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ATCC10864_006296-T1, ATCC10864_006296-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006296-T1
Unique NameATCC10864_006296-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:87824..89495-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006296-T1 ID=ATCC10864_006296-T1|Name=ATCC10864_006296-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1672bp|location=Sequence derived from alignment at MCQH01000166:87824..89495- (Aspergillus niger ATCC 10864)
ATGGAACGACAAAAAGGAGGGGATGCTGGGGATGGTGCTGCCCTTGCGGA
GAGAATTGCCAGACTCGTGCACGCTCACTTTGATGGTTTGCCGGCACGCA
GTAAACCTATTCTACGGGATGATGGGACGAGGGAGTGGATTCCTATGTGT
GGGGTTGTGGTGGTGAGGGGTGTGTATATCCTTTCTTTACACTATCTAAG
GAATATATGGAGAGGTACTATGGTTGGGTGTATACTGGCTTACGATATGT
TGATGTAGATGTATCTGAGGCAAACGGGGAGGAAGAGTATGAGGGAGGAA
AAGAAGAATTAACCTGTGTGGCTGTTACGTATGTACACCAACCACTATCT
ACCCTATATAATCACAGATGTATCTAGTAAATACTAAAGCATCCAGCTCC
GGCGCAAAATGCCTCCCTACCACGCAACTGCCAACCAGCACCGGTCTGGT
CCTCCACGACTGGCACGCCGAGATCCTGGCCCTCCGCGCATTCAATTACT
GGCTGTTGAGTGAGATCCGCGCATTGATAGATCATGAGAATCAACAATCT
TCATCACCTTCTACACCCAAGCCCTCACCCTTCATTCGCCGCCGCCAACC
CCCCAACAACAACCCACCCTTCGAACTCGGCCCCTCCCTAAAAATCTACC
TCTACTGCACCACCGCCCCCTGCGGCGACGCAAGCATGGAACTCACCATG
GCAGCGCAAGACGACCCCACTCCATGGGAGATATCCCCCTCAGAAGAAGA
AGAGGCCGGTCTCCTCTCCGGCCGCGCCAACTTCTCCCAGTTAGGTATTG
TCCGCCGCAAGCCCGCGCGTGCAGACGCCCCATCCACGAAAAGCAAGTCC
TGCTCGGACAAGCTTGCCCTGCGGCAGGTGTCGTCTCTCTTGTCCAGGGG
TATGAGTCTGCTGGTGGCTGTCACGGAGAATGCGTATCTGGCGGGCGTGG
TGATGCCCCGCGAGGAGGTGAGTGAGAGTGGGTGTATCAGGGCGTGGGGG
GTGGATGGGAGGATGGGGCCTTTATTATCGAGGTTTGAAGAAGGAGGAGG
GGGTGGGTACGGGTATCATCCGTTTAAGGTTCTCTCTGTCGATACAGAGG
TCGTGGAGGAGTTGTGGGCGTTTGGCAAACCGAAGAGCAAGGAGGCCGGG
ATGAAGTGTAAGCCGGGGAATATCTCGGCTGTTTGGACGGCTGCGCCGGT
TCTTGGGGGTGCTTCTGGTGGTGGGGTGGATCGCTATGCGGCGGAGAATG
GGGCGAAGCAGTTGGCTAAATTGAGTGGTTCGTGGACTGGGTTGTATGAG
ACGATCATAGGTGGTATGAAGCAGGGGTATAAGGCGTCGGTGCCGGTGGG
GAAGGGCGCGTCGGCGCTGTCGAGGGCGAAGATGTGGGGGGCGTTGAGGG
GGTTGTTGGATGGTGGTGATGGTGATGGTTCTGCGGGAGAGGGACAGCAG
GTGGTTAGGGCAGCATCGTATAAGGAGTTTAAGAGGGCTGCGCTTGAGAC
