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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000166:86142..87736+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_006295-T1 ID=ATCC10864_006295-T1|Name=ATCC10864_006295-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1595bp|location=Sequence derived from alignment at MCQH01000166:86142..87736+ (Aspergillus niger ATCC 10864)
ATGGCTCCCAAGAAGGACTCCAAGACCAAGGTCCGGGTGCAGCCCGTTCC
AGAGAAACGCGGCTATGAATTCGGAGGCCCGTATGTACTCAATGCCCAGT
TACAATTGACATTTGGGATACTGACCCTACAGTCTCGGTGCGTTCGGGAT
CGTGTTTGGTCTGCCCGTGCTGGTTTACAGCTTCACCTTCCTGTGTAACG
ATGTCTCCGGCTGCCCGGCACCTTCGTTACTACACCCTTCTACCGTGACG
CTTGACCAATTGAAGGCAGAGGTTGGCTGGCCCAAGGGAGGTTTTGCGGA
TTTTTACGACACAAGCGTGACACTCTGGGTCTTGGGCTATTATCTGCTTA
GCTTGGCGATGTACGTATTCCTGCCTGGCCAGGAGGTCGAGGGCACCGAA
TTGGCATGTGGAGGAAGATTGCCCTACAAGTTCAATGGTTGGTTTCTTCA
ATTGACTCGTATCTGCCTCTCTAACACGCCCTGCAGCTTTTCTGTCGGCC
GTCCTGATCCTCTCCGGCTGTGCGACGGGCACTTACATCTACGGCGCGGA
CTTTGCTGTCTGGACTTTTCTCTGGGACAACTATCTGCAGGTAATCACCG
CCAACCTGGTGATCTGTACTGTCATCTCCATCTTCGTCTATGCGAAGAGC
TTCACTGTTCCTGCCCCTGGGCAGCCCAACCCTGAGCTCCGCCAGCTAGC
TCCGGGTGGCCACACTGGCAACGCGTTGTATGATTTCTTCATTGGCAGAG
AGCTGAACCCCCGGGTACGCCTGCCAATTCCCTTCGTCAGCGAAGCTTCG
CGCACGATCGATATCAAGTCCTGGCTCGAAATGCGCCCCGGCTTGCTGGG
GTGGATCATCCTGAACTTGTCGAACATTGCCCGCCAGTACCGCACCTACG
GCTACATCACGGACTCGATCGTCATCTCGACTGCGTTCCAGGCGTTCTAC
GTCCTGGATGGCCTGTACATGGAGCCTGCCCTGCTGACTACTATGGACAT
TATTATGGACGGCTTCGGGTTCATGCTCTCGTTTGGCGATCTCGTCTGGG
TCCCTTTTATCTACAACTTCCAGACTCGCTACCTGGCCGTCTTTCCGTAT
GAGCTGGGCTTCAATGGCATTCTGCTCGTCCTGGCCGTTACCGCTGTGGG
CTACTCGATCTTCCGGGGCGCCAACAACCAGAAGAATCGGTTCCGCACCA
ACCCGAACGACCCCCGCGTCAAGCACCTCAAGTACATCCAGACGGCCAGT
GGCTCCAAGCTGATCACGTCTGGCTGGTGGGGAAGCGCCCGCCACATCAA
CTACCTGGGCGACTGGGTCATGTCGTGGTCATACTGCCTGCCTACGGGCA
TTGCCGGCTACGCTATTATTCAGACTATCAACCCGGCCACCGGGGACCTG
CAGAAGCAGGCAGTGCAGACCCCCGAGAGCCGGGGCTGGGGAATGATCTT
TACTTACTTCTTCCTGGTGTACTTTGGCACGCTGCTGATCCACCGTGAGC
AGCGGGACGAGGAGAAGTGCAGGCGCAAGTATGGAGCCGACTGGGACCGG
TATACGTCGTTGGTCCGAAGCCGGATCATTCCTGGCATTTACTGA back to topCoding sequence (CDS) from alignment at MCQH01000166:86142..87736+ >ATCC10864_006295-T1 ID=ATCC10864_006295-T1|Name=ATCC10864_006295-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4482bp|location=Sequence derived from alignment at MCQH01000166:86142..87736+ (Aspergillus niger ATCC 10864)
ATGGCTCCCAAGAAGGACTCCAAGACCAAGGTCCGGGTGCAGCCCGTTCC
AGAGAAACGCGGCTATGAATTCGGAGGCCCTCTCGGTGCGTTCGGGATCG
