You are here

Home

ATCC10864_006244-T1, ATCC10864_006244-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006244-T1
Unique NameATCC10864_006244-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:1206311..1208041-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006244-T1 ID=ATCC10864_006244-T1|Name=ATCC10864_006244-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1731bp|location=Sequence derived from alignment at MCQH01000164:1206311..1208041- (Aspergillus niger ATCC 10864)
ATGGCTACCACTACAACGGGACAGGAAGACCTCCATCATGAGAAGGAAGT
CCCCGCGGTCACTTCAGATCCAGAAGCCGGTCATGAACCCCAGCTCACCG
GTAAAACGTGGATGTACAAACCGATCAAGATCGGTCCCTGGTCGTTGCCG
TACTTTGCCTCCCCAGAATCCCAGCTTCTGCTGGTCTCCTTCGTGTGCTT
CCTCTGTCCGGGCATGTTCAATGCGGTCAGCGGTTTGGGCGGGGGTGGTC
AGCTGGACCCTACCGATGTCAGCGACTCCAACACCGCTCTGTACAGCACC
TTTGCAGTAGTTGGTTTCTTCGCCGGGTCCATCGCAAACCGCATTGGTCT
CCGTCTGACTCTCTCTATTGGTGGCTTTGGCTACTTCCTCTATGTGGCTT
CCCTTTTGTCGTACAACCATAACAAGAACTCCGGCTTCCTGATCTTTGCG
GGCGCGCTATTAGGTGTCTGCGGTGGTCTGCTGTGGTGTGCGCAGGGTGC
AGTCATGATGAGCTACCCGAATGAAAAGGAGAAGGGTAAATTCATCGCTA
TTTTCTGGGTGATCTTCAACCTGGGTGGCGTGATTGGAAGCTTGGTGAGT
CCTTTGGTGGTTCGATCAATCTGGTAGTACTTCTCTGACCCTGATATACA
GGTACCTTTGGGTCAAAACCTGCACTCTGAAGCTGGTCAGGTGAATGATG
GCACCTACATCGCTTTCATGGTGCTCATGGCGCTTGGCTTTGTCCTTGCC
TGGGCCCTCTCAGACTCGAAGTATGTCAAGCGCAAGGATGGCTCGCATGT
CATTGTGATGAAGAACCCCACGTGGAAATCCGAATTCAAAGGTCTCTACG
ACACCATTCGCACCGACTATTACATCATCCTCTTCTTTCCCATGTTCTTG
GTGAGCAACTGGTTTACTGCATATCAATTCAACAGTGTCAATGGTGCTTA
TTTCACCATCCGGACGCGGGCCCTCAACAATCTCCTCTACTGGCTTATGC
AGATGGTTGGCGCTTTCGTGTTCGGCCAGATCCTCGATTTGAAGTACCTT
ACCCGCCCAGTCCGAGCCAAGCTTGGTCTTGGACTCCTCTTTGCCCTCAC
CATGGGCGTTTGGGGCGGTGGTTATGCCTTCCAGAAGACATACACCCGGA
AGACCGTCGAGGCAGATACCGACTGGACGACCAGCGGCTATGTTGGGCCC
ATGTTCTTGTACATGTTTTATGGGTTCTATGACGCTGCCTTCCAGACTTG
TGCATATTGGTTCGTAATGCCATTACCTCCCTTTTCTAACGGCTGCTCTT
ATTGTATGCATTTTACTGACGGATACGGGTTGTGTAGGTTCATGGGTTCA
CTGACTAATAACGCTCGAAAATTGGCCAACTTCGCCGGTTTCTACAAAGG
CATCCAGTCTGCTGGTGCAGCTGGCATGTGGCGGTGAGTCTTAGAGAAAA
CCCCTCGCTCGCGAAGTGAGGTGTAGAAGCTAATGAATATGCTTTGCTGC
AGCATGGACGCCGTGGGAACCCCTTACATGACGGAATTTGCCTCCTGCTG
GGGCCTGCTTGCCGGCAGTCTCGTCATCGCGGCGCCCGTAGTGTTCTTGA
AGATCAAGGAGCATACGGACGTCGAAGCAGACCTCAACTTCTCGGACGAG
ACCGCTCAAGAAGTCGGTGTCCCGCTGGAAGACCATCCTTCTGAGAAGAA
GCAGGAGCCGGAGATGGCTATCGTGAAATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000164:1206311..1208041-

