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ATCC10864_006318-T1, ATCC10864_006318-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006318-T1
Unique NameATCC10864_006318-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:147233..148755-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006318-T1 ID=ATCC10864_006318-T1|Name=ATCC10864_006318-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1523bp|location=Sequence derived from alignment at MCQH01000166:147233..148755- (Aspergillus niger ATCC 10864)
ATGGCTTCCCAGACCCCGGCCGTTGTCATGGACAAGTATGCCATTCACCA
TCCCCATATTACACAATACTTGAGCATCCGCTAACTTGCACGTTCTCTCT
GTTCAGCGGTACCGGTTATTCCAAGCTTGGTAGGTCTCCTGATAGCTTCC
ACGTGGAGCTCCGCCGGCAAGCTCCAGGCTGACAAGTCTCCAGGTTTCGC
CGGTAACGACTCGCCCTCTTTCGTCTTTCCCACCGCAATTGCGACCAAAG
CTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCGGTAGACCTCCTGTTGCG
AACAAACCGTCCTTCCTAGCTAGCGGTGGTGGGGCAGGCTCCCATCTATC
CGCGAAGCGTGGTACAGAGGACTTGGACTTCTTCATTGGCGATGAAGCTC
TGGCAGCGGCCAACGGGCCCGGTTATGCGATCAACTACCCCATTCGCCAT
GGTCAGATCGAGAACTGGGATCACATGGAGCGGTTCTGGTCGAATTCCAT
CTTTAAGTACTTGCGCGTCGAGCCGGAGGACCACTACTTCCTCCTCACTG
AGCCGGTAAGACCCCTCGATTCCTTCCAATGGCTCTTCGCGGATGCAATG
CTGATCGGGTGTTGTAAACAAAGCCCTTGAACCCCCCCGAGAACCGTGAG
AACACCGCCGAGATCATGTTCGAGTCTTTCAACTGTGCCGGTCTATACAT
TGCCGTCCAGGCTGTGTTGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGG
TGACCGACCGCTCTCTCACCGGAACGGTCATCGATTCCGGTGACGGTGTC
ACACACGTTATTCCCGTCGCCGAAGGCTACGTCATCGGATCATCTATCAA
GAGTATACCCATTGCCGGTCGCGATATCACCTACTTTGTCCAGAGCTTGC
TCCGTGACCGCGGTGAGCCGGATAGCAGCCTGAAGACGGCTGAGAAGGTC
AAGGAAGAGTACTGCTACGTGTGCCCCGACATCGTCAAGGAATTCGCCCG
CTACGACCGTGAGCCGGACCGCCTGCTTAAGCACACCGTGACTTCGCCCA
ACGGCCGGACCGTGAGCATCGATGTGGGCTACGAACGTTTCCTGGCGCCC
GAGATCTTCTTCAACCCCGAGATTTATTCCTCGGACTTTTTGACCCCCCT
GCCTAATGTCGTCGACGGCGTGATCCAGTCTTCCCCCATCGATGTGAGAA
GGGGTCTTTACAAGAACATTGTGTTGTCCGGTGGATCTACGCTGTACAAG
GACTTTGGACGGCGTCTTCAGCGTGACATCCGTCATCTGGTGGATGCACG
CATTCGGGCGTCGGAGGCGCGCAGCGGAGGCGCCAGAAGTGGTGGACTGG
ACGTGGCGGTTGTGACACACAAGAGACAGCGCCATGGACCGTGGTTCGGA
GGTAGCTTGCTCGGACAGACGCCGGAGTTCCGCAGTTACTGCCACACCAA
GGCAGAGTACGACGAGATTGGTCCTAGTATCGTGCGCCGCTTTGCGCTGT
TGGGAGGCCCTGGCAGTTCGTAA
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Coding sequence (CDS) from alignment at MCQH01000166:147233..148755-

