You are here

Home

ATCC10864_006203-T1, ATCC10864_006203-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006203-T1
Unique NameATCC10864_006203-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:1081927..1084106-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006203-T1 ID=ATCC10864_006203-T1|Name=ATCC10864_006203-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2180bp|location=Sequence derived from alignment at MCQH01000164:1081927..1084106- (Aspergillus niger ATCC 10864)
ATGTCCTCGGCTATGCAACAGCGCAAGGTCGAGATCCTTGCCAAGAGAGC
CAAACTCGCCGAACTGAAGCGGCAGAGAGAGCTGCGGCAGAAGGGATTCT
CGCAAACCCGAGCTAACACCGGCGATGCTTCTGAGGTAGAGAGACCCTTT
CCCCCTCACTCATGGTCTCCCATGTCGCTTGGAAAAGGGCCAGCGCTCAA
GTCTACTTGTCTTTCTAGGTCGTCTCCCCTGCCCCCAGCCGCGCAGATAG
TCGAGCTGAGCTCGATGATCTTATCTCACGTTTAGTTGACCGCCCGGGGT
CGGCTTCCATCAGCCACGGAGCCGATGGCCTGTCACGGAAAGGAAGTAGG
CCTAACTCGGTGCTGAGTGCTAGCCAGCTCAGTGGCGACAACACGGAAGC
GTTCAGTCCAACTACGCGACCACTCTCACAGTCAATTGCTGTTCAAACGG
TCGGAACGGAGCCGTTTGTCGCGGCTCCTGAGCCGCAGCCCGCCCCTGAG
CCCAAACCCGAAGTTGTCACATACAGTAAAGGAGTCCAGACAGAGGAGTT
GAAACCGTCCGGCACCACAGAGTCAGATGATGAAGAAAACAATGGCAGCA
AAAGAGATAGCGAACGCGACGAAGAGATCCGGAGGAAGCTCCGAAAAGAG
ATCGAGGAGGAGCTGCAGGCCACTCAGCAGCACGCTGACAATGAAGCCAG
CGCCGAGGCCTCAAATATGCGTTACCCGCTCCGTACATTAGATGATGACG
AATTAAAGGCTGTCACGTCCTCCGAGGACTTTCTGGATTTCGTTGAACGA
TCAGCTAAAGTCATTGAGCGGGCACTGGACGAGGAATACGACGTGCTAGC
AGACTACGAGCTTGGAGGCGTGGATGGTGAACTAGAAGACGACGATGAAC
ATGGACGGAAACGGCGCGGGATTAGGGAGGTCTGCCAGTTCTGGGACGAG
CGATGGAGCAAGAAGCGAATGATCAGTGATCTAAGCTTTTCGCCAAAGGT
TTGTCGCTCTAAGAGCCATCATGAGCTTCGCATTGAGATCTGACACCCCC
CACAGTTTCCCGAACTTGTTCTGGCTGCATACACCAAGAACCCTTCTGCC
CCTCATGAGCCCGATGGTCTCGTCCAGATCTGGAACCAACACCTTCACTC
TCGACCGGAGTATGTCTTTCATTCTACCTCCGACATTTTAGCCGCCAAAT
TCTCTCCATTCCACCCTAATCTCATTGTTGGCGGTTCGTACTCAGGGCAG
GTACTGCTTTGGGATACTCGGTCGTCGCGCGCAGGCGGTGGCGCCCCGGT
CCAGAAGACGCCGTTGACTGGCTCTGGGCATACGCACCCGGTCTACAGTA
TTTCCATCATTGGAACACAGAATGCCCATAACATTTTGACCGCATCAACA
GATGGCGTGGTCTGCGGTTGGACGGTCGACATGCTTTCTCAGCCTCAAGA
