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ATCC10864_006233-T1, ATCC10864_006233-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006233-T1
Unique NameATCC10864_006233-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:1167462..1170284+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006233-T1 ID=ATCC10864_006233-T1|Name=ATCC10864_006233-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2823bp|location=Sequence derived from alignment at MCQH01000164:1167462..1170284+ (Aspergillus niger ATCC 10864)
ATGCCGCCTTCGCAGCTTAAACAGCTCAAGGCTTCCCTCCGCGAGGGTGG
AGTCTTGGGGCCCCAGCAGTCCAAGAAGCAAAAGCGTCAGAATGCGAAGA
CTGGTGTGTCCGCGCAAAATCGCATGAAGCGGGAATCCGCTCTGCAGGCG
ATTCGCGATCGTTTCAACCCGTTCGAGATCAAGGCCACTTCGCGCCCCAA
GTTCGATGTGACCACGCGCGATGTCGGACCTAAGTCGAAACATGGCCATG
CGAGGCCCGGTGTGACCAAGTCTCTTGGTGAAGAAAAGGTGAGCTAGGTT
GGACATTCTTCGACACGGGGTGTCACTGACAAGGTACTTCCTCTACAGAG
ACGCCATACGCTTTTGCGCGAAATGGACCGCAAGAACAAAGTTGGTGGAA
TCCTCGATCGCCGGTTCGGTGAGGATGATCCGACAATGACGCCGGAAGAA
AGGGCTGCCGAGCGATTCGCCCGTGAGAGTCAGAAGAAACTGCGCAAGGA
GTCGATGTTCAACTTGGAGGACGACGAGGAAGAGTTCCAGCTCACACATC
AAGGCCAGTCTCTGTCATTTGGAGAGGGAATGCTCGGAGATGACTTCCGC
GAAGGCGATTTGGACATGGACGAAGAATCGGATTCGGAACTGCCTCGCAA
GAGGAAGCGAGAGTTTGCCGACGATGAGGAGGCTCTAGATGACGATATCG
TATTTGACGATGAGGAAGGGGAAGAGCAGCCAGAGCGCAAGAAGTCGAAG
CACGAAGTCATGAAAGAAGTCATCGCCAAGTCCAAGTTCTACAAAGCCGA
ACGACAGAAAGCTAAGGAAGACGATGACGATCTTCGAGAGGAGCTCGACA
AAGGTCTTCCCGATCTCTTCGACATGTTGAGAGGCGTGAAGCCTCCCCCG
AAACCGGAGCCTCCAAAGGACGATTTCGCCTCAATGGACCCCGCTCGTGC
AGCACTGCTGGCCGGAAAGTCACAGAACGAGACCGAGCAGGAGTATGACC
AACGCTTGAAGCAGTTGACCTTCGATAAGAGGTCTCAACCGACGGACCGT
ACGAAGACGGCAGAGGAGAAGGCGGCGGAAGAGGCCGAGCGGCTGAAGAA
GCTGGAAGAAGAGCGTGTTCGACGAATGCGCGGTGAGGAGCCAAGCGAGG
ACGAAGAGGAGGAGGATGAAGAGGAAAGTGACGAGGAAGGCAGTGAGGAC
GACGACGAGGAGTCGTTACCGGACGATGCCAAAGCGTTCGGTTTGCAGCA
GCCCACGGCCGAGACGAGCACTCGTCCCGAACTGGGTGTCGAAGATGAGG
ACGATTTCATTATCGACGATGACCTTGTGGAAACGAGGTCTAATGCCAGT
CTCTCCTTCGATGAAAGCGACCTGGAGATGGAATCCGCGGAGGAGTCCGA
CGAGGAGCCTGAAGACGACCAGGAGGACGAGTTGATCAATGGCTTCACGC
