You are here

ATCC10864_006264-T1, ATCC10864_006264-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006264-T1
Unique NameATCC10864_006264-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000164:1274654..1276049-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006264-T1 ID=ATCC10864_006264-T1|Name=ATCC10864_006264-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1396bp|location=Sequence derived from alignment at MCQH01000164:1274654..1276049- (Aspergillus niger ATCC 10864)
ATGTCCTCAACGACTACAGGCTCCTCTTCAAGTGCCACTAGTACAGATCG TAATGGGAATAACAACAGCTCAAGCCCTACTAGTTCGCCTCTACTATTTT TCGTCGCCCTCGGGTTTGGTGTTGTTTTCACCAATCTATGGTATGTCCAA ATTGGTATCACTAGGCCTTTGCTGCGCTTAGATGCTCATCTAACCATCGC GTTCCAGGATTATCGTGGGGGTAAAATATTGCTTTCGATATAATCAACGC AATCGCCAATTACGCAGTGAAGTGACAGGCGAGCCTATAGATCTGGTCGC TATGCCACGAACACACCGAAGACGTCGAGAAAAGAAGTTGATGACTATGG ACGACGTTAACGAGAGGTTTCCACTGACGAAGTATAAAGCATGGAGGTCA TCCCGGGAGAATGAAGGCCTCTCTGGTGCAGGCGGGATCTCGGCACCGAA TAGCCGGTCGCAAAGCCCCAAGGATGAGAACTACATGTTGTCCGCTTCGC TTGGCGCTCCTTCATCCATGGTGGCATCGCCACTCAAAAGCCATCAGCGG GTTGATTCCAACACTTCGCAGGCCTCTGCACCACTAGAAAACCTGGAGAC AACGCTACCACAATCTGAAGAGAAGAGCCAGAGATATTCCGAGCCAAGCC CTACAAACATCGGAGTAAACGACAACGCCAACATATCAGCCCCGGAGCAG CCCCGTAACCACGCGCTCAACCATGTCATCGTAGAGGATGTTGGAGACCT GGAAGACCATATCCGCACCGCTGTACCTGCCGATTTCCTGGCAAATCCAG GGGATACTTGTGCTATATGTCTCGATACGATCGAGGATGAAGATGATATA CGGGGGCTTACATGTGGACATGCTTTTCATGCGTCTTGTGTTGACCCATG GTTGACAAGTCGACGGGCTTGCTGTCCCCTATGTAAGGCAGATTACTACA TCCCGAAACCTCGCGCAGAAACTTCTGAATTGGCTCCTAGCTCAGAACGT CAAGGTCGACGGGGCATGGCACGAGTGACACCTATAAACCCGCCACAGGC TGTTTTTATAGGTGGAAGAGTGAACTTTCTGCGGCCAACGTCGGGATCCC CGGAGCAGCATGTGCAACGGCGCCCGTTGACCCACAGAGCGGGCTTCTCT CGATTGCGCCTTTGGCGAGCCTCTCAATCTAACCACCAGCCCACATCTCC TGTGCCTGATACTTCGTCTGGACAGCCAGATCGGAGGGCTCAAAGGCTAG CACTCTTCACTGCATCCTACTTTCCCCTGAACTTCAGTCTCCGAGGTAAT CGTGCATCGAGAGGACTTGCAAATAGGAACGCAGACGTCCGACATTCAGA AAACAACCGATCGCTTGGGGAACTTGAAGCCGGACCACCTATATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000164:1274654..1276049-

>ATCC10864_006264-T1 ID=ATCC10864_006264-T1|Name=ATCC10864_006264-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2658bp|location=Sequence derived from alignment at MCQH01000164:1274654..1276049- (Aspergillus niger ATCC 10864)
GATTATCGTGGGGGTAAAATATTGCTTTCGATATAATCAACGCAATCGCC
AATTACGCAGTGAAGTGACAGGCGAGCCTATAGATCTGGTCGCTATGCCA
CGAACACACCGAAGACGTCGAGAAAAGAAGTTGATGACTATGGACGACGT
TAACGAGAGGTTTCCACTGACGAAGTATAAAGCATGGAGGTCATCCCGGG
AGAATGAAGGCCTCTCTGGTGCAGGCGGGATCTCGGCACCGAATAGCCGG
TCGCAAAGCCCCAAGGATGAGAACTACATGTTGTCCGCTTCGCTTGGCGC
TCCTTCATCCATGGTGGCATCGCCACTCAAAAGCCATCAGCGGGTTGATT
CCAACACTTCGCAGGCCTCTGCACCACTAGAAAACCTGGAGACAACGCTA
CCACAATCTGAAGAGAAGAGCCAGAGATATTCCGAGCCAAGCCCTACAAA
CATCGGAGTAAACGACAACGCCAACATATCAGCCCCGGAGCAGCCCCGTA
ACCACGCGCTCAACCATGTCATCGTAGAGGATGTTGGAGACCTGGAAGAC