ATACCTCGAGCTATCTACCCCCCCGCCCTCGAAAACAGAAGATCTTGCAC
CCACGACGATGTCATTTCCGCAGTCCGACCCCACGTTTTTCATCGTTGGT
ACTGAGGAAGGAGGAATTTACCCATGCCACCGTTACGATAGAGCCGGGGC
CAAGGCTGGTACCGACCATCGCCTTGTGTATCGCGGTCATAAAGCCCCAA
TCATGTCTACTGCATTCCATCCGGCTCGCGGTCCAGTTGATCTGGGCGAT
CTCATGCTTAGCTCTAGTCTGGATTGGAGCGTGAGACTCTGGCGCATCCG
TCCGCCGGCAACGACTGCCCCAGCAACCTCCGCCATAGCCACAACTCAGG
TTGTGGAGCCTATTCTTGACATTAATCGTGAGGACGTCGTGTACGATGCA
CGATGGTCCCCTCACCGCCCCGGTGTCTTCTCTCTCGTCGACGGTGCTGG
AAACCTCGAAGTCTGGGATCTCTACACAGACACCGAAGTCCCCGTCGTGA
AGACGACACCGTCCAAGGGCCGTGGAGGTATATTAACGAGGAGTCTCAAC
AAGGTAGCCTGGGAAGAGCGCGAGGGCAGGCGCATTGCAACGGGTGGGCT
TGATGGTGTCGTTACTGTCTTTGAAGTCGGAAAGGGTCTCAGCGGTACTC
CAGAAGACGTTCCTGCCGATGAATGGGCGGGCATGAAGAAACTCGTTGGT
AAGTTGGAGCAGCAGGACCGGAACAACTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000164:1081927..1084106-

>ATCC10864_006203-T1 ID=ATCC10864_006203-T1|Name=ATCC10864_006203-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6120bp|location=Sequence derived from alignment at MCQH01000164:1081927..1084106- (Aspergillus niger ATCC 10864)
TTTCCCGAACTTGTTCTGGCTGCATACACCAAGAACCCTTCTGCCCCTCA
TGAGCCCGATGGTCTCGTCCAGATCTGGAACCAACACCTTCACTCTCGAC
CGGAGTATGTCTTTCATTCTACCTCCGACATTTTAGCCGCCAAATTCTCT
CCATTCCACCCTAATCTCATTGTTGGCGGTTCGTACTCAGGGCAGGTACT
GCTTTGGGATACTCGGTCGTCGCGCGCAGGCGGTGGCGCCCCGGTCCAGA
AGACGCCGTTGACTGGCTCTGGGCATACGCACCCGGTCTACAGTATTTCC
ATCATTGGAACACAGAATGCCCATAACATTTTGACCGCATCAACAGATGG
CGTGGTCTGCGGTTGGACGGTCGACATGCTTTCTCAGCCTCAAGAATACC
TCGAGCTATCTACCCCCCCGCCCTCGAAAACAGAAGATCTTGCACCCACG
ACGATGTCATTTCCGCAGTCCGACCCCACGTTTTTCATCGTTGGTACTGA
GGAAGGAGGAATTTACCCATGCCACCGTTACGATAGAGCCGGGGCCAAGG
CTGGTACCGACCATCGCCTTGTGTATCGCGGTCATAAAGCCCCAATCATG
TCTACTGCATTCCATCCGGCTCGCGGTCCAGTTGATCTGGGCGATCTCAT
GCTTAGCTCTAGTCTGGATTGGAGCGTGAGACTCTGGCGCATCCGTCCGC
CGGCAACGACTGCCCCAGCAACCTCCGCCATAGCCACAACTCAGGTTGTG
GAGCCTATTCTTGACATTAATCGTGAGGACGTCGTGTACGATGCACGATG
GTCCCCTCACCGCCCCGGTGTCTTCTCTCTCGTCGACGGTGCTGGAAACC
TCGAAGTCTGGGATCTCTACACAGACACCGAAGTCCCCGTCGTGAAGACG
ACACCGTCCAAGGGCCGTGGAGGTATATTAACGAGGAGTCTCAACAAGGT
