You are here

Home

ATCC10864_006261-T1, ATCC10864_006261-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006261-T1
Unique NameATCC10864_006261-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:1264340..1265262-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006261-T1 ID=ATCC10864_006261-T1|Name=ATCC10864_006261-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=923bp|location=Sequence derived from alignment at MCQH01000164:1264340..1265262- (Aspergillus niger ATCC 10864)
ATGCAACGCCGTGCAGCACTTACCGGCCTCAGCTATATGCGTCGCTGCTC
AACGTTTACTGGGTTGCGTTATAACTTGCTTCCTGAGCATCAACTTCCAC
CTTGGACTCAGCATAAGGTAGCACTTCCGTCTAATAAAAGGAGCTTTTCC
AGTTCGCCCTTTTGGTGTAAAAAGAAGGACAAGACGAAAACTACATCTGC
TGCAGATTCTGCGAAGCCGTTGCCAAAAGCAGGCGCAGGCTCCGAAGACC
CGCATGATTTTTCACAGCTGCATGACGGCATAGCGGCTGCCCTGTCTCGA
CTCAGAGACGAACTCTCTAAGATGCGTGTCGGGGGGAGGTTCAATACCGT
ATCAATTGAGAGTCTTCGTGTGCAGCTGAGCAAGAGCAGCAAGCAATCGA
TCAAGCTGGGCGACCTTGCTCAAGTTGTTCCTAAGGGTGGACGAATGGTG
ACTATCTTGGCCTCTGACGAAGATGTGAGTTACTGGCGCCTTAAAAGAAT
GTCTTTGCTATCACGAAGCCTACAGATCCTCTCAATCTTCCATTTTTGCT
CTAACGCAGACTGTTATCGATATAGCATGTGAAGCCCATTCGCTCGTCAA
TAGTCTCCTCCAACTTGTCGTTAACCCCGCAAGCCGACCCTCACAACTCC
CTTCAGCTCAATGTCACGATCCCCCCACCGACTAAAGAGTCCCGGGATCA
AACGATCGCTATGGCAAAGGCGGCAATGGAGAAAGCTGCCGGTGCCGTCC
GTGATTCACGCAGCGCTGTGCATAAACGTCTTCAGGATCTGCAGAAAAAG
AAGATTGCCAGGCCAGATGACGTTCGGAAGGCCCAGGAACAGATGGAAAA
GCTTGCAGAGAAAGGGCAGAAGGAGGTGAAGGAACTGTTTGAGACTACAA
GGAAGGCTATGGAGCGGGCGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000164:1264340..1265262-

>ATCC10864_006261-T1 ID=ATCC10864_006261-T1|Name=ATCC10864_006261-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1644bp|location=Sequence derived from alignment at MCQH01000164:1264340..1265262- (Aspergillus niger ATCC 10864)
CATGTGAAGCCCATTCGCTCGTCAATAGTCTCCTCCAACTTGTCGTTAAC
CCCGCAAGCCGACCCTCACAACTCCCTTCAGCTCAATGTCACGATCCCCC
CACCGACTAAAGAGTCCCGGGATCAAACGATCGCTATGGCAAAGGCGGCA
ATGGAGAAAGCTGCCGGTGCCGTCCGTGATTCACGCAGCGCTGTGCATAA
ACGTCTTCAGGATCTGCAGAAAAAGAAGATTGCCAGGCCAGATGACGTTC
GGAAGGCCCAGGAACAGATGGAAAAGCTTGCAGAGAAAGGGCAGAAGGAG
GTGAAGGAACTGTTTGAGACTACAAGGAAGGCTATGGAGCGGGCGTAAAT
GCAACGCCGTGCAGCACTTACCGGCCTCAGCTATATGCGTCGCTGCTCAA
CGTTTACTGGGTTGCGTTATAACTTGCTTCCTGAGCATCAACTTCCACCT
TGGACTCAGCATAAGGTAGCACTTCCGTCTAATAAAAGGAGCTTTTCCAG
TTCGCCCTTTTGGTGTAAAAAGAAGGACAAGACGAAAACTACATCTGCTG
CAGATTCTGCGAAGCCGTTGCCAAAAGCAGGCGCAGGCTCCGAAGACCCG
CATGATTTTTCACAGCTGCATGACGGCATAGCGGCTGCCCTGTCTCGACT
CAGAGACGAACTCTCTAAGATGCGTGTCGGGGGGAGGTTCAATACCGTAT
CAATTGAGAGTCTTCGTGTGCAGCTGAGCAAGAGCAGCAAGCAATCGATC
AAGCTGGGCGACCTTGCTCAAGTTGTTCCTAAGGGTGGACGAATGGTGAC
TATCTTGGCCTCTGACGAAGATCATGTGAAGCCCATTCGCTCGTCAATAG
TCTCCTCCAACTTGTCGTTAACCCCGCAAGCCGACCCTCACAACTCCCTT
CAGCTCAATGTCACGATCCCCCCACCGACTAAAGAGTCCCGGGATCAAAC
GATCGCTATGGCAAAGGCGGCAATGGAGAAAGCTGCCGGTGCCGTCCGTG
ATTCACGCAGCGCTGTGCATAAACGTCTTCAGGATCTGCAGAAAAAGAAG
ATTGCCAGGCCAGATGACGTTCGGAAGGCCCAGGAACAGATGGAAAAGCT
TGCAGAGAAAGGGCAGAAGGAGGTGAAGGAACTGTTTGAGACTACAAGGA
AGGCTATGGAGCGGGCGTAAATGCAACGCCGTGCAGCACTTACCGGCCTC
AGCTATATGCGTCGCTGCTCAACGTTTACTGGGTTGCGTTATAACTTGCT
TCCTGAGCATCAACTTCCACCTTGGACTCAGCATAAGGTAGCACTTCCGT
CTAATAAAAGGAGCTTTTCCAGTTCGCCCTTTTGGTGTAAAAAGAAGGAC
AAGACGAAAACTACATCTGCTGCAGATTCTGCGAAGCCGTTGCCAAAAGC
AGGCGCAGGCTCCGAAGACCCGCATGATTTTTCACAGCTGCATGACGGCA
TAGCGGCTGCCCTGTCTCGACTCAGAGACGAACTCTCTAAGATGCGTGTC
GGGGGGAGGTTCAATACCGTATCAATTGAGAGTCTTCGTGTGCAGCTGAG
CAAGAGCAGCAAGCAATCGATCAAGCTGGGCGACCTTGCTCAAGTTGTTC
CTAAGGGTGGACGAATGGTGACTATCTTGGCCTCTGACGAAGAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006261ATCC10864_006261Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006261-T1ATCC10864_006261-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006261-T1.cdsATCC10864_006261-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006261-T1.exon2ATCC10864_006261-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006261-T1.exon1ATCC10864_006261-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01765
InterProIPR023584
InterProIPR002661
InterProIPR036191
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:1264340..1265262 -
Powered by Drupal