GCCTGCAGGCAAGGCGCGGGAACGGGCTATGTTGGAGGCGAAGAAGGTGC
TGGTGCCGTGGGTGCCGAATAATGGGGATGATGAATGGGGCTTGGAGGTG
TTGGTGGATCATAAGGGGAAGAAGAGAAAGCGTGATGACATTAAAAAGAG
TAAAGATGCCCAATCTAGCTAA
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Coding sequence (CDS) from alignment at MCQH01000166:87824..89495-

>ATCC10864_006296-T1 ID=ATCC10864_006296-T1|Name=ATCC10864_006296-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4545bp|location=Sequence derived from alignment at MCQH01000166:87824..89495- (Aspergillus niger ATCC 10864)
CTCCGGCGCAAAATGCCTCCCTACCACGCAACTGCCAACCAGCACCGGTC
TGGTCCTCCACGACTGGCACGCCGAGATCCTGGCCCTCCGCGCATTCAAT
TACTGGCTGTTGAGTGAGATCCGCGCATTGATAGATCATGAGAATCAACA
ATCTTCATCACCTTCTACACCCAAGCCCTCACCCTTCATTCGCCGCCGCC
AACCCCCCAACAACAACCCACCCTTCGAACTCGGCCCCTCCCTAAAAATC
TACCTCTACTGCACCACCGCCCCCTGCGGCGACGCAAGCATGGAACTCAC
CATGGCAGCGCAAGACGACCCCACTCCATGGGAGATATCCCCCTCAGAAG
AAGAAGAGGCCGGTCTCCTCTCCGGCCGCGCCAACTTCTCCCAGTTAGGT
ATTGTCCGCCGCAAGCCCGCGCGTGCAGACGCCCCATCCACGAAAAGCAA
GTCCTGCTCGGACAAGCTTGCCCTGCGGCAGGTGTCGTCTCTCTTGTCCA
GGGGTATGAGTCTGCTGGTGGCTGTCACGGAGAATGCGTATCTGGCGGGC
GTGGTGATGCCCCGCGAGGAGGTGAGTGAGAGTGGGTGTATCAGGGCGTG
GGGGGTGGATGGGAGGATGGGGCCTTTATTATCGAGGTTTGAAGAAGGAG
GAGGGGGTGGGTACGGGTATCATCCGTTTAAGGTTCTCTCTGTCGATACA
GAGGTCGTGGAGGAGTTGTGGGCGTTTGGCAAACCGAAGAGCAAGGAGGC
CGGGATGAAGTGTAAGCCGGGGAATATCTCGGCTGTTTGGACGGCTGCGC
CGGTTCTTGGGGGTGCTTCTGGTGGTGGGGTGGATCGCTATGCGGCGGAG
AATGGGGCGAAGCAGTTGGCTAAATTGAGTGGTTCGTGGACTGGGTTGTA
TGAGACGATCATAGGTGGTATGAAGCAGGGGTATAAGGCGTCGGTGCCGG
TGGGGAAGGGCGCGTCGGCGCTGTCGAGGGCGAAGATGTGGGGGGCGTTG
AGGGGGTTGTTGGATGGTGGTGATGGTGATGGTTCTGCGGGAGAGGGACA
GCAGGTGGTTAGGGCAGCATCGTATAAGGAGTTTAAGAGGGCTGCGCTTG
AGACGCCTGCAGGCAAGGCGCGGGAACGGGCTATGTTGGAGGCGAAGAAG
GTGCTGGTGCCGTGGGTGCCGAATAATGGGGATGATGAATGGGGCTTGGA
GGTGTTGGTGGATCATAAGGGGAAGAAGAGAAAGCGTGATGACATTAAAA
AGAGTAAAGATGCCCAATCTAGCTAAATGTATCTGAGGCAAACGGGGAGG
AAGAGTATGAGGGAGGAAAAGAAGAATTAACCTGTGTGGCTGTTACATGG
AACGACAAAAAGGAGGGGATGCTGGGGATGGTGCTGCCCTTGCGGAGAGA
ATTGCCAGACTCGTGCACGCTCACTTTGATGGTTTGCCGGCACGCAGTAA
ACCTATTCTACGGGATGATGGGACGAGGGAGTGGATTCCTATGTGTGGGG