AGCCTGGGAAGAGCGCGAGGGCAGGCGCATTGCAACGGGTGGGCTTGATG
GTGTCGTTACTGTCTTTGAAGTCGGAAAGGGTCTCAGCGGTACTCCAGAA
GACGTTCCTGCCGATGAATGGGCGGGCATGAAGAAACTCGTTGGTAAGTT
GGAGCAGCAGGACCGGAACAACTGAGTCGTCTCCCCTGCCCCCAGCCGCG
CAGATAGTCGAGCTGAGCTCGATGATCTTATCTCACGTTTAGTTGACCGC
CCGGGGTCGGCTTCCATCAGCCACGGAGCCGATGGCCTGTCACGGAAAGG
AAGTAGGCCTAACTCGGTGCTGAGTGCTAGCCAGCTCAGTGGCGACAACA
CGGAAGCGTTCAGTCCAACTACGCGACCACTCTCACAGTCAATTGCTGTT
CAAACGGTCGGAACGGAGCCGTTTGTCGCGGCTCCTGAGCCGCAGCCCGC
CCCTGAGCCCAAACCCGAAGTTGTCACATACAGTAAAGGAGTCCAGACAG
AGGAGTTGAAACCGTCCGGCACCACAGAGTCAGATGATGAAGAAAACAAT
GGCAGCAAAAGAGATAGCGAACGCGACGAAGAGATCCGGAGGAAGCTCCG
AAAAGAGATCGAGGAGGAGCTGCAGGCCACTCAGCAGCACGCTGACAATG
AAGCCAGCGCCGAGGCCTCAAATATGCGTTACCCGCTCCGTACATTAGAT
GATGACGAATTAAAGGCTGTCACGTCCTCCGAGGACTTTCTGGATTTCGT
TGAACGATCAGCTAAAGTCATTGAGCGGGCACTGGACGAGGAATACGACG
TGCTAGCAGACTACGAGCTTGGAGGCGTGGATGGTGAACTAGAAGACGAC
GATGAACATGGACGGAAACGGCGCGGGATTAGGGAGGTCTGCCAGTTCTG
GGACGAGCGATGGAGCAAGAAGCGAATGATCAGTGATCTAAGCTTTTCGC
CAAAGATGTCCTCGGCTATGCAACAGCGCAAGGTCGAGATCCTTGCCAAG
AGAGCCAAACTCGCCGAACTGAAGCGGCAGAGAGAGCTGCGGCAGAAGGG
ATTCTCGCAAACCCGAGCTAACACCGGCGATGCTTCTGAGTTTCCCGAAC
TTGTTCTGGCTGCATACACCAAGAACCCTTCTGCCCCTCATGAGCCCGAT
GGTCTCGTCCAGATCTGGAACCAACACCTTCACTCTCGACCGGAGTATGT
CTTTCATTCTACCTCCGACATTTTAGCCGCCAAATTCTCTCCATTCCACC
CTAATCTCATTGTTGGCGGTTCGTACTCAGGGCAGGTACTGCTTTGGGAT
ACTCGGTCGTCGCGCGCAGGCGGTGGCGCCCCGGTCCAGAAGACGCCGTT
GACTGGCTCTGGGCATACGCACCCGGTCTACAGTATTTCCATCATTGGAA
CACAGAATGCCCATAACATTTTGACCGCATCAACAGATGGCGTGGTCTGC
GGTTGGACGGTCGACATGCTTTCTCAGCCTCAAGAATACCTCGAGCTATC
TACCCCCCCGCCCTCGAAAACAGAAGATCTTGCACCCACGACGATGTCAT
TTCCGCAGTCCGACCCCACGTTTTTCATCGTTGGTACTGAGGAAGGAGGA
ATTTACCCATGCCACCGTTACGATAGAGCCGGGGCCAAGGCTGGTACCGA
CCATCGCCTTGTGTATCGCGGTCATAAAGCCCCAATCATGTCTACTGCAT
TCCATCCGGCTCGCGGTCCAGTTGATCTGGGCGATCTCATGCTTAGCTCT
AGTCTGGATTGGAGCGTGAGACTCTGGCGCATCCGTCCGCCGGCAACGAC
TGCCCCAGCAACCTCCGCCATAGCCACAACTCAGGTTGTGGAGCCTATTC
TTGACATTAATCGTGAGGACGTCGTGTACGATGCACGATGGTCCCCTCAC
CGCCCCGGTGTCTTCTCTCTCGTCGACGGTGCTGGAAACCTCGAAGTCTG