TCCCTGAGAGCAAGTCTGGCGATACCTCGACAGCTCCCAACAGCACCGAA
GAGCCAACTGACGGTCTGGCATACACATACCCCTGCCCTGGCAGCCATGA
CGAGTTCCTGGAGATCATCAAGGACGTGTCTATGCAGGACCTCCCCGTCG
TCGTCCAGAGGATTCGTGCCCTGCACCATCCCCGTCTTCACCCCGACAAC
AAGATGAAGCTCGGCCGTTTCGCGGGCATCCTCGTCGAGCACGTTGCATA
CATGGCCGATCTACCGGAACATCCTCCCTTTGCCATTGTGGAAAACATCC
TCCGTCACATCCACTCCCTGGCGAAGACTCACCCCGACACCGTCTGCCAG
GCATATCGCGCCCATCTCCGCCAGATTGCCACGGAGCGTCCGCTCAATCT
CCGTGCTGGTGACCTCGTCATCCTCACCGGCATTGCCACCACCTTCCCAA
CCTCCGACCACTTCCACGCTATCGCAACCCCGGCACACCTCTGCATCTCG
CGCTACCTGGGCCAGGGCGTCGTCAACTCCCTCGCCGACGCGTCCGCCGG
CACTTACGCAGCCAGCTTACTCCTGCAATACCAGTTCATCTCCAAGCGCT
ACATGCCGGAATTCATCAACTACACCCTCAACATGCTGTGCCACCTCAGC
CCGAAAGAGCCCAGCGAGAGTCTCGGGTCCTTCCCCCTCCGGAGCCCGCA
AACCTCTCTGCGTCTGAACCTCTCTTCTTCCAAGACTACCATCTCCCCCC
GCAAGCTTCGCTTCTGGGACACGACCGACCAAACCCACTCCAACCCCGAA
GAGCTCAAACTATCCCTGCTCACCACCCTCGTCACCCTCCTCGGCACCGC
CTCCGACCTCTGGACCAGCAAATCCGCCTACACCGAAATCTTCACTCCAG
TCCAGAACGTCCTTAACCACCTCCGCAGCAGCCTCAAGGGCAACAAGAAA
CTCATCTCCTCTCAAGTGCGGGACACCATTCAATCCACCCTGGACAAGGT
TACCACCCAACTCTCTCAAGCCAAACTCACCCGTCGACCCCTCCTCCTGC
ACAACCACCGGCCCTTGGCCATCAAAACCGCCATCCCCAAGTTCGAAGAG
ACCTTCAACCCGGACAAGCACTACGACCCGGACCGCGAGCGCGCCGAAAG
CAACCGTCTCAAGGCGGAATACAAGCGCGAGCGCAAGGGAGCGATGCGCG
AGCTCCGCAAGGACGCCAACTTCATTGCGCGCGAGAAGCTCCGCGAGAAG
AAGGAGCGCGATGCCGAGTACGAGCGCAAGTACAAGCGGCTTGTGGCGGA
GGTGCAGAACGAGGAGGGTCGCGAGGCGAATGCTTACGAAAGGGAGAAGA
GAATGCGGCAGGGCAAGCGGTGA
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Coding sequence (CDS) from alignment at MCQH01000164:1167462..1170284+

>ATCC10864_006233-T1 ID=ATCC10864_006233-T1|Name=ATCC10864_006233-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5526bp|location=Sequence derived from alignment at MCQH01000164:1167462..1170284+ (Aspergillus niger ATCC 10864)
ATGCCGCCTTCGCAGCTTAAACAGCTCAAGGCTTCCCTCCGCGAGGGTGG
AGTCTTGGGGCCCCAGCAGTCCAAGAAGCAAAAGCGTCAGAATGCGAAGA
CTGGTGTGTCCGCGCAAAATCGCATGAAGCGGGAATCCGCTCTGCAGGCG
ATTCGCGATCGTTTCAACCCGTTCGAGATCAAGGCCACTTCGCGCCCCAA
GTTCGATGTGACCACGCGCGATGTCGGACCTAAGTCGAAACATGGCCATG
