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ATCC10864_006183-T1, ATCC10864_006183-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006183-T1
Unique NameATCC10864_006183-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:1011962..1013179+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006183-T1 ID=ATCC10864_006183-T1|Name=ATCC10864_006183-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1218bp|location=Sequence derived from alignment at MCQH01000164:1011962..1013179+ (Aspergillus niger ATCC 10864)
ATGGCGTCAACGTCTCAACCCCCTCTCCGGTTCACTTCCCACAAGAACTT
TGTGTACCGTCTCGTCTTCGCTACGTTGACCGGCCGCACGATTCAGATCT
CCCAGATTCGTCCTTCGTCGCCTACGAATCCCGGTCTCGCTCCTCATGAA
ATCTCGTTCCTTCGTCTTCTGGAGTCCATTACCAATGGCTCCCAGATGGA
GATCTCGTACACCGGTACTATCCTTGTTTATAAGCCCGGCCTCATTACAG
GCAGTTCGCCAGGTGTGGCCACGAGCAGCGGAGGCGTCATCCGGCACGAG
CTCCCAGCAGGGTGCAATCGTGGCGTGAGTTATTATCTGCTGCCGCTCTG
CCTTTTGGCACCCTTTTCCAAGGCTCCCATCAAGGTCCTCTTTACTGGTC
CAGGTGTGATTACCTCGTCCACCCCGACTGGTGACATGTCCGTGGACAGT
GTGCGAACCGCCATTCTCCCTCTCTACAACCAATTTGGAATCTTTAACAA
CATCGAGCTGCGTATCCTACGGCGATCGAACCCTGGACCCAATGGCAGAG
GCGGTGGTGGAGAAGTCCAGCTAGTATTTGGCCACCAGCTCCGGCTGCCG
AAGACCCTGCACCTCATGAACGCCGGTCGCATCAAGAAGGTCCGCGGTGT
GGCCTACTCTGTCGGTGTTTCCGCATCCAATAACGCACGAATGATCGAAA
CCGCCCGTGGTGTTTTGAACCCACTCGTCCCTGACACCTATGTCTTCTCT
GATGTGTCGTCGGCGCCGCTCGTACCTGCTCCCGAGAAGAGCAACCCTTC
CGCGAAAAAGAAGATTGGCCTTGGATTTGGACTCTCGTTGGTTGCAGAGT
CATCTACTGGCTGCCTGTTCTCCGCCGATGTGGCGTCGCCTCCCGCAGGC
GGCGAGGCGCCTGAAGACATTGGGAAGCGATGTGCTTACCAGCTACTTGA
GGCCGTTTCGAAGGGAGGTTGCGTTGCCCCTGCAGCTGTTCCGACCATGC
TGGGTCTGATGACGATGGGATCGGAGGATGTTGGACGAATCCAGGTTGGT
CGGGAGGTGATCGCCGAGGAGAGCACCATCCAGCTGGCCAGGGACCTGAC
CAAGTTCGGTGCTCCGGGTTGGGGTCTGAGAGACGCGAGTGGTGAGAATG
AGAATGGGGATGTGATCATCAGCGTGGTTGGCCGCGGCATTGGCAACGTT
GGCCGTAAGGTTGCTTGA
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Coding sequence (CDS) from alignment at MCQH01000164:1011962..1013179+

>ATCC10864_006183-T1 ID=ATCC10864_006183-T1|Name=ATCC10864_006183-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1218bp|location=Sequence derived from alignment at MCQH01000164:1011962..1013179+ (Aspergillus niger ATCC 10864)
ATGGCGTCAACGTCTCAACCCCCTCTCCGGTTCACTTCCCACAAGAACTT
TGTGTACCGTCTCGTCTTCGCTACGTTGACCGGCCGCACGATTCAGATCT
CCCAGATTCGTCCTTCGTCGCCTACGAATCCCGGTCTCGCTCCTCATGAA
ATCTCGTTCCTTCGTCTTCTGGAGTCCATTACCAATGGCTCCCAGATGGA
GATCTCGTACACCGGTACTATCCTTGTTTATAAGCCCGGCCTCATTACAG
GCAGTTCGCCAGGTGTGGCCACGAGCAGCGGAGGCGTCATCCGGCACGAG
CTCCCAGCAGGGTGCAATCGTGGCGTGAGTTATTATCTGCTGCCGCTCTG
CCTTTTGGCACCCTTTTCCAAGGCTCCCATCAAGGTCCTCTTTACTGGTC
CAGGTGTGATTACCTCGTCCACCCCGACTGGTGACATGTCCGTGGACAGT
GTGCGAACCGCCATTCTCCCTCTCTACAACCAATTTGGAATCTTTAACAA
CATCGAGCTGCGTATCCTACGGCGATCGAACCCTGGACCCAATGGCAGAG
GCGGTGGTGGAGAAGTCCAGCTAGTATTTGGCCACCAGCTCCGGCTGCCG
AAGACCCTGCACCTCATGAACGCCGGTCGCATCAAGAAGGTCCGCGGTGT
GGCCTACTCTGTCGGTGTTTCCGCATCCAATAACGCACGAATGATCGAAA
CCGCCCGTGGTGTTTTGAACCCACTCGTCCCTGACACCTATGTCTTCTCT
GATGTGTCGTCGGCGCCGCTCGTACCTGCTCCCGAGAAGAGCAACCCTTC
CGCGAAAAAGAAGATTGGCCTTGGATTTGGACTCTCGTTGGTTGCAGAGT
CATCTACTGGCTGCCTGTTCTCCGCCGATGTGGCGTCGCCTCCCGCAGGC
GGCGAGGCGCCTGAAGACATTGGGAAGCGATGTGCTTACCAGCTACTTGA
GGCCGTTTCGAAGGGAGGTTGCGTTGCCCCTGCAGCTGTTCCGACCATGC
TGGGTCTGATGACGATGGGATCGGAGGATGTTGGACGAATCCAGGTTGGT
CGGGAGGTGATCGCCGAGGAGAGCACCATCCAGCTGGCCAGGGACCTGAC
CAAGTTCGGTGCTCCGGGTTGGGGTCTGAGAGACGCGAGTGGTGAGAATG
AGAATGGGGATGTGATCATCAGCGTGGTTGGCCGCGGCATTGGCAACGTT
GGCCGTAAGGTTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006183ATCC10864_006183Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006183-T1.exon1ATCC10864_006183-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006183-T1.cdsATCC10864_006183-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006183-T1ATCC10864_006183-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR016443
InterProIPR000228
InterProIPR013792
PFAMPF05189
InterProIPR037136
InterProIPR013791
InterProIPR023797
PFAMPF01137
InterProIPR036553
Properties
Property NameValue
NoteBUSCO:EOG0926307V
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:1011962..1013179 +
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