GGATCTCTACACAGACACCGAAGTCCCCGTCGTGAAGACGACACCGTCCA
AGGGCCGTGGAGGTATATTAACGAGGAGTCTCAACAAGGTAGCCTGGGAA
GAGCGCGAGGGCAGGCGCATTGCAACGGGTGGGCTTGATGGTGTCGTTAC
TGTCTTTGAAGTCGGAAAGGGTCTCAGCGGTACTCCAGAAGACGTTCCTG
CCGATGAATGGGCGGGCATGAAGAAACTCGTTGGTAAGTTGGAGCAGCAG
GACCGGAACAACTGAGTCGTCTCCCCTGCCCCCAGCCGCGCAGATAGTCG
AGCTGAGCTCGATGATCTTATCTCACGTTTAGTTGACCGCCCGGGGTCGG
CTTCCATCAGCCACGGAGCCGATGGCCTGTCACGGAAAGGAAGTAGGCCT
AACTCGGTGCTGAGTGCTAGCCAGCTCAGTGGCGACAACACGGAAGCGTT
CAGTCCAACTACGCGACCACTCTCACAGTCAATTGCTGTTCAAACGGTCG
GAACGGAGCCGTTTGTCGCGGCTCCTGAGCCGCAGCCCGCCCCTGAGCCC
AAACCCGAAGTTGTCACATACAGTAAAGGAGTCCAGACAGAGGAGTTGAA
ACCGTCCGGCACCACAGAGTCAGATGATGAAGAAAACAATGGCAGCAAAA
GAGATAGCGAACGCGACGAAGAGATCCGGAGGAAGCTCCGAAAAGAGATC
GAGGAGGAGCTGCAGGCCACTCAGCAGCACGCTGACAATGAAGCCAGCGC
CGAGGCCTCAAATATGCGTTACCCGCTCCGTACATTAGATGATGACGAAT
TAAAGGCTGTCACGTCCTCCGAGGACTTTCTGGATTTCGTTGAACGATCA
GCTAAAGTCATTGAGCGGGCACTGGACGAGGAATACGACGTGCTAGCAGA
CTACGAGCTTGGAGGCGTGGATGGTGAACTAGAAGACGACGATGAACATG
GACGGAAACGGCGCGGGATTAGGGAGGTCTGCCAGTTCTGGGACGAGCGA
TGGAGCAAGAAGCGAATGATCAGTGATCTAAGCTTTTCGCCAAAGATGTC
CTCGGCTATGCAACAGCGCAAGGTCGAGATCCTTGCCAAGAGAGCCAAAC
TCGCCGAACTGAAGCGGCAGAGAGAGCTGCGGCAGAAGGGATTCTCGCAA
ACCCGAGCTAACACCGGCGATGCTTCTGAGTTTCCCGAACTTGTTCTGGC
TGCATACACCAAGAACCCTTCTGCCCCTCATGAGCCCGATGGTCTCGTCC
AGATCTGGAACCAACACCTTCACTCTCGACCGGAGTATGTCTTTCATTCT
ACCTCCGACATTTTAGCCGCCAAATTCTCTCCATTCCACCCTAATCTCAT
TGTTGGCGGTTCGTACTCAGGGCAGGTACTGCTTTGGGATACTCGGTCGT
CGCGCGCAGGCGGTGGCGCCCCGGTCCAGAAGACGCCGTTGACTGGCTCT
GGGCATACGCACCCGGTCTACAGTATTTCCATCATTGGAACACAGAATGC
CCATAACATTTTGACCGCATCAACAGATGGCGTGGTCTGCGGTTGGACGG
TCGACATGCTTTCTCAGCCTCAAGAATACCTCGAGCTATCTACCCCCCCG
CCCTCGAAAACAGAAGATCTTGCACCCACGACGATGTCATTTCCGCAGTC
CGACCCCACGTTTTTCATCGTTGGTACTGAGGAAGGAGGAATTTACCCAT
GCCACCGTTACGATAGAGCCGGGGCCAAGGCTGGTACCGACCATCGCCTT
GTGTATCGCGGTCATAAAGCCCCAATCATGTCTACTGCATTCCATCCGGC
TCGCGGTCCAGTTGATCTGGGCGATCTCATGCTTAGCTCTAGTCTGGATT
GGAGCGTGAGACTCTGGCGCATCCGTCCGCCGGCAACGACTGCCCCAGCA
ACCTCCGCCATAGCCACAACTCAGGTTGTGGAGCCTATTCTTGACATTAA