CGAGGCCCGGTGTGACCAAGTCTCTTGGTGAAGAAAAGAGACGCCATACG
CTTTTGCGCGAAATGGACCGCAAGAACAAAGTTGGTGGAATCCTCGATCG
CCGGTTCGGTGAGGATGATCCGACAATGACGCCGGAAGAAAGGGCTGCCG
AGCGATTCGCCCGTGAGAGTCAGAAGAAACTGCGCAAGGAGTCGATGTTC
AACTTGGAGGACGACGAGGAAGAGTTCCAGCTCACACATCAAGGCCAGTC
TCTGTCATTTGGAGAGGGAATGCTCGGAGATGACTTCCGCGAAGGCGATT
TGGACATGGACGAAGAATCGGATTCGGAACTGCCTCGCAAGAGGAAGCGA
GAGTTTGCCGACGATGAGGAGGCTCTAGATGACGATATCGTATTTGACGA
TGAGGAAGGGGAAGAGCAGCCAGAGCGCAAGAAGTCGAAGCACGAAGTCA
TGAAAGAAGTCATCGCCAAGTCCAAGTTCTACAAAGCCGAACGACAGAAA
GCTAAGGAAGACGATGACGATCTTCGAGAGGAGCTCGACAAAGGTCTTCC
CGATCTCTTCGACATGTTGAGAGGCGTGAAGCCTCCCCCGAAACCGGAGC
CTCCAAAGGACGATTTCGCCTCAATGGACCCCGCTCGTGCAGCACTGCTG
GCCGGAAAGTCACAGAACGAGACCGAGCAGGAGTATGACCAACGCTTGAA
GCAGTTGACCTTCGATAAGAGGTCTCAACCGACGGACCGTACGAAGACGG
CAGAGGAGAAGGCGGCGGAAGAGGCCGAGCGGCTGAAGAAGCTGGAAGAA
GAGCGTGTTCGACGAATGCGCGGTGAGGAGCCAAGCGAGGACGAAGAGGA
GGAGGATGAAGAGGAAAGTGACGAGGAAGGCAGTGAGGACGACGACGAGG
AGTCGTTACCGGACGATGCCAAAGCGTTCGGTTTGCAGCAGCCCACGGCC
GAGACGAGCACTCGTCCCGAACTGGGTGTCGAAGATGAGGACGATTTCAT
TATCGACGATGACCTTGTGGAAACGAGGTCTAATGCCAGTCTCTCCTTCG
ATGAAAGCGACCTGGAGATGGAATCCGCGGAGGAGTCCGACGAGGAGCCT
GAAGACGACCAGGAGGACGAGTTGATCAATGGCTTCACGCTCCCTGAGAG
CAAGTCTGGCGATACCTCGACAGCTCCCAACAGCACCGAAGAGCCAACTG
ACGGTCTGGCATACACATACCCCTGCCCTGGCAGCCATGACGAGTTCCTG
GAGATCATCAAGGACGTGTCTATGCAGGACCTCCCCGTCGTCGTCCAGAG
GATTCGTGCCCTGCACCATCCCCGTCTTCACCCCGACAACAAGATGAAGC
TCGGCCGTTTCGCGGGCATCCTCGTCGAGCACGTTGCATACATGGCCGAT
CTACCGGAACATCCTCCCTTTGCCATTGTGGAAAACATCCTCCGTCACAT
CCACTCCCTGGCGAAGACTCACCCCGACACCGTCTGCCAGGCATATCGCG
CCCATCTCCGCCAGATTGCCACGGAGCGTCCGCTCAATCTCCGTGCTGGT
GACCTCGTCATCCTCACCGGCATTGCCACCACCTTCCCAACCTCCGACCA
CTTCCACGCTATCGCAACCCCGGCACACCTCTGCATCTCGCGCTACCTGG
GCCAGGGCGTCGTCAACTCCCTCGCCGACGCGTCCGCCGGCACTTACGCA
GCCAGCTTACTCCTGCAATACCAGTTCATCTCCAAGCGCTACATGCCGGA
ATTCATCAACTACACCCTCAACATGCTGTGCCACCTCAGCCCGAAAGAGC
CCAGCGAGAGTCTCGGGTCCTTCCCCCTCCGGAGCCCGCAAACCTCTCTG
CGTCTGAACCTCTCTTCTTCCAAGACTACCATCTCCCCCCGCAAGCTTCG
CTTCTGGGACACGACCGACCAAACCCACTCCAACCCCGAAGAGCTCAAAC
TATCCCTGCTCACCACCCTCGTCACCCTCCTCGGCACCGCCTCCGACCTC
