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ATCC10864_006218-T1, ATCC10864_006218-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006218-T1
Unique NameATCC10864_006218-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:1118409..1119148-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006218-T1 ID=ATCC10864_006218-T1|Name=ATCC10864_006218-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=740bp|location=Sequence derived from alignment at MCQH01000164:1118409..1119148- (Aspergillus niger ATCC 10864)
ATGCGTTCCGTCTTCTACCTTGCTCTCAGCGCCATTGCGTCTCTCGCGGC TGCTTCCGATAACCCGTTCAACAACCCCGAGGGTGGCTACACCTTCACCG CGGGCAGCCCGACTACTCTCACCTGGGACCCAACTACTAATGGCACGGTC ACCCTGAGACTCCAGTGGGGTGCTGTTTTCACCACCACCTCGGGCGAACT CATTGCCGGTAAGCTCCTGTCATGGATGTGGTGTGAAAAGCTTCGATGAG ATGCTAACGAGAAGAATCAGGGAACATCGACAACTCTGGTAGCTACTCTT GGACTCCTTCTGCCAAGCTTGCAGCCCGCTCGGACTACACCATTGAGATC ATCGATGATGATGACACGGACGATGTCAACTACACCCCGCGCTTCTCAAT CTCTGGTGCTACTGGAGCGGTGACCACCAGCACTGCCTCGTCAACCACGT CTTCCGCTTCTAGCACCAGTTCTTCCACCGAACAGACCTCCACCGTGAGC GCCACTACTCTGTCTACTACCACCTCGAGCGCTAGCTCTTCCACCTCGAC CACCACGGCTAGCTCGAACTCCACCGTTTCGGCGTCGTCCTCCAAGACTG CCTCGTCCAGCTCTTCGAACACCGCGAGCTCCAGCGCTTCTACCGCCAGC GTTACCACCGTCTCCACCAATGCCGGTATGGCCAACCAGGCCTCTATTGG CATGATGGCCCTTATCTTTGGTGCTGTTGCGCTCATCTAA
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Coding sequence (CDS) from alignment at MCQH01000164:1118409..1119148-

>ATCC10864_006218-T1 ID=ATCC10864_006218-T1|Name=ATCC10864_006218-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1356bp|location=Sequence derived from alignment at MCQH01000164:1118409..1119148- (Aspergillus niger ATCC 10864)
GGAACATCGACAACTCTGGTAGCTACTCTTGGACTCCTTCTGCCAAGCTT
GCAGCCCGCTCGGACTACACCATTGAGATCATCGATGATGATGACACGGA
CGATGTCAACTACACCCCGCGCTTCTCAATCTCTGGTGCTACTGGAGCGG
TGACCACCAGCACTGCCTCGTCAACCACGTCTTCCGCTTCTAGCACCAGT
TCTTCCACCGAACAGACCTCCACCGTGAGCGCCACTACTCTGTCTACTAC
CACCTCGAGCGCTAGCTCTTCCACCTCGACCACCACGGCTAGCTCGAACT
CCACCGTTTCGGCGTCGTCCTCCAAGACTGCCTCGTCCAGCTCTTCGAAC
ACCGCGAGCTCCAGCGCTTCTACCGCCAGCGTTACCACCGTCTCCACCAA
TGCCGGTATGGCCAACCAGGCCTCTATTGGCATGATGGCCCTTATCTTTG
GTGCTGTTGCGCTCATCTAAATGCGTTCCGTCTTCTACCTTGCTCTCAGC
GCCATTGCGTCTCTCGCGGCTGCTTCCGATAACCCGTTCAACAACCCCGA
GGGTGGCTACACCTTCACCGCGGGCAGCCCGACTACTCTCACCTGGGACC
CAACTACTAATGGCACGGTCACCCTGAGACTCCAGTGGGGTGCTGTTTTC
ACCACCACCTCGGGCGAACTCATTGCCGGGAACATCGACAACTCTGGTAG
CTACTCTTGGACTCCTTCTGCCAAGCTTGCAGCCCGCTCGGACTACACCA
TTGAGATCATCGATGATGATGACACGGACGATGTCAACTACACCCCGCGC
TTCTCAATCTCTGGTGCTACTGGAGCGGTGACCACCAGCACTGCCTCGTC
AACCACGTCTTCCGCTTCTAGCACCAGTTCTTCCACCGAACAGACCTCCA
CCGTGAGCGCCACTACTCTGTCTACTACCACCTCGAGCGCTAGCTCTTCC
ACCTCGACCACCACGGCTAGCTCGAACTCCACCGTTTCGGCGTCGTCCTC
CAAGACTGCCTCGTCCAGCTCTTCGAACACCGCGAGCTCCAGCGCTTCTA
CCGCCAGCGTTACCACCGTCTCCACCAATGCCGGTATGGCCAACCAGGCC
TCTATTGGCATGATGGCCCTTATCTTTGGTGCTGTTGCGCTCATCTAAAT
GCGTTCCGTCTTCTACCTTGCTCTCAGCGCCATTGCGTCTCTCGCGGCTG
CTTCCGATAACCCGTTCAACAACCCCGAGGGTGGCTACACCTTCACCGCG
GGCAGCCCGACTACTCTCACCTGGGACCCAACTACTAATGGCACGGTCAC
CCTGAGACTCCAGTGGGGTGCTGTTTTCACCACCACCTCGGGCGAACTCA
TTGCCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006218ATCC10864_006218Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006218-T1ATCC10864_006218-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006218-T1.cdsATCC10864_006218-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006218-T1.exon2ATCC10864_006218-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006218-T1.exon1ATCC10864_006218-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF10342
InterProIPR018466
Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:1118409..1119148 -