You are here

ATCC10864_006311-T1, ATCC10864_006311-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006311-T1
Unique NameATCC10864_006311-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:130910..131997+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006311-T1 ID=ATCC10864_006311-T1|Name=ATCC10864_006311-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1088bp|location=Sequence derived from alignment at MCQH01000166:130910..131997+ (Aspergillus niger ATCC 10864)
ATGTCGTTTACTTGGCCGTGGCATTTCACGTCTCTCACAGACGCTGAGAA GCAGCAACGCCGGGAGCTTCTTGATTTACGTGGACTCTACGCGCAGTGCT CCGTGTTGGTTGCTCTTGTTCTGGTTCGAGTATATAAGAAGTCCTTTAGC GAAGCCCCTGGCTCCGAAAAGCCAGCCGAGAGGCGCTCGCGGCGAAAGAA TTCCGAAAAATCATGGTTGGATACGCCCCCAATTGCTGGCTGGATGGAGA CCCGAAGACAATACATTGTCTGTCTCATCTGGCTTGGCTGGCTTCTGAGT CTTTGCATCTGGAATTCTGGTGAAGGTGGGTCAATAATTTCTGTCACAAT TCTTGATACTACTAGTACCCGAGCTTGGGGCATTGGACAACAGGATTACA TTTGTCTGGGCTCCGATTTGCCAAAATCTACACTTTGTGTTCATCTAGGC TCCCGCTTAACTACAACAATCCTGTCTTCTATTCTTCTATCACCCACATC GTGGAGACGAAAGCTAAGCCATTGTTGGTGTAAACAGATTATCTCCACTT CACCAAAGCTCTAGCCCATGTCAGCCTCTCCCAGCTCCCCTTGCAGGTGC TCATGTCACCGTCCTTGTACATGAGTCCATCACCAGGATCACCGTCCGTC GTGTCGGTTATCACATCCGTTCCACAACCGACCATTAACGCCTACCATCG TCTATTTGGTCGAATCGTTCTTGCGCCGCTGCTCATTGCCCACGCTTTCA TGTACGATTCTTTCTTCCTGCAGTCGAGCTACCCTGGCTTCAGCTCGCTC TTTGCGAAGCGTATCTGGGATTCTGATGTTCAGTGGGGTGTCGCTGCAGC CACCATGGTGGGCGCGGTCGCTCTCTTTGCGCGACCGGCAGCCATGCCTA GCTGGGTACGCTGGTTGAAACCGACTTCTGCCAAGTCCAGACAGCAGGTG TTTTACCTTGTGCATGTGTCCATCGTGGGAGCCCTGGAACTTGCGGCGTT CTGCCATGTTTCGGTGGCGCGCACCTATATCCTTGAGTCTTTTGCGAGCT CCGCGATCAATTTCGCCTGTTGCTATATGATGCAATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000166:130910..131997+

>ATCC10864_006311-T1 ID=ATCC10864_006311-T1|Name=ATCC10864_006311-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1752bp|location=Sequence derived from alignment at MCQH01000166:130910..131997+ (Aspergillus niger ATCC 10864)
ATGTCGTTTACTTGGCCGTGGCATTTCACGTCTCTCACAGACGCTGAGAA
GCAGCAACGCCGGGAGCTTCTTGATTTACGTGGACTCTACGCGCAGTGCT
CCGTGTTGGTTGCTCTTGTTCTGGTTCGAGTATATAAGAAGTCCTTTAGC
GAAGCCCCTGGCTCCGAAAAGCCAGCCGAGAGGCGCTCGCGGCGAAAGAA
TTCCGAAAAATCATGGTTGGATACGCCCCCAATTGCTGGCTGGATGGAGA
CCCGAAGACAATACATTGTCTGTCTCATCTGGCTTGGCTGGCTTCTGAGT
CTTTGCATCTGGAATTCTGGTGAAGATTATCTCCACTTCACCAAAGCTCT
AGCCCATGTCAGCCTCTCCCAGCTCCCCTTGCAGGTGCTCATGTCACCGT
CCTTGTACATGAGTCCATCACCAGGATCACCGTCCGTCGTGTCGGTTATC
ACATCCGTTCCACAACCGACCATTAACGCCTACCATCGTCTATTTGGTCG
AATCGTTCTTGCGCCGCTGCTCATTGCCCACGCTTTCATGTACGATTCTT
TCTTCCTGCAGTCGAGCTACCCTGGCTTCAGCTCGCTCTTTGCGAAGCGT
ATCTGGGATTCTGATGTTCAGTGGGGTGTCGCTGCAGCCACCATGGTGGG
CGCGGTCGCTCTCTTTGCGCGACCGGCAGCCATGCCTAGCTGGGTACGCT
GGTTGAAACCGACTTCTGCCAAGTCCAGACAGCAGGTGTTTTACCTTGTG
CATGTGTCCATCGTGGGAGCCCTGGAACTTGCGGCGTTCTGCCATGTTTC
GGTGGCGCGCACCTATATCCTTGAGTCTTTTGCGAGCTCCGCGATCAATT
TCGCCTGTTGCTATATGATGCAATAGATGTCGTTTACTTGGCCGTGGCAT
TTCACGTCTCTCACAGACGCTGAGAAGCAGCAACGCCGGGAGCTTCTTGA
TTTACGTGGACTCTACGCGCAGTGCTCCGTGTTGGTTGCTCTTGTTCTGG
TTCGAGTATATAAGAAGTCCTTTAGCGAAGCCCCTGGCTCCGAAAAGCCA
GCCGAGAGGCGCTCGCGGCGAAAGAATTCCGAAAAATCATGGTTGGATAC
GCCCCCAATTGCTGGCTGGATGGAGACCCGAAGACAATACATTGTCTGTC
TCATCTGGCTTGGCTGGCTTCTGAGTCTTTGCATCTGGAATTCTGGTGAA
GATTATCTCCACTTCACCAAAGCTCTAGCCCATGTCAGCCTCTCCCAGCT
CCCCTTGCAGGTGCTCATGTCACCGTCCTTGTACATGAGTCCATCACCAG
GATCACCGTCCGTCGTGTCGGTTATCACATCCGTTCCACAACCGACCATT
AACGCCTACCATCGTCTATTTGGTCGAATCGTTCTTGCGCCGCTGCTCAT
TGCCCACGCTTTCATGTACGATTCTTTCTTCCTGCAGTCGAGCTACCCTG
GCTTCAGCTCGCTCTTTGCGAAGCGTATCTGGGATTCTGATGTTCAGTGG
GGTGTCGCTGCAGCCACCATGGTGGGCGCGGTCGCTCTCTTTGCGCGACC
GGCAGCCATGCCTAGCTGGGTACGCTGGTTGAAACCGACTTCTGCCAAGT
CCAGACAGCAGGTGTTTTACCTTGTGCATGTGTCCATCGTGGGAGCCCTG
GAACTTGCGGCGTTCTGCCATGTTTCGGTGGCGCGCACCTATATCCTTGA
GTCTTTTGCGAGCTCCGCGATCAATTTCGCCTGTTGCTATATGATGCAAT
AG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006311ATCC10864_006311Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006311-T1.exon1ATCC10864_006311-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006311-T1.exon2ATCC10864_006311-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006311-T1.cdsATCC10864_006311-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006311-T1ATCC10864_006311-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01794
InterProIPR013130
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:130910..131997 +