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ATCC10864_006315-T1, ATCC10864_006315-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006315-T1
Unique NameATCC10864_006315-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:141842..143234-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006315-T1 ID=ATCC10864_006315-T1|Name=ATCC10864_006315-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1393bp|location=Sequence derived from alignment at MCQH01000166:141842..143234- (Aspergillus niger ATCC 10864)
ATGAGTCTCGCACGTCCGGCCCGATGCCTCTTCTGCAGCTTCTCGCGTGC
GGCCTCCGCCGGCCCTCGCGTGCCTAGTCGCCAGTTCCACTTGTCATCGA
TACAGCTCTCCGATCGGAAACCGAAGGTCCCTGAAGTCAACAAGGCCCCC
GAAGGAAAGACCCTGGATGAAATTTACCGGGAAGTGAAGCTCGACGACTT
CAAGCACTACACCGAGGAGGAAAAGGCCGCCCTCCGGGAAGAATACTCGC
CCGAACAGATCGCCGCCATTGAGGCCGGTGAGAAGGCCATTGACCCCAAA
GACCTGGCTGAACAGTTCCGTCTTCGTCGGGATCCCATGAGATTGAAGTA
TCTCGATGATTTCTCGGTCATTGAACCCGGCGTGGACAAGCACGTTCGCG
CCCCCAAGTCCAACTCCGACTACAACGCGACATTCAAGACCGAGGATGAT
TTCATGGAAGACTTTGCCCGCTTCTTCGCCGAATCATCGGAGGATCCCCA
GCCGGCAGATTTCGTACGATTCCTCGAGACCACCCGGGTGACTCACGGCA
AGGAGGAGAACGAGCTCAACGGACACAGCGCGCTCGCACCCAATCTCTTG
AACGATGGGGAGACCTTGGAACACATGGGCGACGAGGTGGTGGCGAGGCC
GCAATACCGCACAAAGACTGGAGAGCTTACGTTCTTGAACCCCGACGAAC
CCAACGAGGCGGAGAAGAGACTTTTCCAGGTCACGGGCTTCGGTAGAGAT
TACCTCAAGTCTCTGTACATCAAGGACCTCGTTATTCGCCGTGTCAGCAA
CCAGACTCGACTGGGTAAGGTCCCGAGTATGTCCGTCGTTACGGTCGCCG
GTAACCAGAACGGTCTTATGGGTATCGGAATCGCCAAGTCCGATGAAATC
ATCGATGCCTGCCAACAAGCTCGCGCTCGGGCTGTCAAGAACATGCAACC
TGTGCCGCGCTACGAGAAGCGGACCATCTTCGGTGACGTCGAGGGCAAGG
TCGGAGCTGTGCAGTTGAAGTTGATGCACCGTCCCCCAGGTACGATTATC
CGAACCCTGAAATGTTATTTCAACGCTAATGCTTGATGTTCCCACAGGTT
TCGGTCTCCGCTGCCAGCACCTGATCTTTGAAATGTGCCGTGCGGCCGGT
ATTCACGATATCGCAGCCCGGGTCAACCGCTCCAGAAACCCCATGAACAC
AGTCAAGGCAGCCTACGAGGCGCTCATGAGCCAGCGCAACCCCGAGGATA
TTGCCCGTGCCCGGGGTAAGAAGATGGTCGATGTACGGGGAGTGTACTAC
TCCGGAAGAGGCATTCAACAGGACATGTATGCTCGCCCGGTTCGTGATCG
GGAACATCGTGAGCGGCCGTCCCGGGAAGCTCGGCGAGCTTGA
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Coding sequence (CDS) from alignment at MCQH01000166:141842..143234-

>ATCC10864_006315-T1 ID=ATCC10864_006315-T1|Name=ATCC10864_006315-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2670bp|location=Sequence derived from alignment at MCQH01000166:141842..143234- (Aspergillus niger ATCC 10864)
GTTTCGGTCTCCGCTGCCAGCACCTGATCTTTGAAATGTGCCGTGCGGCC
GGTATTCACGATATCGCAGCCCGGGTCAACCGCTCCAGAAACCCCATGAA
CACAGTCAAGGCAGCCTACGAGGCGCTCATGAGCCAGCGCAACCCCGAGG
ATATTGCCCGTGCCCGGGGTAAGAAGATGGTCGATGTACGGGGAGTGTAC
TACTCCGGAAGAGGCATTCAACAGGACATGTATGCTCGCCCGGTTCGTGA
TCGGGAACATCGTGAGCGGCCGTCCCGGGAAGCTCGGCGAGCTTGAATGA
GTCTCGCACGTCCGGCCCGATGCCTCTTCTGCAGCTTCTCGCGTGCGGCC
TCCGCCGGCCCTCGCGTGCCTAGTCGCCAGTTCCACTTGTCATCGATACA
GCTCTCCGATCGGAAACCGAAGGTCCCTGAAGTCAACAAGGCCCCCGAAG
GAAAGACCCTGGATGAAATTTACCGGGAAGTGAAGCTCGACGACTTCAAG
CACTACACCGAGGAGGAAAAGGCCGCCCTCCGGGAAGAATACTCGCCCGA
