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ATCC10864_006324-T1, ATCC10864_006324-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006324-T1
Unique NameATCC10864_006324-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:169516..171952+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006324-T1 ID=ATCC10864_006324-T1|Name=ATCC10864_006324-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2437bp|location=Sequence derived from alignment at MCQH01000166:169516..171952+ (Aspergillus niger ATCC 10864)
ATGGTTGATCGACGCTCGGATTCTGAAAACGGTTCGCGTGCTAAACGTCA
GAAGATGGACAAGTCTGAAACCGATCCCAAGGACAACCCGTACCTGGCTC
ACATGTATGCGGACGGCAACTCCAACACAGGGACCGATGGCACCACAGAT
CTTCACCCCGCCTTTGGGAAGATGAAGAGGCACCAGACTACCGCTGCGCT
GGCTAAGAAGGTGGAAGATGGTGATATCAACCCGTTCAACGGCCAACCTT
TCTCCAGCAAATATGTTTCCATCTTGCAGACTCGTCGGGACCTGCCCGTG
CATGCTCAGAGGTGAGTTTCCCTTACCCGTGTAGATGGTTTGCCACATCG
CAAATGGGTTCTAACTATATGTTTCTATAGAGATGAATTCCTGGAGCTCT
ATCAAAAGTCGCAGATTCTAGTTTTCGTCGGTGAAACTGGTTCCGGAAAG
ACCACGCAGATTCCCCAGTTCGTCCTGTTCGATGACATGCCGCAAACTCA
GCGCAAGATGGTCGCTTGTACCCAGCCTCGTCGTGTCGCCGCCATGTCCG
TCGCTCAACGTGTCGCCGCCGAGCTGGATGTCAAGCTTGGAGAGGAAGTT
GGTTACAGCATCCGTTTCGAAGATATGACCAGTTCCAAGACTGTGCTCAA
GTACATGACGGACGGTATGCTTCTGAGAGAAGCCATGAACGACCACAACC
TGAACCGCTACAGTACCATCATTCTGGACGAGGCCCACGAGAGAACAATG
GCCACTGATGTTCTCATGGGTCTTCTCAAGGAAGTTGTTGTGCGCCGACC
TGACCTGAAGATCATTATCATGTCTGCTACTCTGGATGCTCAGAAGTTCC
AGCGTTACTTCAACGATGCCCCTCTCCTTGCGGTTCCCGGTCGTACTCAC
CCTGTCGAGATCTTCTATACCCCTGAGCCTGAGCAGGACTATGTGGAAGC
TGCCATTCGCACCGTCCTGCAGATCCACGCGACAGAAGACGAAGGTGATA
TCCTTCTTTTCTTGACTGGTGAAGAAGAAATCGAAGACGCCTCACGGAAG
ATCTCGTTAGAAGCCGATGAGATGGTAAGAGAGGCCGATGCTGGTCCCAT
CAAGGTCTACCCACTTTACGGTAGTCTGCCCCCGCATATGCAGCAGCGCA
TTTTCGAACCGGCACCCCCTCCTCGCCGTCCGGGAGGCCGTCCTGGCCGG
AAGGTCATTGTATCCACCAACATCGCTGAAACTTCGCTTACCATCGACGG
TATCGTCTACGTCGTCGATCCTGGCTTCTCGAAGCAGAAGATCTACAACC
CCCGTATCCGTGTCGAGTCTCTTTTGGTATCTCCCATCTCGAAGGCTTCC
GCGCAACAGAGAGCTGGTCGTGCTGGTCGTACGCGCCCCGGAAAGTGCTT
CCGTCTGTACACTGAGGGGGCTTTCAAGAAGGAACTCATCGACCAGACAT
ACCCTGAGATTCTGCGCTCGAACCTTTCCTCTACCGTGCTGGAATTGAAG
AAGCTAGGCATTGATGATCTTGTTCACTTCGATCTGATGGATCCTCCTGC
TCCGGAGACTCTGATGAGAGCTTTGGAAGAGCTCAACTATCTGGCTTGCT
TGGACGATGATGGAAACCTCACTCAGCTGGGACGCCTGGCCTCCGAGTTC
CCCCTTGATCCCGCACTTGCTGTGATGTTGATCAGCTCCCCCGAATTTTA
CTGCTCCAACGAAATCCTTTCTATCACAGCTCTGCTTTCCGTCCCGCAAG
TCTTCGTCAGACCTGCTTCTCAGCGGAAGCGTGCTGATGAGATGAAGGAT
CTTTTTGCCCACCCTGACGGTGACCACCTTACCCTTCTCAATGTCTACCA
