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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000166:151981..153209- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_006320-T1 ID=ATCC10864_006320-T1|Name=ATCC10864_006320-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1229bp|location=Sequence derived from alignment at MCQH01000166:151981..153209- (Aspergillus niger ATCC 10864)
ATGAATACCATCGACGCAACAGAACACTACGAAACCAGCGCCCACGGTAC
GTCCACCAACCACATACATCCATCACAATCTCATCCCCCTCCCAATTCCA
ACTTCTACCCTACAAACTAACAAGACGAAATATAGACCGGCCCCCCTCCC
TCCTAACCATCATCCTCGACACCAACCCACACGCCTGGGCACTCCTCAAC
CCCTCCCTTCCCCTCTCCACCGCCATCGCCAACATCCTCGTCTTCATCAA
CGCCCACCTAGCATGCAACTACGCGAACGAAGTAGCCGTGGTATCCTCAC
ACACCTCTCAAGCAACATGGCTCTACCCCGTCGAAAAAGCCACCACCACC
ACCACCGCCAATAACCTAGACTCCGACGGCGACATCTCCATGCGCTCCCA
ACAACCACCACCACCCACTCACACCAACATAAACAAATACCGCCCCTTCC
GCATCGTCGAAGAACAAGTCTCCACGCACCTCCACAACCTAATGTCCCAA
ACCACCCCAGAAACCCTCCAATCCACCACCTCAACTATGATGGCCGGCGC
GCTTACCCTAGCACTAAGCCACATCAACCGCCGCACGTTAGCATGGAATG
AAGCGCACGGGGGAGATATCGACACGACAAACCCCAATGACCCATCTTCC
ACATCCTCCTCATCACATAATACAAAGGGTACTGCGGAATCAACCCTCCA
ATCACGCATCCTCATTCTCTCTGTGTCAAGCTCCACCGGTTCAGCGCATC
AATATATCCCCATCATGAATGCTATATTCGCTTGCCAGAGGCTGCATATT
CCGATTGATGTATGTAAGGTGTCTGGCGATGCGGTATTCTTGCAGCAGGC
GTCGGATGCGACCAAGGGAGTGTATATGGCGTTGGATGAGCCGAAGGGAC
TATTGCAGTACTTAATGATGGCGTTTTTGCCGGATCAGAGGAGTAGACGC
CATTTGGTGCTGCCTACAAGAGTGGATGTGGATTTCCGGGCGGCGTGCTT
TTGTCATCGGAGGGTTGTGGACGTGGGGTTTGTGTGTTCGATTTGTTTGA
GTATCTTCTGTGAGCCGTTGGGGGATGGGGTGTGTTTGACTTGTGGGAGT
CGGTTGGATGTTAGTGATTATGGGGCTAAGCCGGCGGTGGTGGCTAGAAA
GAAGAAGAAGAAGAAGGTTAAGGGGAATGGGATGTCTGCGGCGGGGACGC
CTACGCCTACACCGACGCCGGGGCCGTGA back to topCoding sequence (CDS) from alignment at MCQH01000166:151981..153209- >ATCC10864_006320-T1 ID=ATCC10864_006320-T1|Name=ATCC10864_006320-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2280bp|location=Sequence derived from alignment at MCQH01000166:151981..153209- (Aspergillus niger ATCC 10864)
ACCGGCCCCCCTCCCTCCTAACCATCATCCTCGACACCAACCCACACGCC
TGGGCACTCCTCAACCCCTCCCTTCCCCTCTCCACCGCCATCGCCAACAT
CCTCGTCTTCATCAACGCCCACCTAGCATGCAACTACGCGAACGAAGTAG
CCGTGGTATCCTCACACACCTCTCAAGCAACATGGCTCTACCCCGTCGAA
AAAGCCACCACCACCACCACCGCCAATAACCTAGACTCCGACGGCGACAT
CTCCATGCGCTCCCAACAACCACCACCACCCACTCACACCAACATAAACA
AATACCGCCCCTTCCGCATCGTCGAAGAACAAGTCTCCACGCACCTCCAC
AACCTAATGTCCCAAACCACCCCAGAAACCCTCCAATCCACCACCTCAAC
TATGATGGCCGGCGCGCTTACCCTAGCACTAAGCCACATCAACCGCCGCA
