You are here

ATCC10864_006273-T1, ATCC10864_006273-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006273-T1
Unique NameATCC10864_006273-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:28488..29238+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006273-T1 ID=ATCC10864_006273-T1|Name=ATCC10864_006273-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=751bp|location=Sequence derived from alignment at MCQH01000166:28488..29238+ (Aspergillus niger ATCC 10864)
ATGCGTTTCTCTGTTGCCACCGTCGCTCTCTTCGCCAGCCTTGTTGCTGC CATCCCCCAGGATGTCGAGACTGTCTACTCCACTGAGGACGTGACCGTCG TCTCCTGCGCTCCCACCGTCACCAACTGCCCCGGTACTCTGCACGCCACC TCCACCCCCGAGGCCGTCGCTGCTGCCACCACTAGCGGCGCTGAGGGTGT CTCCCCCGTTGGTGTTACCAGCGCTGTCCCTGAGGCTCCCTCCGCCACCC CCGCTGCTGGCAGCTCCCCTGCTGGTGGTGCTGGTGCTGGTGTTGTTCCC TCTGGCGGCGCTCCCTCCGGTGCTGCCCCCAGCGGTGCCGCTGTTCCCTC CGGTGCTGCTGCCGTCGGTGGTGGCGCTGGCACCACTGCTGCCCCCCAGG TCACCGTTATCCCCGTGACCACCTGCGTTCCCACCGTCATCATGTCCACT AGCACCATCGGTGGTGGCTCCGGTGCCGGTGCCTACGGCTCTGGCTACCC CAGCGGCAAGCCCGCCAAGTCTTCCTCCCCTGTCATCCCTAGCGGTGCCG CTGCCTACGGCTCTGGCTACCCTAGCGGCAGTGCTACGTGAGTATTCTGA CTCCTGGAATAAATAAATAAACAATCGTACTAACAATACGCACAGCCCCT CCCCCTCTTCTGCTCTCTACACCGGTGCCGCCAGCTCCGTCAACGGCAAC GGCTTCGCTTTCGCTGGTGCCGCCGCCGCCGCTGCTTTCTTCCTGGCTTA G
back to top

Coding sequence (CDS) from alignment at MCQH01000166:28488..29238+

>ATCC10864_006273-T1 ID=ATCC10864_006273-T1|Name=ATCC10864_006273-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1386bp|location=Sequence derived from alignment at MCQH01000166:28488..29238+ (Aspergillus niger ATCC 10864)
ATGCGTTTCTCTGTTGCCACCGTCGCTCTCTTCGCCAGCCTTGTTGCTGC
CATCCCCCAGGATGTCGAGACTGTCTACTCCACTGAGGACGTGACCGTCG
TCTCCTGCGCTCCCACCGTCACCAACTGCCCCGGTACTCTGCACGCCACC
TCCACCCCCGAGGCCGTCGCTGCTGCCACCACTAGCGGCGCTGAGGGTGT
CTCCCCCGTTGGTGTTACCAGCGCTGTCCCTGAGGCTCCCTCCGCCACCC
CCGCTGCTGGCAGCTCCCCTGCTGGTGGTGCTGGTGCTGGTGTTGTTCCC
TCTGGCGGCGCTCCCTCCGGTGCTGCCCCCAGCGGTGCCGCTGTTCCCTC
CGGTGCTGCTGCCGTCGGTGGTGGCGCTGGCACCACTGCTGCCCCCCAGG
TCACCGTTATCCCCGTGACCACCTGCGTTCCCACCGTCATCATGTCCACT
AGCACCATCGGTGGTGGCTCCGGTGCCGGTGCCTACGGCTCTGGCTACCC
CAGCGGCAAGCCCGCCAAGTCTTCCTCCCCTGTCATCCCTAGCGGTGCCG
CTGCCTACGGCTCTGGCTACCCTAGCGGCAGTGCTACCCCCTCCCCCTCT
TCTGCTCTCTACACCGGTGCCGCCAGCTCCGTCAACGGCAACGGCTTCGC
TTTCGCTGGTGCCGCCGCCGCCGCTGCTTTCTTCCTGGCTTAGATGCGTT
TCTCTGTTGCCACCGTCGCTCTCTTCGCCAGCCTTGTTGCTGCCATCCCC
CAGGATGTCGAGACTGTCTACTCCACTGAGGACGTGACCGTCGTCTCCTG
CGCTCCCACCGTCACCAACTGCCCCGGTACTCTGCACGCCACCTCCACCC
CCGAGGCCGTCGCTGCTGCCACCACTAGCGGCGCTGAGGGTGTCTCCCCC
GTTGGTGTTACCAGCGCTGTCCCTGAGGCTCCCTCCGCCACCCCCGCTGC
TGGCAGCTCCCCTGCTGGTGGTGCTGGTGCTGGTGTTGTTCCCTCTGGCG
GCGCTCCCTCCGGTGCTGCCCCCAGCGGTGCCGCTGTTCCCTCCGGTGCT
GCTGCCGTCGGTGGTGGCGCTGGCACCACTGCTGCCCCCCAGGTCACCGT
TATCCCCGTGACCACCTGCGTTCCCACCGTCATCATGTCCACTAGCACCA
TCGGTGGTGGCTCCGGTGCCGGTGCCTACGGCTCTGGCTACCCCAGCGGC
AAGCCCGCCAAGTCTTCCTCCCCTGTCATCCCTAGCGGTGCCGCTGCCTA
CGGCTCTGGCTACCCTAGCGGCAGTGCTACCCCCTCCCCCTCTTCTGCTC
TCTACACCGGTGCCGCCAGCTCCGTCAACGGCAACGGCTTCGCTTTCGCT
GGTGCCGCCGCCGCCGCTGCTTTCTTCCTGGCTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006273ATCC10864_006273Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006273-T1.exon1ATCC10864_006273-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006273-T1.exon2ATCC10864_006273-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006273-T1.cdsATCC10864_006273-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006273-T1ATCC10864_006273-T1-proteinAspergillus niger ATCC 10864polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:28488..29238 +