TGCTTTTAAGAGCCCTGAAGCGCAGGAGAACTTGAAGCAATGGTGCCACG
ACCACTTCCTCTCTCTTAGATCGCTGCAATCGGCAGACAACGTGCGCATG
CAGCTTCTGCGCATCATGGAGCGTGAGGAACTCGAGATGGTGTCCACCCC
CTTCGAGGACAAGAAATATTACGAAAACATCCGCCGTGCGCTGTGCGCAG
GCTTCTTCATGCAGGTCGCCAAGAAGGAGACTCAGGGCAAGAACATGTAT
GTTACGATCAAGGACAACCAGAACGTTCTTTTGCACCCCTCGACCGTCTT
GGGCCACGAAGCGGAATGGGTTCTCTACAACGAATTCGTCCTCACCACCA
AGAATTACATTCGGACTGTCACGGCTGTCAAGCCCGAATGGCTCATTGTA
AGTCTTACCTTGACCCTCAATCAAACACTCAGACCAGTACTAACACAGTG
TCTCCCAGGACATTGCACCCACTTACTACGACATCTCCGGCTTCCCCAAG
GGCGAGATCCGCTCCTCCCTCCTTCGCGCTGCTGAGAGACTTTCCCGCAA
GGAGAAGATGCGCTCTGATTCCAGCAGAAGACGATAG
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Coding sequence (CDS) from alignment at MCQH01000166:169516..171952+

>ATCC10864_006324-T1 ID=ATCC10864_006324-T1|Name=ATCC10864_006324-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6921bp|location=Sequence derived from alignment at MCQH01000166:169516..171952+ (Aspergillus niger ATCC 10864)
ATGGTTGATCGACGCTCGGATTCTGAAAACGGTTCGCGTGCTAAACGTCA
GAAGATGGACAAGTCTGAAACCGATCCCAAGGACAACCCGTACCTGGCTC
ACATGTATGCGGACGGCAACTCCAACACAGGGACCGATGGCACCACAGAT
CTTCACCCCGCCTTTGGGAAGATGAAGAGGCACCAGACTACCGCTGCGCT
GGCTAAGAAGGTGGAAGATGGTGATATCAACCCGTTCAACGGCCAACCTT
TCTCCAGCAAATATGTTTCCATCTTGCAGACTCGTCGGGACCTGCCCGTG
CATGCTCAGAGAGATGAATTCCTGGAGCTCTATCAAAAGTCGCAGATTCT
AGTTTTCGTCGGTGAAACTGGTTCCGGAAAGACCACGCAGATTCCCCAGT
TCGTCCTGTTCGATGACATGCCGCAAACTCAGCGCAAGATGGTCGCTTGT
ACCCAGCCTCGTCGTGTCGCCGCCATGTCCGTCGCTCAACGTGTCGCCGC
CGAGCTGGATGTCAAGCTTGGAGAGGAAGTTGGTTACAGCATCCGTTTCG
AAGATATGACCAGTTCCAAGACTGTGCTCAAGTACATGACGGACGGTATG
CTTCTGAGAGAAGCCATGAACGACCACAACCTGAACCGCTACAGTACCAT
CATTCTGGACGAGGCCCACGAGAGAACAATGGCCACTGATGTTCTCATGG
GTCTTCTCAAGGAAGTTGTTGTGCGCCGACCTGACCTGAAGATCATTATC
ATGTCTGCTACTCTGGATGCTCAGAAGTTCCAGCGTTACTTCAACGATGC
CCCTCTCCTTGCGGTTCCCGGTCGTACTCACCCTGTCGAGATCTTCTATA
CCCCTGAGCCTGAGCAGGACTATGTGGAAGCTGCCATTCGCACCGTCCTG
CAGATCCACGCGACAGAAGACGAAGGTGATATCCTTCTTTTCTTGACTGG
TGAAGAAGAAATCGAAGACGCCTCACGGAAGATCTCGTTAGAAGCCGATG
AGATGGTAAGAGAGGCCGATGCTGGTCCCATCAAGGTCTACCCACTTTAC
GGTAGTCTGCCCCCGCATATGCAGCAGCGCATTTTCGAACCGGCACCCCC
TCCTCGCCGTCCGGGAGGCCGTCCTGGCCGGAAGGTCATTGTATCCACCA
ACATCGCTGAAACTTCGCTTACCATCGACGGTATCGTCTACGTCGTCGAT
CCTGGCTTCTCGAAGCAGAAGATCTACAACCCCCGTATCCGTGTCGAGTC
TCTTTTGGTATCTCCCATCTCGAAGGCTTCCGCGCAACAGAGAGCTGGTC
GTGCTGGTCGTACGCGCCCCGGAAAGTGCTTCCGTCTGTACACTGAGGGG
GCTTTCAAGAAGGAACTCATCGACCAGACATACCCTGAGATTCTGCGCTC
