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ATCC10864_006248-T1, ATCC10864_006248-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006248-T1
Unique NameATCC10864_006248-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:1219242..1220544-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006248-T1 ID=ATCC10864_006248-T1|Name=ATCC10864_006248-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1303bp|location=Sequence derived from alignment at MCQH01000164:1219242..1220544- (Aspergillus niger ATCC 10864)
ATGTGTGTTTCCCATCCCTGGGAAGCGGCTTTCCTCATTGATTCATTCTA
ATGTCCCTTTTTTAGGAGAGTAATCATTAGGGAGACTAGCCTTGAAGCTT
CAGAATACATTGCAGATTACATCATTAGTATGTCTTCCCGGAAACTCGTC
GTGCTTTCATCGTATTCTTCATTCTGCCACACCTCTATGAATTTGTCTGC
TGTATGCGTTCACTTACTGATTATGCGGTCTAGGTCGCATAAAGTCGTTC
AAGCCCAGTGAAGACCGGCCCTTTGTGCTGGGACTCCCGACTGGTAGCAG
TCCTGAGATAATTTATAAGACTCTGGTGCGCCGGCACAGGGACGGTGATA
TCTCGTTCAGAAATGTCGTAACGTTCAATATGGTATGCATTAGTAGCCCC
CTCCCCCCCCTTCTTTCATGCAAGCACTGTTTTCTTTGCTAAACAAACTA
GGACGAATACGTTGGACTGCCTCGTGACCATCCGGAGTCCTACCACAGCT
TCATGTACAAGCACTTCTTCTCCCACGTGGATATTCCGCCCCAGAACATC
AATATCCTTGATGGTAACGCACCCGATCTCGCAGCTGAGTGTTCGTCCTT
TGAGGCGCGAATTGCTCGCTATGGCGGTATTGAGCTCTTCCTGGGTGGCG
TGGGTCCAGATGGGCATATCGCTTTCAATGAACCAGGCTCCTCCTTGAGT
AGTCGTACTCGTGTCAAGACCCTGGCATATGACACAATCCTGGCTAACTC
GCGGTTTTTTGGCAATGACTTGGACTTGGTGCCGCGGAGGTCACTGACCG
TGGGTATTCAGACTATCATGGATGCTCGCGAAGTAGTCATCGTGGCCACC
GGTGCTCACAAGGCTCTTGCTGTGGAGAAAGGCCTGGAAGGCGGCATCAA
CCACATGTGGACACTCTCAGCGCTGCAGCTACACCCATATGCGCTGATTG
TCTGCGACCGAGATGCAACTCTGGAGCTGAAGGTCAAGACTGTTCGCTAT
TTCGAATCAATTGAACAATCCGGCACGGATGCACGTACTCAGGGTCCGCC
TCTTGTCTACAGACCCAGGACATATGTTCCTGCCCCAGTGGGTGTCGTGA
AACTCCAGCCGCCGCACATTCCTCAGAAAGCACCCAAGGATCTCCGAATC
AACACGGAACTTAACACATCGGTAGAAGACGAGGAACTCACACCAGACAG
CATGTCTTCACGTATGGTTGACTCGGCGATTGGAGGGCTGGATTCGACTC
TGAAGGGGGACTTGTTCTTTGATCACATGGGCTCACGGGTTGCATCGCAT
TGA
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Coding sequence (CDS) from alignment at MCQH01000164:1219242..1220544-

>ATCC10864_006248-T1 ID=ATCC10864_006248-T1|Name=ATCC10864_006248-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3015bp|location=Sequence derived from alignment at MCQH01000164:1219242..1220544- (Aspergillus niger ATCC 10864)
GACGAATACGTTGGACTGCCTCGTGACCATCCGGAGTCCTACCACAGCTT
CATGTACAAGCACTTCTTCTCCCACGTGGATATTCCGCCCCAGAACATCA
ATATCCTTGATGGTAACGCACCCGATCTCGCAGCTGAGTGTTCGTCCTTT
GAGGCGCGAATTGCTCGCTATGGCGGTATTGAGCTCTTCCTGGGTGGCGT
GGGTCCAGATGGGCATATCGCTTTCAATGAACCAGGCTCCTCCTTGAGTA
GTCGTACTCGTGTCAAGACCCTGGCATATGACACAATCCTGGCTAACTCG
CGGTTTTTTGGCAATGACTTGGACTTGGTGCCGCGGAGGTCACTGACCGT
GGGTATTCAGACTATCATGGATGCTCGCGAAGTAGTCATCGTGGCCACCG
GTGCTCACAAGGCTCTTGCTGTGGAGAAAGGCCTGGAAGGCGGCATCAAC
CACATGTGGACACTCTCAGCGCTGCAGCTACACCCATATGCGCTGATTGT
CTGCGACCGAGATGCAACTCTGGAGCTGAAGGTCAAGACTGTTCGCTATT
TCGAATCAATTGAACAATCCGGCACGGATGCACGTACTCAGGGTCCGCCT
CTTGTCTACAGACCCAGGACATATGTTCCTGCCCCAGTGGGTGTCGTGAA
ACTCCAGCCGCCGCACATTCCTCAGAAAGCACCCAAGGATCTCCGAATCA
ACACGGAACTTAACACATCGGTAGAAGACGAGGAACTCACACCAGACAGC
ATGTCTTCACGTATGGTTGACTCGGCGATTGGAGGGCTGGATTCGACTCT
GAAGGGGGACTTGTTCTTTGATCACATGGGCTCACGGGTTGCATCGCATT
GAGTCGCATAAAGTCGTTCAAGCCCAGTGAAGACCGGCCCTTTGTGCTGG