TGGACCAGCAAATCCGCCTACACCGAAATCTTCACTCCAGTCCAGAACGT
CCTTAACCACCTCCGCAGCAGCCTCAAGGGCAACAAGAAACTCATCTCCT
CTCAAGTGCGGGACACCATTCAATCCACCCTGGACAAGGTTACCACCCAA
CTCTCTCAAGCCAAACTCACCCGTCGACCCCTCCTCCTGCACAACCACCG
GCCCTTGGCCATCAAAACCGCCATCCCCAAGTTCGAAGAGACCTTCAACC
CGGACAAGCACTACGACCCGGACCGCGAGCGCGCCGAAAGCAACCGTCTC
AAGGCGGAATACAAGCGCGAGCGCAAGGGAGCGATGCGCGAGCTCCGCAA
GGACGCCAACTTCATTGCGCGCGAGAAGCTCCGCGAGAAGAAGGAGCGCG
ATGCCGAGTACGAGCGCAAGTACAAGCGGCTTGTGGCGGAGGTGCAGAAC
GAGGAGGGTCGCGAGGCGAATGCTTACGAAAGGGAGAAGAGAATGCGGCA
GGGCAAGCGGTGAATGCCGCCTTCGCAGCTTAAACAGCTCAAGGCTTCCC
TCCGCGAGGGTGGAGTCTTGGGGCCCCAGCAGTCCAAGAAGCAAAAGCGT
CAGAATGCGAAGACTGGTGTGTCCGCGCAAAATCGCATGAAGCGGGAATC
CGCTCTGCAGGCGATTCGCGATCGTTTCAACCCGTTCGAGATCAAGGCCA
CTTCGCGCCCCAAGTTCGATGTGACCACGCGCGATGTCGGACCTAAGTCG
AAACATGGCCATGCGAGGCCCGGTGTGACCAAGTCTCTTGGTGAAGAAAA
GAGACGCCATACGCTTTTGCGCGAAATGGACCGCAAGAACAAAGTTGGTG
GAATCCTCGATCGCCGGTTCGGTGAGGATGATCCGACAATGACGCCGGAA
GAAAGGGCTGCCGAGCGATTCGCCCGTGAGAGTCAGAAGAAACTGCGCAA
GGAGTCGATGTTCAACTTGGAGGACGACGAGGAAGAGTTCCAGCTCACAC
ATCAAGGCCAGTCTCTGTCATTTGGAGAGGGAATGCTCGGAGATGACTTC
CGCGAAGGCGATTTGGACATGGACGAAGAATCGGATTCGGAACTGCCTCG
CAAGAGGAAGCGAGAGTTTGCCGACGATGAGGAGGCTCTAGATGACGATA
TCGTATTTGACGATGAGGAAGGGGAAGAGCAGCCAGAGCGCAAGAAGTCG
AAGCACGAAGTCATGAAAGAAGTCATCGCCAAGTCCAAGTTCTACAAAGC
CGAACGACAGAAAGCTAAGGAAGACGATGACGATCTTCGAGAGGAGCTCG
ACAAAGGTCTTCCCGATCTCTTCGACATGTTGAGAGGCGTGAAGCCTCCC
CCGAAACCGGAGCCTCCAAAGGACGATTTCGCCTCAATGGACCCCGCTCG
TGCAGCACTGCTGGCCGGAAAGTCACAGAACGAGACCGAGCAGGAGTATG
ACCAACGCTTGAAGCAGTTGACCTTCGATAAGAGGTCTCAACCGACGGAC
CGTACGAAGACGGCAGAGGAGAAGGCGGCGGAAGAGGCCGAGCGGCTGAA
GAAGCTGGAAGAAGAGCGTGTTCGACGAATGCGCGGTGAGGAGCCAAGCG
AGGACGAAGAGGAGGAGGATGAAGAGGAAAGTGACGAGGAAGGCAGTGAG
GACGACGACGAGGAGTCGTTACCGGACGATGCCAAAGCGTTCGGTTTGCA
GCAGCCCACGGCCGAGACGAGCACTCGTCCCGAACTGGGTGTCGAAGATG
AGGACGATTTCATTATCGACGATGACCTTGTGGAAACGAGGTCTAATGCC
AGTCTCTCCTTCGATGAAAGCGACCTGGAGATGGAATCCGCGGAGGAGTC
CGACGAGGAGCCTGAAGACGACCAGGAGGACGAGTTGATCAATGGCTTCA
CGCTCCCTGAGAGCAAGTCTGGCGATACCTCGACAGCTCCCAACAGCACC