>ATCC10864_006244-T1 ID=ATCC10864_006244-T1|Name=ATCC10864_006244-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6108bp|location=Sequence derived from alignment at MCQH01000164:1206311..1208041- (Aspergillus niger ATCC 10864)
CATGGACGCCGTGGGAACCCCTTACATGACGGAATTTGCCTCCTGCTGGG
GCCTGCTTGCCGGCAGTCTCGTCATCGCGGCGCCCGTAGTGTTCTTGAAG
ATCAAGGAGCATACGGACGTCGAAGCAGACCTCAACTTCTCGGACGAGAC
CGCTCAAGAAGTCGGTGTCCCGCTGGAAGACCATCCTTCTGAGAAGAAGC
AGGAGCCGGAGATGGCTATCGTGAAATAAGTTCATGGGTTCACTGACTAA
TAACGCTCGAAAATTGGCCAACTTCGCCGGTTTCTACAAAGGCATCCAGT
CTGCTGGTGCAGCTGGCATGTGGCGGTACCTTTGGGTCAAAACCTGCACT
CTGAAGCTGGTCAGGTGAATGATGGCACCTACATCGCTTTCATGGTGCTC
ATGGCGCTTGGCTTTGTCCTTGCCTGGGCCCTCTCAGACTCGAAGTATGT
CAAGCGCAAGGATGGCTCGCATGTCATTGTGATGAAGAACCCCACGTGGA
AATCCGAATTCAAAGGTCTCTACGACACCATTCGCACCGACTATTACATC
ATCCTCTTCTTTCCCATGTTCTTGGTGAGCAACTGGTTTACTGCATATCA
ATTCAACAGTGTCAATGGTGCTTATTTCACCATCCGGACGCGGGCCCTCA
ACAATCTCCTCTACTGGCTTATGCAGATGGTTGGCGCTTTCGTGTTCGGC
CAGATCCTCGATTTGAAGTACCTTACCCGCCCAGTCCGAGCCAAGCTTGG
TCTTGGACTCCTCTTTGCCCTCACCATGGGCGTTTGGGGCGGTGGTTATG
CCTTCCAGAAGACATACACCCGGAAGACCGTCGAGGCAGATACCGACTGG
ACGACCAGCGGCTATGTTGGGCCCATGTTCTTGTACATGTTTTATGGGTT
CTATGACGCTGCCTTCCAGACTTGTGCATATTGATGGCTACCACTACAAC
GGGACAGGAAGACCTCCATCATGAGAAGGAAGTCCCCGCGGTCACTTCAG
ATCCAGAAGCCGGTCATGAACCCCAGCTCACCGGTAAAACGTGGATGTAC
AAACCGATCAAGATCGGTCCCTGGTCGTTGCCGTACTTTGCCTCCCCAGA
ATCCCAGCTTCTGCTGGTCTCCTTCGTGTGCTTCCTCTGTCCGGGCATGT
TCAATGCGGTCAGCGGTTTGGGCGGGGGTGGTCAGCTGGACCCTACCGAT
GTCAGCGACTCCAACACCGCTCTGTACAGCACCTTTGCAGTAGTTGGTTT
CTTCGCCGGGTCCATCGCAAACCGCATTGGTCTCCGTCTGACTCTCTCTA
TTGGTGGCTTTGGCTACTTCCTCTATGTGGCTTCCCTTTTGTCGTACAAC
CATAACAAGAACTCCGGCTTCCTGATCTTTGCGGGCGCGCTATTAGGTGT
CTGCGGTGGTCTGCTGTGGTGTGCGCAGGGTGCAGTCATGATGAGCTACC
CGAATGAAAAGGAGAAGGGTAAATTCATCGCTATTTTCTGGGTGATCTTC
AACCTGGGTGGCGTGATTGGAAGCTTGCATGGACGCCGTGGGAACCCCTT
ACATGACGGAATTTGCCTCCTGCTGGGGCCTGCTTGCCGGCAGTCTCGTC
ATCGCGGCGCCCGTAGTGTTCTTGAAGATCAAGGAGCATACGGACGTCGA
AGCAGACCTCAACTTCTCGGACGAGACCGCTCAAGAAGTCGGTGTCCCGC
TGGAAGACCATCCTTCTGAGAAGAAGCAGGAGCCGGAGATGGCTATCGTG
AAATAAGTTCATGGGTTCACTGACTAATAACGCTCGAAAATTGGCCAACT
TCGCCGGTTTCTACAAAGGCATCCAGTCTGCTGGTGCAGCTGGCATGTGG
CGGTACCTTTGGGTCAAAACCTGCACTCTGAAGCTGGTCAGGTGAATGAT
GGCACCTACATCGCTTTCATGGTGCTCATGGCGCTTGGCTTTGTCCTTGC
CTGGGCCCTCTCAGACTCGAAGTATGTCAAGCGCAAGGATGGCTCGCATG
TCATTGTGATGAAGAACCCCACGTGGAAATCCGAATTCAAAGGTCTCTAC
GACACCATTCGCACCGACTATTACATCATCCTCTTCTTTCCCATGTTCTT
GGTGAGCAACTGGTTTACTGCATATCAATTCAACAGTGTCAATGGTGCTT
