You are here

Home

ATCC10864_006212-T1, ATCC10864_006212-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006212-T1
Unique NameATCC10864_006212-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:1103074..1104690+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006212-T1 ID=ATCC10864_006212-T1|Name=ATCC10864_006212-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1617bp|location=Sequence derived from alignment at MCQH01000164:1103074..1104690+ (Aspergillus niger ATCC 10864)
ATGGGAAAGTCGGACAACTCTCTTCCTCTCTTGGGGGCAAAGACATCCAT
CGATCCTACCCTAGCTGCCTTGTTTGAGACAAGTGTGCGTACCACACATC
TTATGCTTCGCGAGTATATCTTGGACTAACATGGCCCCATTGGGCATATT
TAGGCTGGCCCAGTAAAGGCTCCATCCGTCACAATCGCCGCTCCCGCTCC
CCAATCAAGCAAGCGCAATGGCGACAATGACGAAGATGAGGATAACGAAG
ATGTGATCTCCGAACCGGAAGACGAATCTCTGCCTGAGGACGAGGAGATG
CAGGAAGCCCCGGAAGCATCGAGCGATGCTGAAGTAGCCGCCGAGGCGCC
CAGCCGCAAACGCAAGAGGACCACTGCAGAAGATGTCGAAGACACATACA
TGCGTCGCATTGCAAAGGAGCAAAAGAAGGAGGATGAAAAGAGACGGGAA
GAGAAGGCGAAGCGACAGAAGACGGTAGACGGTGAGCAGGAAGAGGATGC
CGAGCAATCAGAGGAAGAAGACGATGATGAGGAGAGCTCTGAAGAGGATG
AGGAAAAGAAGGCCGTCCCGAAGCACGAGAGCCAGACTGGTGATGCCGAG
TCGAAGGAACTGGACAAATCCAACCGGACTGTTTTCTTGGGCAATGTCTC
TAGTGAGGCGATCAAGTCCAAGTCCGCTAAAAAGACCCTCCTCAAACACC
TGGCATCTTTCCTCTCTACGCTTCCGGAGTCTACTGGACCTCACAAGGTG
GAATCTATTCGCTTCCGCTCCACAGCATTTGCCAGTGGTGGCGGAGTCCC
CAAGCGAGCCTCATTTGCCAAGCAAGAAGTTCTGGATGATACGACGCCGT
GCACCAACGCATATGCCGTATACAGCACTGTGCAAGCTGCGCGCAAGGCG
CCCGCTGCGCTTAACGGTACCGTGGTTCTGGACCGGCATTTGCGTGTTGA
CAGTGTCGCGCATCCTTCCCCAATCGACCATAAACGGTGTGTCTTCGTTG
GTAACCTGGACTTTGTCGACAACGAGGTCAAGCCCGACGATGAGCAGAAG
AAGAAGAAGCGAGCCCCCGCAGATGTTGAAGAAGGTCTTTGGCGGACCTT
CAACGCTCACACCGGTCGTTCGAATAAGGAAAAACCCAAGAATGGCAATG
TTGAATCAGTCCGCGTGGTTCGCGACAGCCTTACTCGGGTCGGCAAAGGA
TTTGCCTACGTTCAATTCTATGATCAAAACTGTGTAGAGGAGGCTCTTGT
ACTCAATGGAAAGCATTATCCGCCTATGCTCCCCCGCAAACTCCGCGTGT
CGCGTGCCAAGAAGGTTTTGAAGAAGCGTGCAGACGGTGGCAGCCAGAAG
AAGACGCTTGGTGTGGCAGATAAGACCCTGCAGGGTCGCGCTGGAAGACT
ATTTGGTCGGGCCGGTGCGGCCAAGGTGAAGGCCGATGCGCAGAAGTCCA
TCTCGCAGAACTCGACGGTGTTCGAAGGCCATCGGGCCACCGAAGGTTCG
CACATTCGGGTCAAGACGAAGAGCCGTGGCTCCAAGGGCAAGCCGAACAA
CCGGAGCAGCAAGCGTGCTGCGGCCTACAAAGCCGCTGGTGGGTGGAAGA
AGGGGAAGACGGATTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000164:1103074..1104690+

>ATCC10864_006212-T1 ID=ATCC10864_006212-T1|Name=ATCC10864_006212-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3096bp|location=Sequence derived from alignment at MCQH01000164:1103074..1104690+ (Aspergillus niger ATCC 10864)
ATGGGAAAGTCGGACAACTCTCTTCCTCTCTTGGGGGCAAAGACATCCAT
CGATCCTACCCTAGCTGCCTTGTTTGAGACAAGTGCTGGCCCAGTAAAGG
CTCCATCCGTCACAATCGCCGCTCCCGCTCCCCAATCAAGCAAGCGCAAT
GGCGACAATGACGAAGATGAGGATAACGAAGATGTGATCTCCGAACCGGA
AGACGAATCTCTGCCTGAGGACGAGGAGATGCAGGAAGCCCCGGAAGCAT
CGAGCGATGCTGAAGTAGCCGCCGAGGCGCCCAGCCGCAAACGCAAGAGG
ACCACTGCAGAAGATGTCGAAGACACATACATGCGTCGCATTGCAAAGGA
GCAAAAGAAGGAGGATGAAAAGAGACGGGAAGAGAAGGCGAAGCGACAGA
AGACGGTAGACGGTGAGCAGGAAGAGGATGCCGAGCAATCAGAGGAAGAA
GACGATGATGAGGAGAGCTCTGAAGAGGATGAGGAAAAGAAGGCCGTCCC
GAAGCACGAGAGCCAGACTGGTGATGCCGAGTCGAAGGAACTGGACAAAT
CCAACCGGACTGTTTTCTTGGGCAATGTCTCTAGTGAGGCGATCAAGTCC
AAGTCCGCTAAAAAGACCCTCCTCAAACACCTGGCATCTTTCCTCTCTAC
GCTTCCGGAGTCTACTGGACCTCACAAGGTGGAATCTATTCGCTTCCGCT
CCACAGCATTTGCCAGTGGTGGCGGAGTCCCCAAGCGAGCCTCATTTGCC
AAGCAAGAAGTTCTGGATGATACGACGCCGTGCACCAACGCATATGCCGT
ATACAGCACTGTGCAAGCTGCGCGCAAGGCGCCCGCTGCGCTTAACGGTA
CCGTGGTTCTGGACCGGCATTTGCGTGTTGACAGTGTCGCGCATCCTTCC
CCAATCGACCATAAACGGTGTGTCTTCGTTGGTAACCTGGACTTTGTCGA
CAACGAGGTCAAGCCCGACGATGAGCAGAAGAAGAAGAAGCGAGCCCCCG
CAGATGTTGAAGAAGGTCTTTGGCGGACCTTCAACGCTCACACCGGTCGT
TCGAATAAGGAAAAACCCAAGAATGGCAATGTTGAATCAGTCCGCGTGGT
TCGCGACAGCCTTACTCGGGTCGGCAAAGGATTTGCCTACGTTCAATTCT
ATGATCAAAACTGTGTAGAGGAGGCTCTTGTACTCAATGGAAAGCATTAT
CCGCCTATGCTCCCCCGCAAACTCCGCGTGTCGCGTGCCAAGAAGGTTTT
GAAGAAGCGTGCAGACGGTGGCAGCCAGAAGAAGACGCTTGGTGTGGCAG
ATAAGACCCTGCAGGGTCGCGCTGGAAGACTATTTGGTCGGGCCGGTGCG
GCCAAGGTGAAGGCCGATGCGCAGAAGTCCATCTCGCAGAACTCGACGGT
GTTCGAAGGCCATCGGGCCACCGAAGGTTCGCACATTCGGGTCAAGACGA
AGAGCCGTGGCTCCAAGGGCAAGCCGAACAACCGGAGCAGCAAGCGTGCT
GCGGCCTACAAAGCCGCTGGTGGGTGGAAGAAGGGGAAGACGGATTAAAT
GGGAAAGTCGGACAACTCTCTTCCTCTCTTGGGGGCAAAGACATCCATCG
ATCCTACCCTAGCTGCCTTGTTTGAGACAAGTGCTGGCCCAGTAAAGGCT
CCATCCGTCACAATCGCCGCTCCCGCTCCCCAATCAAGCAAGCGCAATGG