>ATCC10864_006318-T1 ID=ATCC10864_006318-T1|Name=ATCC10864_006318-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5280bp|location=Sequence derived from alignment at MCQH01000166:147233..148755- (Aspergillus niger ATCC 10864)
CCCTTGAACCCCCCCGAGAACCGTGAGAACACCGCCGAGATCATGTTCGA
GTCTTTCAACTGTGCCGGTCTATACATTGCCGTCCAGGCTGTGTTGGCCC
TTGCTGCCTCGTGGACCTCCTCGAAGGTGACCGACCGCTCTCTCACCGGA
ACGGTCATCGATTCCGGTGACGGTGTCACACACGTTATTCCCGTCGCCGA
AGGCTACGTCATCGGATCATCTATCAAGAGTATACCCATTGCCGGTCGCG
ATATCACCTACTTTGTCCAGAGCTTGCTCCGTGACCGCGGTGAGCCGGAT
AGCAGCCTGAAGACGGCTGAGAAGGTCAAGGAAGAGTACTGCTACGTGTG
CCCCGACATCGTCAAGGAATTCGCCCGCTACGACCGTGAGCCGGACCGCC
TGCTTAAGCACACCGTGACTTCGCCCAACGGCCGGACCGTGAGCATCGAT
GTGGGCTACGAACGTTTCCTGGCGCCCGAGATCTTCTTCAACCCCGAGAT
TTATTCCTCGGACTTTTTGACCCCCCTGCCTAATGTCGTCGACGGCGTGA
TCCAGTCTTCCCCCATCGATGTGAGAAGGGGTCTTTACAAGAACATTGTG
TTGTCCGGTGGATCTACGCTGTACAAGGACTTTGGACGGCGTCTTCAGCG
TGACATCCGTCATCTGGTGGATGCACGCATTCGGGCGTCGGAGGCGCGCA
GCGGAGGCGCCAGAAGTGGTGGACTGGACGTGGCGGTTGTGACACACAAG
AGACAGCGCCATGGACCGTGGTTCGGAGGTAGCTTGCTCGGACAGACGCC
GGAGTTCCGCAGTTACTGCCACACCAAGGCAGAGTACGACGAGATTGGTC
CTAGTATCGTGCGCCGCTTTGCGCTGTTGGGAGGCCCTGGCAGTTCGTAA
GTTTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTCCCACCGCAATTGCG
ACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCGGTAGACCTCC
TGTTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGGTGGGGCAGGCTCCC
ATCTATCCGCGAAGCGTGGTACAGAGGACTTGGACTTCTTCATTGGCGAT
GAAGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCGATCAACTACCCCAT
TCGCCATGGTCAGATCGAGAACTGGGATCACATGGAGCGGTTCTGGTCGA
ATTCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGGACCACTACTTCCTC
CTCACTGAGCCGCGGTACCGGTTATTCCAAGCTTGATGGCTTCCCAGACC
CCGGCCGTTGTCATGGACAACCCTTGAACCCCCCCGAGAACCGTGAGAAC
ACCGCCGAGATCATGTTCGAGTCTTTCAACTGTGCCGGTCTATACATTGC
CGTCCAGGCTGTGTTGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGGTGA
CCGACCGCTCTCTCACCGGAACGGTCATCGATTCCGGTGACGGTGTCACA
CACGTTATTCCCGTCGCCGAAGGCTACGTCATCGGATCATCTATCAAGAG
TATACCCATTGCCGGTCGCGATATCACCTACTTTGTCCAGAGCTTGCTCC
GTGACCGCGGTGAGCCGGATAGCAGCCTGAAGACGGCTGAGAAGGTCAAG
GAAGAGTACTGCTACGTGTGCCCCGACATCGTCAAGGAATTCGCCCGCTA
CGACCGTGAGCCGGACCGCCTGCTTAAGCACACCGTGACTTCGCCCAACG
GCCGGACCGTGAGCATCGATGTGGGCTACGAACGTTTCCTGGCGCCCGAG
ATCTTCTTCAACCCCGAGATTTATTCCTCGGACTTTTTGACCCCCCTGCC
TAATGTCGTCGACGGCGTGATCCAGTCTTCCCCCATCGATGTGAGAAGGG
GTCTTTACAAGAACATTGTGTTGTCCGGTGGATCTACGCTGTACAAGGAC