ATTTCACCATCCGGACGCGGGCCCTCAACAATCTCCTCTACTGGCTTATG
CAGATGGTTGGCGCTTTCGTGTTCGGCCAGATCCTCGATTTGAAGTACCT
TACCCGCCCAGTCCGAGCCAAGCTTGGTCTTGGACTCCTCTTTGCCCTCA
CCATGGGCGTTTGGGGCGGTGGTTATGCCTTCCAGAAGACATACACCCGG
AAGACCGTCGAGGCAGATACCGACTGGACGACCAGCGGCTATGTTGGGCC
CATGTTCTTGTACATGTTTTATGGGTTCTATGACGCTGCCTTCCAGACTT
GTGCATATTGATGGCTACCACTACAACGGGACAGGAAGACCTCCATCATG
AGAAGGAAGTCCCCGCGGTCACTTCAGATCCAGAAGCCGGTCATGAACCC
CAGCTCACCGGTAAAACGTGGATGTACAAACCGATCAAGATCGGTCCCTG
GTCGTTGCCGTACTTTGCCTCCCCAGAATCCCAGCTTCTGCTGGTCTCCT
TCGTGTGCTTCCTCTGTCCGGGCATGTTCAATGCGGTCAGCGGTTTGGGC
GGGGGTGGTCAGCTGGACCCTACCGATGTCAGCGACTCCAACACCGCTCT
GTACAGCACCTTTGCAGTAGTTGGTTTCTTCGCCGGGTCCATCGCAAACC
GCATTGGTCTCCGTCTGACTCTCTCTATTGGTGGCTTTGGCTACTTCCTC
TATGTGGCTTCCCTTTTGTCGTACAACCATAACAAGAACTCCGGCTTCCT
GATCTTTGCGGGCGCGCTATTAGGTGTCTGCGGTGGTCTGCTGTGGTGTG
CGCAGGGTGCAGTCATGATGAGCTACCCGAATGAAAAGGAGAAGGGTAAA
TTCATCGCTATTTTCTGGGTGATCTTCAACCTGGGTGGCGTGATTGGAAG
CTTGCATGGACGCCGTGGGAACCCCTTACATGACGGAATTTGCCTCCTGC
TGGGGCCTGCTTGCCGGCAGTCTCGTCATCGCGGCGCCCGTAGTGTTCTT
GAAGATCAAGGAGCATACGGACGTCGAAGCAGACCTCAACTTCTCGGACG
AGACCGCTCAAGAAGTCGGTGTCCCGCTGGAAGACCATCCTTCTGAGAAG
AAGCAGGAGCCGGAGATGGCTATCGTGAAATAAGTTCATGGGTTCACTGA
CTAATAACGCTCGAAAATTGGCCAACTTCGCCGGTTTCTACAAAGGCATC
CAGTCTGCTGGTGCAGCTGGCATGTGGCGGTACCTTTGGGTCAAAACCTG
CACTCTGAAGCTGGTCAGGTGAATGATGGCACCTACATCGCTTTCATGGT
GCTCATGGCGCTTGGCTTTGTCCTTGCCTGGGCCCTCTCAGACTCGAAGT
ATGTCAAGCGCAAGGATGGCTCGCATGTCATTGTGATGAAGAACCCCACG
TGGAAATCCGAATTCAAAGGTCTCTACGACACCATTCGCACCGACTATTA
CATCATCCTCTTCTTTCCCATGTTCTTGGTGAGCAACTGGTTTACTGCAT
ATCAATTCAACAGTGTCAATGGTGCTTATTTCACCATCCGGACGCGGGCC
CTCAACAATCTCCTCTACTGGCTTATGCAGATGGTTGGCGCTTTCGTGTT
CGGCCAGATCCTCGATTTGAAGTACCTTACCCGCCCAGTCCGAGCCAAGC
TTGGTCTTGGACTCCTCTTTGCCCTCACCATGGGCGTTTGGGGCGGTGGT
TATGCCTTCCAGAAGACATACACCCGGAAGACCGTCGAGGCAGATACCGA
CTGGACGACCAGCGGCTATGTTGGGCCCATGTTCTTGTACATGTTTTATG
GGTTCTATGACGCTGCCTTCCAGACTTGTGCATATTGATGGCTACCACTA
CAACGGGACAGGAAGACCTCCATCATGAGAAGGAAGTCCCCGCGGTCACT
TCAGATCCAGAAGCCGGTCATGAACCCCAGCTCACCGGTAAAACGTGGAT
GTACAAACCGATCAAGATCGGTCCCTGGTCGTTGCCGTACTTTGCCTCCC
CAGAATCCCAGCTTCTGCTGGTCTCCTTCGTGTGCTTCCTCTGTCCGGGC
ATGTTCAATGCGGTCAGCGGTTTGGGCGGGGGTGGTCAGCTGGACCCTAC
CGATGTCAGCGACTCCAACACCGCTCTGTACAGCACCTTTGCAGTAGTTG
GTTTCTTCGCCGGGTCCATCGCAAACCGCATTGGTCTCCGTCTGACTCTC
TCTATTGGTGGCTTTGGCTACTTCCTCTATGTGGCTTCCCTTTTGTCGTA
CAACCATAACAAGAACTCCGGCTTCCTGATCTTTGCGGGCGCGCTATTAG
GTGTCTGCGGTGGTCTGCTGTGGTGTGCGCAGGGTGCAGTCATGATGAGC