CGACAATGACGAAGATGAGGATAACGAAGATGTGATCTCCGAACCGGAAG
ACGAATCTCTGCCTGAGGACGAGGAGATGCAGGAAGCCCCGGAAGCATCG
AGCGATGCTGAAGTAGCCGCCGAGGCGCCCAGCCGCAAACGCAAGAGGAC
CACTGCAGAAGATGTCGAAGACACATACATGCGTCGCATTGCAAAGGAGC
AAAAGAAGGAGGATGAAAAGAGACGGGAAGAGAAGGCGAAGCGACAGAAG
ACGGTAGACGGTGAGCAGGAAGAGGATGCCGAGCAATCAGAGGAAGAAGA
CGATGATGAGGAGAGCTCTGAAGAGGATGAGGAAAAGAAGGCCGTCCCGA
AGCACGAGAGCCAGACTGGTGATGCCGAGTCGAAGGAACTGGACAAATCC
AACCGGACTGTTTTCTTGGGCAATGTCTCTAGTGAGGCGATCAAGTCCAA
GTCCGCTAAAAAGACCCTCCTCAAACACCTGGCATCTTTCCTCTCTACGC
TTCCGGAGTCTACTGGACCTCACAAGGTGGAATCTATTCGCTTCCGCTCC
ACAGCATTTGCCAGTGGTGGCGGAGTCCCCAAGCGAGCCTCATTTGCCAA
GCAAGAAGTTCTGGATGATACGACGCCGTGCACCAACGCATATGCCGTAT
ACAGCACTGTGCAAGCTGCGCGCAAGGCGCCCGCTGCGCTTAACGGTACC
GTGGTTCTGGACCGGCATTTGCGTGTTGACAGTGTCGCGCATCCTTCCCC
AATCGACCATAAACGGTGTGTCTTCGTTGGTAACCTGGACTTTGTCGACA
ACGAGGTCAAGCCCGACGATGAGCAGAAGAAGAAGAAGCGAGCCCCCGCA
GATGTTGAAGAAGGTCTTTGGCGGACCTTCAACGCTCACACCGGTCGTTC
GAATAAGGAAAAACCCAAGAATGGCAATGTTGAATCAGTCCGCGTGGTTC
GCGACAGCCTTACTCGGGTCGGCAAAGGATTTGCCTACGTTCAATTCTAT
GATCAAAACTGTGTAGAGGAGGCTCTTGTACTCAATGGAAAGCATTATCC
GCCTATGCTCCCCCGCAAACTCCGCGTGTCGCGTGCCAAGAAGGTTTTGA
AGAAGCGTGCAGACGGTGGCAGCCAGAAGAAGACGCTTGGTGTGGCAGAT
AAGACCCTGCAGGGTCGCGCTGGAAGACTATTTGGTCGGGCCGGTGCGGC
CAAGGTGAAGGCCGATGCGCAGAAGTCCATCTCGCAGAACTCGACGGTGT
TCGAAGGCCATCGGGCCACCGAAGGTTCGCACATTCGGGTCAAGACGAAG
AGCCGTGGCTCCAAGGGCAAGCCGAACAACCGGAGCAGCAAGCGTGCTGC
GGCCTACAAAGCCGCTGGTGGGTGGAAGAAGGGGAAGACGGATTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP12ATCC10864_006212Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006212-T1.exon1ATCC10864_006212-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006212-T1.exon2ATCC10864_006212-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006212-T1.cdsATCC10864_006212-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006212-T1ATCC10864_006212-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR034777
InterProIPR012677
PFAMPF00076
InterProIPR000504
InterProIPR035979
Properties
Property NameValue
NoteBUSCO:EOG09264IQ7
ProductNucleolar protein 12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:1103074..1104690 +
Powered by Drupal