TTTGGACGGCGTCTTCAGCGTGACATCCGTCATCTGGTGGATGCACGCAT
TCGGGCGTCGGAGGCGCGCAGCGGAGGCGCCAGAAGTGGTGGACTGGACG
TGGCGGTTGTGACACACAAGAGACAGCGCCATGGACCGTGGTTCGGAGGT
AGCTTGCTCGGACAGACGCCGGAGTTCCGCAGTTACTGCCACACCAAGGC
AGAGTACGACGAGATTGGTCCTAGTATCGTGCGCCGCTTTGCGCTGTTGG
GAGGCCCTGGCAGTTCGTAAGTTTCGCCGGTAACGACTCGCCCTCTTTCG
TCTTTCCCACCGCAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCC
TCCGCTGCCGGTAGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAG
CGGTGGTGGGGCAGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACT
TGGACTTCTTCATTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGT
TATGCGATCAACTACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCA
CATGGAGCGGTTCTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGC
CGGAGGACCACTACTTCCTCCTCACTGAGCCGCGGTACCGGTTATTCCAA
GCTTGATGGCTTCCCAGACCCCGGCCGTTGTCATGGACAACCCTTGAACC
CCCCCGAGAACCGTGAGAACACCGCCGAGATCATGTTCGAGTCTTTCAAC
TGTGCCGGTCTATACATTGCCGTCCAGGCTGTGTTGGCCCTTGCTGCCTC
GTGGACCTCCTCGAAGGTGACCGACCGCTCTCTCACCGGAACGGTCATCG
ATTCCGGTGACGGTGTCACACACGTTATTCCCGTCGCCGAAGGCTACGTC
ATCGGATCATCTATCAAGAGTATACCCATTGCCGGTCGCGATATCACCTA
CTTTGTCCAGAGCTTGCTCCGTGACCGCGGTGAGCCGGATAGCAGCCTGA
AGACGGCTGAGAAGGTCAAGGAAGAGTACTGCTACGTGTGCCCCGACATC
GTCAAGGAATTCGCCCGCTACGACCGTGAGCCGGACCGCCTGCTTAAGCA
CACCGTGACTTCGCCCAACGGCCGGACCGTGAGCATCGATGTGGGCTACG
AACGTTTCCTGGCGCCCGAGATCTTCTTCAACCCCGAGATTTATTCCTCG
GACTTTTTGACCCCCCTGCCTAATGTCGTCGACGGCGTGATCCAGTCTTC
CCCCATCGATGTGAGAAGGGGTCTTTACAAGAACATTGTGTTGTCCGGTG
GATCTACGCTGTACAAGGACTTTGGACGGCGTCTTCAGCGTGACATCCGT
CATCTGGTGGATGCACGCATTCGGGCGTCGGAGGCGCGCAGCGGAGGCGC
CAGAAGTGGTGGACTGGACGTGGCGGTTGTGACACACAAGAGACAGCGCC
ATGGACCGTGGTTCGGAGGTAGCTTGCTCGGACAGACGCCGGAGTTCCGC
AGTTACTGCCACACCAAGGCAGAGTACGACGAGATTGGTCCTAGTATCGT
GCGCCGCTTTGCGCTGTTGGGAGGCCCTGGCAGTTCGTAAGTTTCGCCGG
TAACGACTCGCCCTCTTTCGTCTTTCCCACCGCAATTGCGACCAAAGCTG
GTGCCGGAAGCGCTGGCTCCTCCGCTGCCGGTAGACCTCCTGTTGCGAAC
AAACCGTCCTTCCTAGCTAGCGGTGGTGGGGCAGGCTCCCATCTATCCGC
GAAGCGTGGTACAGAGGACTTGGACTTCTTCATTGGCGATGAAGCTCTGG
CAGCGGCCAACGGGCCCGGTTATGCGATCAACTACCCCATTCGCCATGGT
CAGATCGAGAACTGGGATCACATGGAGCGGTTCTGGTCGAATTCCATCTT
TAAGTACTTGCGCGTCGAGCCGGAGGACCACTACTTCCTCCTCACTGAGC
CGCGGTACCGGTTATTCCAAGCTTGATGGCTTCCCAGACCCCGGCCGTTG
TCATGGACAACCCTTGAACCCCCCCGAGAACCGTGAGAACACCGCCGAGA
TCATGTTCGAGTCTTTCAACTGTGCCGGTCTATACATTGCCGTCCAGGCT
GTGTTGGCCCTTGCTGCCTCGTGGACCTCCTCGAAGGTGACCGACCGCTC