ACAGATCGCCGCCATTGAGGCCGGTGAGAAGGCCATTGACCCCAAAGACC
TGGCTGAACAGTTCCGTCTTCGTCGGGATCCCATGAGATTGAAGTATCTC
GATGATTTCTCGGTCATTGAACCCGGCGTGGACAAGCACGTTCGCGCCCC
CAAGTCCAACTCCGACTACAACGCGACATTCAAGACCGAGGATGATTTCA
TGGAAGACTTTGCCCGCTTCTTCGCCGAATCATCGGAGGATCCCCAGCCG
GCAGATTTCGTACGATTCCTCGAGACCACCCGGGTGACTCACGGCAAGGA
GGAGAACGAGCTCAACGGACACAGCGCGCTCGCACCCAATCTCTTGAACG
ATGGGGAGACCTTGGAACACATGGGCGACGAGGTGGTGGCGAGGCCGCAA
TACCGCACAAAGACTGGAGAGCTTACGTTCTTGAACCCCGACGAACCCAA
CGAGGCGGAGAAGAGACTTTTCCAGGTCACGGGCTTCGGTAGAGATTACC
TCAAGTCTCTGTACATCAAGGACCTCGTTATTCGCCGTGTCAGCAACCAG
ACTCGACTGGGTAAGGTCCCGAGTATGTCCGTCGTTACGGTCGCCGGTAA
CCAGAACGGTCTTATGGGTATCGGAATCGCCAAGTCCGATGAAATCATCG
ATGCCTGCCAACAAGCTCGCGCTCGGGCTGTCAAGAACATGCAACCTGTG
CCGCGCTACGAGAAGCGGACCATCTTCGGTGACGTCGAGGGCAAGGTCGG
AGCTGTGCAGTTGAAGTTGATGCACCGTCCCCCAGGTTTCGGTCTCCGCT
GCCAGCACCTGATCTTTGAAATGTGCCGTGCGGCCGGTATTCACGATATC
GCAGCCCGGGTCAACCGCTCCAGAAACCCCATGAACACAGTCAAGGCAGC
CTACGAGGCGCTCATGAGCCAGCGCAACCCCGAGGATATTGCCCGTGCCC
GGGGTAAGAAGATGGTCGATGTACGGGGAGTGTACTACTCCGGAAGAGGC
ATTCAACAGGACATGTATGCTCGCCCGGTTCGTGATCGGGAACATCGTGA
GCGGCCGTCCCGGGAAGCTCGGCGAGCTTGAATGAGTCTCGCACGTCCGG
CCCGATGCCTCTTCTGCAGCTTCTCGCGTGCGGCCTCCGCCGGCCCTCGC
GTGCCTAGTCGCCAGTTCCACTTGTCATCGATACAGCTCTCCGATCGGAA
ACCGAAGGTCCCTGAAGTCAACAAGGCCCCCGAAGGAAAGACCCTGGATG
AAATTTACCGGGAAGTGAAGCTCGACGACTTCAAGCACTACACCGAGGAG
GAAAAGGCCGCCCTCCGGGAAGAATACTCGCCCGAACAGATCGCCGCCAT
TGAGGCCGGTGAGAAGGCCATTGACCCCAAAGACCTGGCTGAACAGTTCC
GTCTTCGTCGGGATCCCATGAGATTGAAGTATCTCGATGATTTCTCGGTC
ATTGAACCCGGCGTGGACAAGCACGTTCGCGCCCCCAAGTCCAACTCCGA
CTACAACGCGACATTCAAGACCGAGGATGATTTCATGGAAGACTTTGCCC
GCTTCTTCGCCGAATCATCGGAGGATCCCCAGCCGGCAGATTTCGTACGA
TTCCTCGAGACCACCCGGGTGACTCACGGCAAGGAGGAGAACGAGCTCAA
CGGACACAGCGCGCTCGCACCCAATCTCTTGAACGATGGGGAGACCTTGG
AACACATGGGCGACGAGGTGGTGGCGAGGCCGCAATACCGCACAAAGACT
GGAGAGCTTACGTTCTTGAACCCCGACGAACCCAACGAGGCGGAGAAGAG
ACTTTTCCAGGTCACGGGCTTCGGTAGAGATTACCTCAAGTCTCTGTACA
TCAAGGACCTCGTTATTCGCCGTGTCAGCAACCAGACTCGACTGGGTAAG
GTCCCGAGTATGTCCGTCGTTACGGTCGCCGGTAACCAGAACGGTCTTAT
GGGTATCGGAATCGCCAAGTCCGATGAAATCATCGATGCCTGCCAACAAG
CTCGCGCTCGGGCTGTCAAGAACATGCAACCTGTGCCGCGCTACGAGAAG
CGGACCATCTTCGGTGACGTCGAGGGCAAGGTCGGAGCTGTGCAGTTGAA
GTTGATGCACCGTCCCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006315ATCC10864_006315Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006315-T1ATCC10864_006315-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006315-T1.cdsATCC10864_006315-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006315-T1.exon2ATCC10864_006315-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006315-T1.exon1ATCC10864_006315-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000851
InterProIPR014721
InterProIPR020568
InterProIPR013810
PFAMPF00333
InterProIPR005324
PFAMPF03719
Properties
Property NameValue
NoteBUSCO:EOG092634G9
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:141842..143234 -
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