TTGTGGTGGTGAGGGCTCCGGCGCAAAATGCCTCCCTACCACGCAACTGC
CAACCAGCACCGGTCTGGTCCTCCACGACTGGCACGCCGAGATCCTGGCC
CTCCGCGCATTCAATTACTGGCTGTTGAGTGAGATCCGCGCATTGATAGA
TCATGAGAATCAACAATCTTCATCACCTTCTACACCCAAGCCCTCACCCT
TCATTCGCCGCCGCCAACCCCCCAACAACAACCCACCCTTCGAACTCGGC
CCCTCCCTAAAAATCTACCTCTACTGCACCACCGCCCCCTGCGGCGACGC
AAGCATGGAACTCACCATGGCAGCGCAAGACGACCCCACTCCATGGGAGA
TATCCCCCTCAGAAGAAGAAGAGGCCGGTCTCCTCTCCGGCCGCGCCAAC
TTCTCCCAGTTAGGTATTGTCCGCCGCAAGCCCGCGCGTGCAGACGCCCC
ATCCACGAAAAGCAAGTCCTGCTCGGACAAGCTTGCCCTGCGGCAGGTGT
CGTCTCTCTTGTCCAGGGGTATGAGTCTGCTGGTGGCTGTCACGGAGAAT
GCGTATCTGGCGGGCGTGGTGATGCCCCGCGAGGAGGTGAGTGAGAGTGG
GTGTATCAGGGCGTGGGGGGTGGATGGGAGGATGGGGCCTTTATTATCGA
GGTTTGAAGAAGGAGGAGGGGGTGGGTACGGGTATCATCCGTTTAAGGTT
CTCTCTGTCGATACAGAGGTCGTGGAGGAGTTGTGGGCGTTTGGCAAACC
GAAGAGCAAGGAGGCCGGGATGAAGTGTAAGCCGGGGAATATCTCGGCTG
TTTGGACGGCTGCGCCGGTTCTTGGGGGTGCTTCTGGTGGTGGGGTGGAT
CGCTATGCGGCGGAGAATGGGGCGAAGCAGTTGGCTAAATTGAGTGGTTC
GTGGACTGGGTTGTATGAGACGATCATAGGTGGTATGAAGCAGGGGTATA
AGGCGTCGGTGCCGGTGGGGAAGGGCGCGTCGGCGCTGTCGAGGGCGAAG
ATGTGGGGGGCGTTGAGGGGGTTGTTGGATGGTGGTGATGGTGATGGTTC
TGCGGGAGAGGGACAGCAGGTGGTTAGGGCAGCATCGTATAAGGAGTTTA
AGAGGGCTGCGCTTGAGACGCCTGCAGGCAAGGCGCGGGAACGGGCTATG
TTGGAGGCGAAGAAGGTGCTGGTGCCGTGGGTGCCGAATAATGGGGATGA
TGAATGGGGCTTGGAGGTGTTGGTGGATCATAAGGGGAAGAAGAGAAAGC
GTGATGACATTAAAAAGAGTAAAGATGCCCAATCTAGCTAAATGTATCTG
AGGCAAACGGGGAGGAAGAGTATGAGGGAGGAAAAGAAGAATTAACCTGT
GTGGCTGTTACATGGAACGACAAAAAGGAGGGGATGCTGGGGATGGTGCT
GCCCTTGCGGAGAGAATTGCCAGACTCGTGCACGCTCACTTTGATGGTTT
GCCGGCACGCAGTAAACCTATTCTACGGGATGATGGGACGAGGGAGTGGA
TTCCTATGTGTGGGGTTGTGGTGGTGAGGGCTCCGGCGCAAAATGCCTCC
CTACCACGCAACTGCCAACCAGCACCGGTCTGGTCCTCCACGACTGGCAC
GCCGAGATCCTGGCCCTCCGCGCATTCAATTACTGGCTGTTGAGTGAGAT
CCGCGCATTGATAGATCATGAGAATCAACAATCTTCATCACCTTCTACAC
CCAAGCCCTCACCCTTCATTCGCCGCCGCCAACCCCCCAACAACAACCCA
CCCTTCGAACTCGGCCCCTCCCTAAAAATCTACCTCTACTGCACCACCGC
CCCCTGCGGCGACGCAAGCATGGAACTCACCATGGCAGCGCAAGACGACC
CCACTCCATGGGAGATATCCCCCTCAGAAGAAGAAGAGGCCGGTCTCCTC
TCCGGCCGCGCCAACTTCTCCCAGTTAGGTATTGTCCGCCGCAAGCCCGC
GCGTGCAGACGCCCCATCCACGAAAAGCAAGTCCTGCTCGGACAAGCTTG