TGTTTGGTCTGCCCGTGCTGGTTTACAGCTTCACCTTCCTGTGTAACGAT
GTCTCCGGCTGCCCGGCACCTTCGTTACTACACCCTTCTACCGTGACGCT
TGACCAATTGAAGGCAGAGGTTGGCTGGCCCAAGGGAGGTTTTGCGGATT
TTTACGACACAAGCGTGACACTCTGGGTCTTGGGCTATTATCTGCTTAGC
TTGGCGATGTACGTATTCCTGCCTGGCCAGGAGGTCGAGGGCACCGAATT
GGCATGTGGAGGAAGATTGCCCTACAAGTTCAATGCTTTTCTGTCGGCCG
TCCTGATCCTCTCCGGCTGTGCGACGGGCACTTACATCTACGGCGCGGAC
TTTGCTGTCTGGACTTTTCTCTGGGACAACTATCTGCAGGTAATCACCGC
CAACCTGGTGATCTGTACTGTCATCTCCATCTTCGTCTATGCGAAGAGCT
TCACTGTTCCTGCCCCTGGGCAGCCCAACCCTGAGCTCCGCCAGCTAGCT
CCGGGTGGCCACACTGGCAACGCGTTGTATGATTTCTTCATTGGCAGAGA
GCTGAACCCCCGGGTACGCCTGCCAATTCCCTTCGTCAGCGAAGCTTCGC
GCACGATCGATATCAAGTCCTGGCTCGAAATGCGCCCCGGCTTGCTGGGG
TGGATCATCCTGAACTTGTCGAACATTGCCCGCCAGTACCGCACCTACGG
CTACATCACGGACTCGATCGTCATCTCGACTGCGTTCCAGGCGTTCTACG
TCCTGGATGGCCTGTACATGGAGCCTGCCCTGCTGACTACTATGGACATT
ATTATGGACGGCTTCGGGTTCATGCTCTCGTTTGGCGATCTCGTCTGGGT
CCCTTTTATCTACAACTTCCAGACTCGCTACCTGGCCGTCTTTCCGTATG
AGCTGGGCTTCAATGGCATTCTGCTCGTCCTGGCCGTTACCGCTGTGGGC
TACTCGATCTTCCGGGGCGCCAACAACCAGAAGAATCGGTTCCGCACCAA
CCCGAACGACCCCCGCGTCAAGCACCTCAAGTACATCCAGACGGCCAGTG
GCTCCAAGCTGATCACGTCTGGCTGGTGGGGAAGCGCCCGCCACATCAAC
TACCTGGGCGACTGGGTCATGTCGTGGTCATACTGCCTGCCTACGGGCAT
TGCCGGCTACGCTATTATTCAGACTATCAACCCGGCCACCGGGGACCTGC
AGAAGCAGGCAGTGCAGACCCCCGAGAGCCGGGGCTGGGGAATGATCTTT
ACTTACTTCTTCCTGGTGTACTTTGGCACGCTGCTGATCCACCGTGAGCA
GCGGGACGAGGAGAAGTGCAGGCGCAAGTATGGAGCCGACTGGGACCGGT
ATACGTCGTTGGTCCGAAGCCGGATCATTCCTGGCATTTACTGAATGGCT
CCCAAGAAGGACTCCAAGACCAAGGTCCGGGTGCAGCCCGTTCCAGAGAA
ACGCGGCTATGAATTCGGAGGCCCTCTCGGTGCGTTCGGGATCGTGTTTG
GTCTGCCCGTGCTGGTTTACAGCTTCACCTTCCTGTGTAACGATGTCTCC
GGCTGCCCGGCACCTTCGTTACTACACCCTTCTACCGTGACGCTTGACCA
ATTGAAGGCAGAGGTTGGCTGGCCCAAGGGAGGTTTTGCGGATTTTTACG
ACACAAGCGTGACACTCTGGGTCTTGGGCTATTATCTGCTTAGCTTGGCG
ATGTACGTATTCCTGCCTGGCCAGGAGGTCGAGGGCACCGAATTGGCATG
TGGAGGAAGATTGCCCTACAAGTTCAATGCTTTTCTGTCGGCCGTCCTGA
TCCTCTCCGGCTGTGCGACGGGCACTTACATCTACGGCGCGGACTTTGCT
GTCTGGACTTTTCTCTGGGACAACTATCTGCAGGTAATCACCGCCAACCT
GGTGATCTGTACTGTCATCTCCATCTTCGTCTATGCGAAGAGCTTCACTG
TTCCTGCCCCTGGGCAGCCCAACCCTGAGCTCCGCCAGCTAGCTCCGGGT
GGCCACACTGGCAACGCGTTGTATGATTTCTTCATTGGCAGAGAGCTGAA
CCCCCGGGTACGCCTGCCAATTCCCTTCGTCAGCGAAGCTTCGCGCACGA
TCGATATCAAGTCCTGGCTCGAAATGCGCCCCGGCTTGCTGGGGTGGATC
ATCCTGAACTTGTCGAACATTGCCCGCCAGTACCGCACCTACGGCTACAT
CACGGACTCGATCGTCATCTCGACTGCGTTCCAGGCGTTCTACGTCCTGG
ATGGCCTGTACATGGAGCCTGCCCTGCTGACTACTATGGACATTATTATG
GACGGCTTCGGGTTCATGCTCTCGTTTGGCGATCTCGTCTGGGTCCCTTT
TATCTACAACTTCCAGACTCGCTACCTGGCCGTCTTTCCGTATGAGCTGG