CGTTAGCATGGAATGAAGCGCACGGGGGAGATATCGACACGACAAACCCC
AATGACCCATCTTCCACATCCTCCTCATCACATAATACAAAGGGTACTGC
GGAATCAACCCTCCAATCACGCATCCTCATTCTCTCTGTGTCAAGCTCCA
CCGGTTCAGCGCATCAATATATCCCCATCATGAATGCTATATTCGCTTGC
CAGAGGCTGCATATTCCGATTGATGTATGTAAGGTGTCTGGCGATGCGGT
ATTCTTGCAGCAGGCGTCGGATGCGACCAAGGGAGTGTATATGGCGTTGG
ATGAGCCGAAGGGACTATTGCAGTACTTAATGATGGCGTTTTTGCCGGAT
CAGAGGAGTAGACGCCATTTGGTGCTGCCTACAAGAGTGGATGTGGATTT
CCGGGCGGCGTGCTTTTGTCATCGGAGGGTTGTGGACGTGGGGTTTGTGT
GTTCGATTTGTTTGAGTATCTTCTGTGAGCCGTTGGGGGATGGGGTGTGT
TTGACTTGTGGGAGTCGGTTGGATGTTAGTGATTATGGGGCTAAGCCGGC
GGTGGTGGCTAGAAAGAAGAAGAAGAAGAAGGTTAAGGGGAATGGGATGT
CTGCGGCGGGGACGCCTACGCCTACACCGACGCCGGGGCCGTGAATGAAT
ACCATCGACGCAACAGAACACTACGAAACCAGCGCCCACGACCGGCCCCC
CTCCCTCCTAACCATCATCCTCGACACCAACCCACACGCCTGGGCACTCC
TCAACCCCTCCCTTCCCCTCTCCACCGCCATCGCCAACATCCTCGTCTTC
ATCAACGCCCACCTAGCATGCAACTACGCGAACGAAGTAGCCGTGGTATC
CTCACACACCTCTCAAGCAACATGGCTCTACCCCGTCGAAAAAGCCACCA
CCACCACCACCGCCAATAACCTAGACTCCGACGGCGACATCTCCATGCGC
TCCCAACAACCACCACCACCCACTCACACCAACATAAACAAATACCGCCC
CTTCCGCATCGTCGAAGAACAAGTCTCCACGCACCTCCACAACCTAATGT
CCCAAACCACCCCAGAAACCCTCCAATCCACCACCTCAACTATGATGGCC
GGCGCGCTTACCCTAGCACTAAGCCACATCAACCGCCGCACGTTAGCATG
GAATGAAGCGCACGGGGGAGATATCGACACGACAAACCCCAATGACCCAT
CTTCCACATCCTCCTCATCACATAATACAAAGGGTACTGCGGAATCAACC
CTCCAATCACGCATCCTCATTCTCTCTGTGTCAAGCTCCACCGGTTCAGC
GCATCAATATATCCCCATCATGAATGCTATATTCGCTTGCCAGAGGCTGC
ATATTCCGATTGATGTATGTAAGGTGTCTGGCGATGCGGTATTCTTGCAG
CAGGCGTCGGATGCGACCAAGGGAGTGTATATGGCGTTGGATGAGCCGAA
GGGACTATTGCAGTACTTAATGATGGCGTTTTTGCCGGATCAGAGGAGTA
GACGCCATTTGGTGCTGCCTACAAGAGTGGATGTGGATTTCCGGGCGGCG
TGCTTTTGTCATCGGAGGGTTGTGGACGTGGGGTTTGTGTGTTCGATTTG
TTTGAGTATCTTCTGTGAGCCGTTGGGGGATGGGGTGTGTTTGACTTGTG
GGAGTCGGTTGGATGTTAGTGATTATGGGGCTAAGCCGGCGGTGGTGGCT
AGAAAGAAGAAGAAGAAGAAGGTTAAGGGGAATGGGATGTCTGCGGCGGG
GACGCCTACGCCTACACCGACGCCGGGGCCGTGAATGAATACCATCGACG
CAACAGAACACTACGAAACCAGCGCCCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000439 | transcription factor TFIIH core complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006289 | nucleotide-excision repair |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR004600 |
| PFAM | PF03850 |
| InterPro | IPR036465 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926369X |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000166 | supercontig | MCQH01000166:151981..153209 - |
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