GAAGAGCCAACTGACGGTCTGGCATACACATACCCCTGCCCTGGCAGCCA
TGACGAGTTCCTGGAGATCATCAAGGACGTGTCTATGCAGGACCTCCCCG
TCGTCGTCCAGAGGATTCGTGCCCTGCACCATCCCCGTCTTCACCCCGAC
AACAAGATGAAGCTCGGCCGTTTCGCGGGCATCCTCGTCGAGCACGTTGC
ATACATGGCCGATCTACCGGAACATCCTCCCTTTGCCATTGTGGAAAACA
TCCTCCGTCACATCCACTCCCTGGCGAAGACTCACCCCGACACCGTCTGC
CAGGCATATCGCGCCCATCTCCGCCAGATTGCCACGGAGCGTCCGCTCAA
TCTCCGTGCTGGTGACCTCGTCATCCTCACCGGCATTGCCACCACCTTCC
CAACCTCCGACCACTTCCACGCTATCGCAACCCCGGCACACCTCTGCATC
TCGCGCTACCTGGGCCAGGGCGTCGTCAACTCCCTCGCCGACGCGTCCGC
CGGCACTTACGCAGCCAGCTTACTCCTGCAATACCAGTTCATCTCCAAGC
GCTACATGCCGGAATTCATCAACTACACCCTCAACATGCTGTGCCACCTC
AGCCCGAAAGAGCCCAGCGAGAGTCTCGGGTCCTTCCCCCTCCGGAGCCC
GCAAACCTCTCTGCGTCTGAACCTCTCTTCTTCCAAGACTACCATCTCCC
CCCGCAAGCTTCGCTTCTGGGACACGACCGACCAAACCCACTCCAACCCC
GAAGAGCTCAAACTATCCCTGCTCACCACCCTCGTCACCCTCCTCGGCAC
CGCCTCCGACCTCTGGACCAGCAAATCCGCCTACACCGAAATCTTCACTC
CAGTCCAGAACGTCCTTAACCACCTCCGCAGCAGCCTCAAGGGCAACAAG
AAACTCATCTCCTCTCAAGTGCGGGACACCATTCAATCCACCCTGGACAA
GGTTACCACCCAACTCTCTCAAGCCAAACTCACCCGTCGACCCCTCCTCC
TGCACAACCACCGGCCCTTGGCCATCAAAACCGCCATCCCCAAGTTCGAA
GAGACCTTCAACCCGGACAAGCACTACGACCCGGACCGCGAGCGCGCCGA
AAGCAACCGTCTCAAGGCGGAATACAAGCGCGAGCGCAAGGGAGCGATGC
GCGAGCTCCGCAAGGACGCCAACTTCATTGCGCGCGAGAAGCTCCGCGAG
AAGAAGGAGCGCGATGCCGAGTACGAGCGCAAGTACAAGCGGCTTGTGGC
GGAGGTGCAGAACGAGGAGGGTCGCGAGGCGAATGCTTACGAAAGGGAGA
AGAGAATGCGGCAGGGCAAGCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006233ATCC10864_006233Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006233-T1.exon1ATCC10864_006233-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006233-T1.exon2ATCC10864_006233-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006233-T1.cdsATCC10864_006233-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006233-T1ATCC10864_006233-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF04147
InterProIPR007276
Properties
Property NameValue
NoteBUSCO:EOG092620IA
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:1167462..1170284 +
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