CATATCCGCACCGCTGTACCTGCCGATTTCCTGGCAAATCCAGGGGATAC
TTGTGCTATATGTCTCGATACGATCGAGGATGAAGATGATATACGGGGGC
TTACATGTGGACATGCTTTTCATGCGTCTTGTGTTGACCCATGGTTGACA
AGTCGACGGGCTTGCTGTCCCCTATGTAAGGCAGATTACTACATCCCGAA
ACCTCGCGCAGAAACTTCTGAATTGGCTCCTAGCTCAGAACGTCAAGGTC
GACGGGGCATGGCACGAGTGACACCTATAAACCCGCCACAGGCTGTTTTT
ATAGGTGGAAGAGTGAACTTTCTGCGGCCAACGTCGGGATCCCCGGAGCA
GCATGTGCAACGGCGCCCGTTGACCCACAGAGCGGGCTTCTCTCGATTGC
GCCTTTGGCGAGCCTCTCAATCTAACCACCAGCCCACATCTCCTGTGCCT
GATACTTCGTCTGGACAGCCAGATCGGAGGGCTCAAAGGCTAGCACTCTT
CACTGCATCCTACTTTCCCCTGAACTTCAGTCTCCGAGGTAATCGTGCAT
CGAGAGGACTTGCAAATAGGAACGCAGACGTCCGACATTCAGAAAACAAC
CGATCGCTTGGGGAACTTGAAGCCGGACCACCTATATGAATGTCCTCAAC
GACTACAGGCTCCTCTTCAAGTGCCACTAGTACAGATCGTAATGGGAATA
ACAACAGCTCAAGCCCTACTAGTTCGCCTCTACTATTTTTCGTCGCCCTC
GGGTTTGGTGTTGTTTTCACCAATCTATGGATTATCGTGGGGGTAAAATA
TTGCTTTCGATATAATCAACGCAATCGCCAATTACGCAGTGAAGTGACAG
GCGAGCCTATAGATCTGGTCGCTATGCCACGAACACACCGAAGACGTCGA
GAAAAGAAGTTGATGACTATGGACGACGTTAACGAGAGGTTTCCACTGAC
GAAGTATAAAGCATGGAGGTCATCCCGGGAGAATGAAGGCCTCTCTGGTG
CAGGCGGGATCTCGGCACCGAATAGCCGGTCGCAAAGCCCCAAGGATGAG
AACTACATGTTGTCCGCTTCGCTTGGCGCTCCTTCATCCATGGTGGCATC
GCCACTCAAAAGCCATCAGCGGGTTGATTCCAACACTTCGCAGGCCTCTG
CACCACTAGAAAACCTGGAGACAACGCTACCACAATCTGAAGAGAAGAGC
CAGAGATATTCCGAGCCAAGCCCTACAAACATCGGAGTAAACGACAACGC
CAACATATCAGCCCCGGAGCAGCCCCGTAACCACGCGCTCAACCATGTCA
TCGTAGAGGATGTTGGAGACCTGGAAGACCATATCCGCACCGCTGTACCT
GCCGATTTCCTGGCAAATCCAGGGGATACTTGTGCTATATGTCTCGATAC
GATCGAGGATGAAGATGATATACGGGGGCTTACATGTGGACATGCTTTTC
ATGCGTCTTGTGTTGACCCATGGTTGACAAGTCGACGGGCTTGCTGTCCC
CTATGTAAGGCAGATTACTACATCCCGAAACCTCGCGCAGAAACTTCTGA
ATTGGCTCCTAGCTCAGAACGTCAAGGTCGACGGGGCATGGCACGAGTGA
CACCTATAAACCCGCCACAGGCTGTTTTTATAGGTGGAAGAGTGAACTTT
CTGCGGCCAACGTCGGGATCCCCGGAGCAGCATGTGCAACGGCGCCCGTT
GACCCACAGAGCGGGCTTCTCTCGATTGCGCCTTTGGCGAGCCTCTCAAT
CTAACCACCAGCCCACATCTCCTGTGCCTGATACTTCGTCTGGACAGCCA
GATCGGAGGGCTCAAAGGCTAGCACTCTTCACTGCATCCTACTTTCCCCT
GAACTTCAGTCTCCGAGGTAATCGTGCATCGAGAGGACTTGCAAATAGGA
ACGCAGACGTCCGACATTCAGAAAACAACCGATCGCTTGGGGAACTTGAA
GCCGGACCACCTATATGAATGTCCTCAACGACTACAGGCTCCTCTTCAAG
TGCCACTAGTACAGATCGTAATGGGAATAACAACAGCTCAAGCCCTACTA
GTTCGCCTCTACTATTTTTCGTCGCCCTCGGGTTTGGTGTTGTTTTCACC
AATCTATG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006264ATCC10864_006264Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006264-T1ATCC10864_006264-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006264-T1.cdsATCC10864_006264-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006264-T1.exon2ATCC10864_006264-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006264-T1.exon1ATCC10864_006264-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001841
PFAMPF13639
PFAMPF17123
PFAMPF00097
InterProIPR013083
PFAMPF13445
PFAMPF14634
PFAMPF13923
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000164supercontigMCQH01000164:1274654..1276049 -