCGCTATGACTGGTGCTGAACTGAACTTTCCCGACTCTAGCG
ATGGGTACTCCTGGCTTTCTCTAGCACAGGGTGTTTTCAACACCCAGGTC
GCCCGCTGGGATAATTCTACCTGCAACGGGGGTATGCGGTGGCAGATTTA
TACCTACGAATCCGGTTATACCATGAAGAACGCCATTTCCAACGGTGGTC
TGTTTCAATTATCGGCTCGTCTGGCGCGCTATACTAGCAACCAGACCTAC
TATGACTGGGCAGAGCGCATCTGGGACTGGTCGGTCACGACGCCACTGTT
GAGCAACTCAACCTGGAACGTCGCAGACTCGACGTCAACCACAAACGACT
GCAGCACCCAGGGCGATAACCAGTGGAGCTATAACTACGGCGCCTACCTA
GGAGGAGCCGCATACATGTACAATTACATTCGATCAAAAATGCAGCATCA
ATCGCCGCCTACGGCATGATGAAGCACTACAAAGGAAACGAGTCCGGCGA
AATCCCGGGCAAGATCCCCAACACTTGGTGGGAAGGTGGCGCCATGTTCA
TGACACTCATGCAATACTATCACTACACGGGGGATTCCACCTACAACAAG
GAAGTCATCCAGGGCATGCAGTGGCAGGCGGGCGATTGTGACTACATGCC
GGCGAACTGGAGTAGCTACATTATGGCGGGGAATCAGTGGCTAAGATGTG
TGCTGGTCCTGGCCCTGGCGGTACTTGGGGTCCAAGGTATCAGTCTTGAT
ATCAGCAGCGAGGACCAACGGTACCAGCACCAAATGGATGAACGCTGTCG
ATGGCCTGTTGAATCGCACCTTGAACAAGTTCTTCCCCGCAAGCCACGGC
GGTGAAATCCTGACGGAGATTCTATGCGAACCGACCGAGGTGTGCAACGA
CAACGAAATCATCTTCAAGGGCCTGGTGTCTGCCTGGCTCGCCTACACAG
CCTTACTGGTTCCATCCACCTACGATAGAATCCTGCCCAAGCTGCAGGGA
TCTGCCCAGGGCGCTGCCGCAACTTGCACCGGTTATGGTAACAATACCTG
CGGTGTGCGATGGTGGAACAGGACTTGGGATGGCTGGAGCGGTCTCGAGG
AACAGATGAGCGTTACCAGCGTCTTCTCGTCGAATATGATCGCCTTCTCC
AACTCCTCGGCTGCACCGTTGACCTCCAGCACGGGAGGCAACAGCACCAG
CAATCCATCGGCCGGAACCGATGACAGCTCCGATGACAAGACGATCCTCA
GCACGATTACCACGGGAGACCGTGCGGGAGCGGGCATCGTGACAGTTGTT
TTTGCTGGAGGATGGGTAGGGTTGATGGCATGGTTGATGCTCGGTTAAGG
AAATGACGATCAAATGTTCTGGGGCTTGGCCGCTATGACTGGTGCTGAAC
TGAACTTTCCCGACTCTAGCGATGGGTACTCCTGGCTTTCTCTAGCACAG
GGTGTTTTCAACACCCAGGTCGCCCGCTGGGATAATTCTACCTGCAACGG
GGGTATGCGGTGGCAGATTTATACCTACGAATCCGGTTATACCATGAAGA
ACGCCATTTCCAACGGTGGTCTGTTTCAATTATCGGCTCGTCTGGCGCGC
TATACTAGCAACCAGACCTACTATGACTGGGCAGAGCGCATCTGGGACTG
GTCGGTCACGACGCCACTGTTGAGCAACTCAACCTGGAACGTCGCAGACT
CGACGTCAACCACAAACGACTGCAGCACCCAGGGCGATAACCAGTGGAGC
TATAACTACGGCGCCTACCTAGGAGGAGCCGCATACATGTACAATTACAT
TCGATCAAAAATGCAGCATCAATCGCCGCCTACGGCATGATGAAGCACTA
CAAAGGAAACGAGTCCGGCGAAATCCCGGGCAAGATCCCCAACACTTGGT
GGGAAGGTGGCGCCATGTTCATGACACTCATGCAATACTATCACTACACG
GGGGATTCCACCTACAACAAGGAAGTCATCCAGGGCATGCAGTGGCAGGC
GGGCGATTGTGACTACATGCCGGCGAACTGGAGTAGCTACATTATGGCGG
GGAATCAGTGGCTAAGATGTGTGCTGGTCCTGGCCCTGGCGGTACTTGGG
GTCCAAGGTATCAGTCTTGATATCAGCAGCGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006172ATCC10864_006172Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006172-T1ATCC10864_006172-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006172-T1.cdsATCC10864_006172-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006172-T1.exon4ATCC10864_006172-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006172-T1.exon3ATCC10864_006172-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006172-T1.exon2ATCC10864_006172-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006172-T1.exon1ATCC10864_006172-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03663
InterProIPR008928
InterProIPR014480
InterProIPR005198
Properties
Property NameValue
NoteCAZy:GH76
NoteSECRETED:SignalP(1-22)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:976976..978549 -
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