TCTCACCGGAACGGTCATCGATTCCGGTGACGGTGTCACACACGTTATTC
CCGTCGCCGAAGGCTACGTCATCGGATCATCTATCAAGAGTATACCCATT
GCCGGTCGCGATATCACCTACTTTGTCCAGAGCTTGCTCCGTGACCGCGG
TGAGCCGGATAGCAGCCTGAAGACGGCTGAGAAGGTCAAGGAAGAGTACT
GCTACGTGTGCCCCGACATCGTCAAGGAATTCGCCCGCTACGACCGTGAG
CCGGACCGCCTGCTTAAGCACACCGTGACTTCGCCCAACGGCCGGACCGT
GAGCATCGATGTGGGCTACGAACGTTTCCTGGCGCCCGAGATCTTCTTCA
ACCCCGAGATTTATTCCTCGGACTTTTTGACCCCCCTGCCTAATGTCGTC
GACGGCGTGATCCAGTCTTCCCCCATCGATGTGAGAAGGGGTCTTTACAA
GAACATTGTGTTGTCCGGTGGATCTACGCTGTACAAGGACTTTGGACGGC
GTCTTCAGCGTGACATCCGTCATCTGGTGGATGCACGCATTCGGGCGTCG
GAGGCGCGCAGCGGAGGCGCCAGAAGTGGTGGACTGGACGTGGCGGTTGT
GACACACAAGAGACAGCGCCATGGACCGTGGTTCGGAGGTAGCTTGCTCG
GACAGACGCCGGAGTTCCGCAGTTACTGCCACACCAAGGCAGAGTACGAC
GAGATTGGTCCTAGTATCGTGCGCCGCTTTGCGCTGTTGGGAGGCCCTGG
CAGTTCGTAAGTTTCGCCGGTAACGACTCGCCCTCTTTCGTCTTTCCCAC
CGCAATTGCGACCAAAGCTGGTGCCGGAAGCGCTGGCTCCTCCGCTGCCG
GTAGACCTCCTGTTGCGAACAAACCGTCCTTCCTAGCTAGCGGTGGTGGG
GCAGGCTCCCATCTATCCGCGAAGCGTGGTACAGAGGACTTGGACTTCTT
CATTGGCGATGAAGCTCTGGCAGCGGCCAACGGGCCCGGTTATGCGATCA
ACTACCCCATTCGCCATGGTCAGATCGAGAACTGGGATCACATGGAGCGG
TTCTGGTCGAATTCCATCTTTAAGTACTTGCGCGTCGAGCCGGAGGACCA
CTACTTCCTCCTCACTGAGCCGCGGTACCGGTTATTCCAAGCTTGATGGC
TTCCCAGACCCCGGCCGTTGTCATGGACAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005885Arp2/3 protein complex
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0007015actin filament organization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARP3ATCC10864_006318Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006318-T1ATCC10864_006318-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006318-T1.cdsATCC10864_006318-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006318-T1.exon4ATCC10864_006318-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006318-T1.exon3ATCC10864_006318-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006318-T1.exon2ATCC10864_006318-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006318-T1.exon1ATCC10864_006318-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00022
InterProIPR020902
InterProIPR004000
InterProIPR015623
InterProIPR043129
Properties
Property NameValue
Product actin nucleation center
ProductArp2/3 complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:147233..148755 -
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