GACTCCCGACTGGTAGCAGTCCTGAGATAATTTATAAGACTCTGGTGCGC
CGGCACAGGGACGGTGATATCTCGTTCAGAAATGTCGTAACGTTCAATAT
GATGTGACGAATACGTTGGACTGCCTCGTGACCATCCGGAGTCCTACCAC
AGCTTCATGTACAAGCACTTCTTCTCCCACGTGGATATTCCGCCCCAGAA
CATCAATATCCTTGATGGTAACGCACCCGATCTCGCAGCTGAGTGTTCGT
CCTTTGAGGCGCGAATTGCTCGCTATGGCGGTATTGAGCTCTTCCTGGGT
GGCGTGGGTCCAGATGGGCATATCGCTTTCAATGAACCAGGCTCCTCCTT
GAGTAGTCGTACTCGTGTCAAGACCCTGGCATATGACACAATCCTGGCTA
ACTCGCGGTTTTTTGGCAATGACTTGGACTTGGTGCCGCGGAGGTCACTG
ACCGTGGGTATTCAGACTATCATGGATGCTCGCGAAGTAGTCATCGTGGC
CACCGGTGCTCACAAGGCTCTTGCTGTGGAGAAAGGCCTGGAAGGCGGCA
TCAACCACATGTGGACACTCTCAGCGCTGCAGCTACACCCATATGCGCTG
ATTGTCTGCGACCGAGATGCAACTCTGGAGCTGAAGGTCAAGACTGTTCG
CTATTTCGAATCAATTGAACAATCCGGCACGGATGCACGTACTCAGGGTC
CGCCTCTTGTCTACAGACCCAGGACATATGTTCCTGCCCCAGTGGGTGTC
GTGAAACTCCAGCCGCCGCACATTCCTCAGAAAGCACCCAAGGATCTCCG
AATCAACACGGAACTTAACACATCGGTAGAAGACGAGGAACTCACACCAG
ACAGCATGTCTTCACGTATGGTTGACTCGGCGATTGGAGGGCTGGATTCG
ACTCTGAAGGGGGACTTGTTCTTTGATCACATGGGCTCACGGGTTGCATC
GCATTGAGTCGCATAAAGTCGTTCAAGCCCAGTGAAGACCGGCCCTTTGT
GCTGGGACTCCCGACTGGTAGCAGTCCTGAGATAATTTATAAGACTCTGG
TGCGCCGGCACAGGGACGGTGATATCTCGTTCAGAAATGTCGTAACGTTC
AATATGATGTGACGAATACGTTGGACTGCCTCGTGACCATCCGGAGTCCT
ACCACAGCTTCATGTACAAGCACTTCTTCTCCCACGTGGATATTCCGCCC
CAGAACATCAATATCCTTGATGGTAACGCACCCGATCTCGCAGCTGAGTG
TTCGTCCTTTGAGGCGCGAATTGCTCGCTATGGCGGTATTGAGCTCTTCC
TGGGTGGCGTGGGTCCAGATGGGCATATCGCTTTCAATGAACCAGGCTCC
TCCTTGAGTAGTCGTACTCGTGTCAAGACCCTGGCATATGACACAATCCT
GGCTAACTCGCGGTTTTTTGGCAATGACTTGGACTTGGTGCCGCGGAGGT
CACTGACCGTGGGTATTCAGACTATCATGGATGCTCGCGAAGTAGTCATC
GTGGCCACCGGTGCTCACAAGGCTCTTGCTGTGGAGAAAGGCCTGGAAGG
CGGCATCAACCACATGTGGACACTCTCAGCGCTGCAGCTACACCCATATG
CGCTGATTGTCTGCGACCGAGATGCAACTCTGGAGCTGAAGGTCAAGACT
GTTCGCTATTTCGAATCAATTGAACAATCCGGCACGGATGCACGTACTCA
GGGTCCGCCTCTTGTCTACAGACCCAGGACATATGTTCCTGCCCCAGTGG
GTGTCGTGAAACTCCAGCCGCCGCACATTCCTCAGAAAGCACCCAAGGAT
CTCCGAATCAACACGGAACTTAACACATCGGTAGAAGACGAGGAACTCAC
ACCAGACAGCATGTCTTCACGTATGGTTGACTCGGCGATTGGAGGGCTGG
ATTCGACTCTGAAGGGGGACTTGTTCTTTGATCACATGGGCTCACGGGTT
GCATCGCATTGAGTCGCATAAAGTCGTTCAAGCCCAGTGAAGACCGGCCC
TTTGTGCTGGGACTCCCGACTGGTAGCAGTCCTGAGATAATTTATAAGAC
TCTGGTGCGCCGGCACAGGGACGGTGATATCTCGTTCAGAAATGTCGTAA
CGTTCAATATGATGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004342glucosamine-6-phosphate deaminase activity
Vocabulary: Biological Process
TermDefinition
GO:0006044N-acetylglucosamine metabolic process
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GNPDA1_2ATCC10864_006248Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006248-T1ATCC10864_006248-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006248-T1.cdsATCC10864_006248-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006248-T1.exon3ATCC10864_006248-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006248-T1.exon2ATCC10864_006248-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006248-T1.exon1ATCC10864_006248-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR037171
InterProIPR006148
InterProIPR018321
InterProIPR004547
PFAMPF01182
Properties
Property NameValue
ProductGlucosamine-6-phosphate isomerase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:1219242..1220544 -
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