GCTTCAATGGCATTCTGCTCGTCCTGGCCGTTACCGCTGTGGGCTACTCG
ATCTTCCGGGGCGCCAACAACCAGAAGAATCGGTTCCGCACCAACCCGAA
CGACCCCCGCGTCAAGCACCTCAAGTACATCCAGACGGCCAGTGGCTCCA
AGCTGATCACGTCTGGCTGGTGGGGAAGCGCCCGCCACATCAACTACCTG
GGCGACTGGGTCATGTCGTGGTCATACTGCCTGCCTACGGGCATTGCCGG
CTACGCTATTATTCAGACTATCAACCCGGCCACCGGGGACCTGCAGAAGC
AGGCAGTGCAGACCCCCGAGAGCCGGGGCTGGGGAATGATCTTTACTTAC
TTCTTCCTGGTGTACTTTGGCACGCTGCTGATCCACCGTGAGCAGCGGGA
CGAGGAGAAGTGCAGGCGCAAGTATGGAGCCGACTGGGACCGGTATACGT
CGTTGGTCCGAAGCCGGATCATTCCTGGCATTTACTGAATGGCTCCCAAG
AAGGACTCCAAGACCAAGGTCCGGGTGCAGCCCGTTCCAGAGAAACGCGG
CTATGAATTCGGAGGCCCTCTCGGTGCGTTCGGGATCGTGTTTGGTCTGC
CCGTGCTGGTTTACAGCTTCACCTTCCTGTGTAACGATGTCTCCGGCTGC
CCGGCACCTTCGTTACTACACCCTTCTACCGTGACGCTTGACCAATTGAA
GGCAGAGGTTGGCTGGCCCAAGGGAGGTTTTGCGGATTTTTACGACACAA
GCGTGACACTCTGGGTCTTGGGCTATTATCTGCTTAGCTTGGCGATGTAC
GTATTCCTGCCTGGCCAGGAGGTCGAGGGCACCGAATTGGCATGTGGAGG
AAGATTGCCCTACAAGTTCAATGCTTTTCTGTCGGCCGTCCTGATCCTCT
CCGGCTGTGCGACGGGCACTTACATCTACGGCGCGGACTTTGCTGTCTGG
ACTTTTCTCTGGGACAACTATCTGCAGGTAATCACCGCCAACCTGGTGAT
CTGTACTGTCATCTCCATCTTCGTCTATGCGAAGAGCTTCACTGTTCCTG
CCCCTGGGCAGCCCAACCCTGAGCTCCGCCAGCTAGCTCCGGGTGGCCAC
ACTGGCAACGCGTTGTATGATTTCTTCATTGGCAGAGAGCTGAACCCCCG
GGTACGCCTGCCAATTCCCTTCGTCAGCGAAGCTTCGCGCACGATCGATA
TCAAGTCCTGGCTCGAAATGCGCCCCGGCTTGCTGGGGTGGATCATCCTG
AACTTGTCGAACATTGCCCGCCAGTACCGCACCTACGGCTACATCACGGA
CTCGATCGTCATCTCGACTGCGTTCCAGGCGTTCTACGTCCTGGATGGCC
TGTACATGGAGCCTGCCCTGCTGACTACTATGGACATTATTATGGACGGC
TTCGGGTTCATGCTCTCGTTTGGCGATCTCGTCTGGGTCCCTTTTATCTA
CAACTTCCAGACTCGCTACCTGGCCGTCTTTCCGTATGAGCTGGGCTTCA
ATGGCATTCTGCTCGTCCTGGCCGTTACCGCTGTGGGCTACTCGATCTTC
CGGGGCGCCAACAACCAGAAGAATCGGTTCCGCACCAACCCGAACGACCC
CCGCGTCAAGCACCTCAAGTACATCCAGACGGCCAGTGGCTCCAAGCTGA
TCACGTCTGGCTGGTGGGGAAGCGCCCGCCACATCAACTACCTGGGCGAC
TGGGTCATGTCGTGGTCATACTGCCTGCCTACGGGCATTGCCGGCTACGC
TATTATTCAGACTATCAACCCGGCCACCGGGGACCTGCAGAAGCAGGCAG
TGCAGACCCCCGAGAGCCGGGGCTGGGGAATGATCTTTACTTACTTCTTC
CTGGTGTACTTTGGCACGCTGCTGATCCACCGTGAGCAGCGGGACGAGGA
GAAGTGCAGGCGCAAGTATGGAGCCGACTGGGACCGGTATACGTCGTTGG
TCCGAAGCCGGATCATTCCTGGCATTTACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016126 | sterol biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR001171 |
| InterPro | IPR018083 |
| PFAM | PF01222 |
Properties
| Property Name | Value |
|---|
| Product | c-5 sterol desaturase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000166 | supercontig | MCQH01000166:86142..87736 + |
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