TACCCGAATGAAAAGGAGAAGGGTAAATTCATCGCTATTTTCTGGGTGAT
CTTCAACCTGGGTGGCGTGATTGGAAGCTTGCATGGACGCCGTGGGAACC
CCTTACATGACGGAATTTGCCTCCTGCTGGGGCCTGCTTGCCGGCAGTCT
CGTCATCGCGGCGCCCGTAGTGTTCTTGAAGATCAAGGAGCATACGGACG
TCGAAGCAGACCTCAACTTCTCGGACGAGACCGCTCAAGAAGTCGGTGTC
CCGCTGGAAGACCATCCTTCTGAGAAGAAGCAGGAGCCGGAGATGGCTAT
CGTGAAATAAGTTCATGGGTTCACTGACTAATAACGCTCGAAAATTGGCC
AACTTCGCCGGTTTCTACAAAGGCATCCAGTCTGCTGGTGCAGCTGGCAT
GTGGCGGTACCTTTGGGTCAAAACCTGCACTCTGAAGCTGGTCAGGTGAA
TGATGGCACCTACATCGCTTTCATGGTGCTCATGGCGCTTGGCTTTGTCC
TTGCCTGGGCCCTCTCAGACTCGAAGTATGTCAAGCGCAAGGATGGCTCG
CATGTCATTGTGATGAAGAACCCCACGTGGAAATCCGAATTCAAAGGTCT
CTACGACACCATTCGCACCGACTATTACATCATCCTCTTCTTTCCCATGT
TCTTGGTGAGCAACTGGTTTACTGCATATCAATTCAACAGTGTCAATGGT
GCTTATTTCACCATCCGGACGCGGGCCCTCAACAATCTCCTCTACTGGCT
TATGCAGATGGTTGGCGCTTTCGTGTTCGGCCAGATCCTCGATTTGAAGT
ACCTTACCCGCCCAGTCCGAGCCAAGCTTGGTCTTGGACTCCTCTTTGCC
CTCACCATGGGCGTTTGGGGCGGTGGTTATGCCTTCCAGAAGACATACAC
CCGGAAGACCGTCGAGGCAGATACCGACTGGACGACCAGCGGCTATGTTG
GGCCCATGTTCTTGTACATGTTTTATGGGTTCTATGACGCTGCCTTCCAG
ACTTGTGCATATTGATGGCTACCACTACAACGGGACAGGAAGACCTCCAT
CATGAGAAGGAAGTCCCCGCGGTCACTTCAGATCCAGAAGCCGGTCATGA
ACCCCAGCTCACCGGTAAAACGTGGATGTACAAACCGATCAAGATCGGTC
CCTGGTCGTTGCCGTACTTTGCCTCCCCAGAATCCCAGCTTCTGCTGGTC
TCCTTCGTGTGCTTCCTCTGTCCGGGCATGTTCAATGCGGTCAGCGGTTT
GGGCGGGGGTGGTCAGCTGGACCCTACCGATGTCAGCGACTCCAACACCG
CTCTGTACAGCACCTTTGCAGTAGTTGGTTTCTTCGCCGGGTCCATCGCA
AACCGCATTGGTCTCCGTCTGACTCTCTCTATTGGTGGCTTTGGCTACTT
CCTCTATGTGGCTTCCCTTTTGTCGTACAACCATAACAAGAACTCCGGCT
TCCTGATCTTTGCGGGCGCGCTATTAGGTGTCTGCGGTGGTCTGCTGTGG
TGTGCGCAGGGTGCAGTCATGATGAGCTACCCGAATGAAAAGGAGAAGGG
TAAATTCATCGCTATTTTCTGGGTGATCTTCAACCTGGGTGGCGTGATTG
GAAGCTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006244ATCC10864_006244Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006244-T1ATCC10864_006244-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006244-T1.cdsATCC10864_006244-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006244-T1.exon4ATCC10864_006244-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006244-T1.exon3ATCC10864_006244-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006244-T1.exon2ATCC10864_006244-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006244-T1.exon1ATCC10864_006244-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
PFAMPF05978
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:1206311..1208041 -
Powered by Drupal