CCCTGCGGCAGGTGTCGTCTCTCTTGTCCAGGGGTATGAGTCTGCTGGTG
GCTGTCACGGAGAATGCGTATCTGGCGGGCGTGGTGATGCCCCGCGAGGA
GGTGAGTGAGAGTGGGTGTATCAGGGCGTGGGGGGTGGATGGGAGGATGG
GGCCTTTATTATCGAGGTTTGAAGAAGGAGGAGGGGGTGGGTACGGGTAT
CATCCGTTTAAGGTTCTCTCTGTCGATACAGAGGTCGTGGAGGAGTTGTG
GGCGTTTGGCAAACCGAAGAGCAAGGAGGCCGGGATGAAGTGTAAGCCGG
GGAATATCTCGGCTGTTTGGACGGCTGCGCCGGTTCTTGGGGGTGCTTCT
GGTGGTGGGGTGGATCGCTATGCGGCGGAGAATGGGGCGAAGCAGTTGGC
TAAATTGAGTGGTTCGTGGACTGGGTTGTATGAGACGATCATAGGTGGTA
TGAAGCAGGGGTATAAGGCGTCGGTGCCGGTGGGGAAGGGCGCGTCGGCG
CTGTCGAGGGCGAAGATGTGGGGGGCGTTGAGGGGGTTGTTGGATGGTGG
TGATGGTGATGGTTCTGCGGGAGAGGGACAGCAGGTGGTTAGGGCAGCAT
CGTATAAGGAGTTTAAGAGGGCTGCGCTTGAGACGCCTGCAGGCAAGGCG
CGGGAACGGGCTATGTTGGAGGCGAAGAAGGTGCTGGTGCCGTGGGTGCC
GAATAATGGGGATGATGAATGGGGCTTGGAGGTGTTGGTGGATCATAAGG
GGAAGAAGAGAAAGCGTGATGACATTAAAAAGAGTAAAGATGCCCAATCT
AGCTAAATGTATCTGAGGCAAACGGGGAGGAAGAGTATGAGGGAGGAAAA
GAAGAATTAACCTGTGTGGCTGTTACATGGAACGACAAAAAGGAGGGGAT
GCTGGGGATGGTGCTGCCCTTGCGGAGAGAATTGCCAGACTCGTGCACGC
TCACTTTGATGGTTTGCCGGCACGCAGTAAACCTATTCTACGGGATGATG
GGACGAGGGAGTGGATTCCTATGTGTGGGGTTGTGGTGGTGAGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0002100tRNA wobble adenosine to inosine editing
Vocabulary: Molecular Function
TermDefinition
GO:0008251tRNA-specific adenosine deaminase activity
GO:0004000adenosine deaminase activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006296ATCC10864_006296Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006296-T1ATCC10864_006296-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006296-T1.cdsATCC10864_006296-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006296-T1.exon3ATCC10864_006296-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006296-T1.exon2ATCC10864_006296-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006296-T1.exon1ATCC10864_006296-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002466
PFAMPF02137
InterProIPR042935
Properties
Property NameValue
NoteBUSCO:EOG09263CG2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:87824..89495 -
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