TCGTGAGGACGTCGTGTACGATGCACGATGGTCCCCTCACCGCCCCGGTG
TCTTCTCTCTCGTCGACGGTGCTGGAAACCTCGAAGTCTGGGATCTCTAC
ACAGACACCGAAGTCCCCGTCGTGAAGACGACACCGTCCAAGGGCCGTGG
AGGTATATTAACGAGGAGTCTCAACAAGGTAGCCTGGGAAGAGCGCGAGG
GCAGGCGCATTGCAACGGGTGGGCTTGATGGTGTCGTTACTGTCTTTGAA
GTCGGAAAGGGTCTCAGCGGTACTCCAGAAGACGTTCCTGCCGATGAATG
GGCGGGCATGAAGAAACTCGTTGGTAAGTTGGAGCAGCAGGACCGGAACA
ACTGAGTCGTCTCCCCTGCCCCCAGCCGCGCAGATAGTCGAGCTGAGCTC
GATGATCTTATCTCACGTTTAGTTGACCGCCCGGGGTCGGCTTCCATCAG
CCACGGAGCCGATGGCCTGTCACGGAAAGGAAGTAGGCCTAACTCGGTGC
TGAGTGCTAGCCAGCTCAGTGGCGACAACACGGAAGCGTTCAGTCCAACT
ACGCGACCACTCTCACAGTCAATTGCTGTTCAAACGGTCGGAACGGAGCC
GTTTGTCGCGGCTCCTGAGCCGCAGCCCGCCCCTGAGCCCAAACCCGAAG
TTGTCACATACAGTAAAGGAGTCCAGACAGAGGAGTTGAAACCGTCCGGC
ACCACAGAGTCAGATGATGAAGAAAACAATGGCAGCAAAAGAGATAGCGA
ACGCGACGAAGAGATCCGGAGGAAGCTCCGAAAAGAGATCGAGGAGGAGC
TGCAGGCCACTCAGCAGCACGCTGACAATGAAGCCAGCGCCGAGGCCTCA
AATATGCGTTACCCGCTCCGTACATTAGATGATGACGAATTAAAGGCTGT
CACGTCCTCCGAGGACTTTCTGGATTTCGTTGAACGATCAGCTAAAGTCA
TTGAGCGGGCACTGGACGAGGAATACGACGTGCTAGCAGACTACGAGCTT
GGAGGCGTGGATGGTGAACTAGAAGACGACGATGAACATGGACGGAAACG
GCGCGGGATTAGGGAGGTCTGCCAGTTCTGGGACGAGCGATGGAGCAAGA
AGCGAATGATCAGTGATCTAAGCTTTTCGCCAAAGATGTCCTCGGCTATG
CAACAGCGCAAGGTCGAGATCCTTGCCAAGAGAGCCAAACTCGCCGAACT
GAAGCGGCAGAGAGAGCTGCGGCAGAAGGGATTCTCGCAAACCCGAGCTA
ACACCGGCGATGCTTCTGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006203ATCC10864_006203Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006203-T1ATCC10864_006203-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006203-T1.cdsATCC10864_006203-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006203-T1.exon3ATCC10864_006203-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006203-T1.exon2ATCC10864_006203-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006203-T1.exon1ATCC10864_006203-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001680
InterProIPR015943
InterProIPR017986
InterProIPR036322
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:1081927..1084106 -
Powered by Drupal