GAACCTTTCCTCTACCGTGCTGGAATTGAAGAAGCTAGGCATTGATGATC
TTGTTCACTTCGATCTGATGGATCCTCCTGCTCCGGAGACTCTGATGAGA
GCTTTGGAAGAGCTCAACTATCTGGCTTGCTTGGACGATGATGGAAACCT
CACTCAGCTGGGACGCCTGGCCTCCGAGTTCCCCCTTGATCCCGCACTTG
CTGTGATGTTGATCAGCTCCCCCGAATTTTACTGCTCCAACGAAATCCTT
TCTATCACAGCTCTGCTTTCCGTCCCGCAAGTCTTCGTCAGACCTGCTTC
TCAGCGGAAGCGTGCTGATGAGATGAAGGATCTTTTTGCCCACCCTGACG
GTGACCACCTTACCCTTCTCAATGTCTACCATGCTTTTAAGAGCCCTGAA
GCGCAGGAGAACTTGAAGCAATGGTGCCACGACCACTTCCTCTCTCTTAG
ATCGCTGCAATCGGCAGACAACGTGCGCATGCAGCTTCTGCGCATCATGG
AGCGTGAGGAACTCGAGATGGTGTCCACCCCCTTCGAGGACAAGAAATAT
TACGAAAACATCCGCCGTGCGCTGTGCGCAGGCTTCTTCATGCAGGTCGC
CAAGAAGGAGACTCAGGGCAAGAACATGTATGTTACGATCAAGGACAACC
AGAACGTTCTTTTGCACCCCTCGACCGTCTTGGGCCACGAAGCGGAATGG
GTTCTCTACAACGAATTCGTCCTCACCACCAAGAATTACATTCGGACTGT
CACGGCTGTCAAGCCCGAATGGCTCATTGACATTGCACCCACTTACTACG
ACATCTCCGGCTTCCCCAAGGGCGAGATCCGCTCCTCCCTCCTTCGCGCT
GCTGAGAGACTTTCCCGCAAGGAGAAGATGCGCTCTGATTCCAGCAGAAG
ACGATAGATGGTTGATCGACGCTCGGATTCTGAAAACGGTTCGCGTGCTA
AACGTCAGAAGATGGACAAGTCTGAAACCGATCCCAAGGACAACCCGTAC
CTGGCTCACATGTATGCGGACGGCAACTCCAACACAGGGACCGATGGCAC
CACAGATCTTCACCCCGCCTTTGGGAAGATGAAGAGGCACCAGACTACCG
CTGCGCTGGCTAAGAAGGTGGAAGATGGTGATATCAACCCGTTCAACGGC
CAACCTTTCTCCAGCAAATATGTTTCCATCTTGCAGACTCGTCGGGACCT
GCCCGTGCATGCTCAGAGAGATGAATTCCTGGAGCTCTATCAAAAGTCGC
AGATTCTAGTTTTCGTCGGTGAAACTGGTTCCGGAAAGACCACGCAGATT
CCCCAGTTCGTCCTGTTCGATGACATGCCGCAAACTCAGCGCAAGATGGT
CGCTTGTACCCAGCCTCGTCGTGTCGCCGCCATGTCCGTCGCTCAACGTG
TCGCCGCCGAGCTGGATGTCAAGCTTGGAGAGGAAGTTGGTTACAGCATC
CGTTTCGAAGATATGACCAGTTCCAAGACTGTGCTCAAGTACATGACGGA
CGGTATGCTTCTGAGAGAAGCCATGAACGACCACAACCTGAACCGCTACA
GTACCATCATTCTGGACGAGGCCCACGAGAGAACAATGGCCACTGATGTT
CTCATGGGTCTTCTCAAGGAAGTTGTTGTGCGCCGACCTGACCTGAAGAT
CATTATCATGTCTGCTACTCTGGATGCTCAGAAGTTCCAGCGTTACTTCA
ACGATGCCCCTCTCCTTGCGGTTCCCGGTCGTACTCACCCTGTCGAGATC
TTCTATACCCCTGAGCCTGAGCAGGACTATGTGGAAGCTGCCATTCGCAC
CGTCCTGCAGATCCACGCGACAGAAGACGAAGGTGATATCCTTCTTTTCT
TGACTGGTGAAGAAGAAATCGAAGACGCCTCACGGAAGATCTCGTTAGAA
GCCGATGAGATGGTAAGAGAGGCCGATGCTGGTCCCATCAAGGTCTACCC
ACTTTACGGTAGTCTGCCCCCGCATATGCAGCAGCGCATTTTCGAACCGG
CACCCCCTCCTCGCCGTCCGGGAGGCCGTCCTGGCCGGAAGGTCATTGTA
TCCACCAACATCGCTGAAACTTCGCTTACCATCGACGGTATCGTCTACGT
CGTCGATCCTGGCTTCTCGAAGCAGAAGATCTACAACCCCCGTATCCGTG
TCGAGTCTCTTTTGGTATCTCCCATCTCGAAGGCTTCCGCGCAACAGAGA
GCTGGTCGTGCTGGTCGTACGCGCCCCGGAAAGTGCTTCCGTCTGTACAC
TGAGGGGGCTTTCAAGAAGGAACTCATCGACCAGACATACCCTGAGATTC
TGCGCTCGAACCTTTCCTCTACCGTGCTGGAATTGAAGAAGCTAGGCATT
GATGATCTTGTTCACTTCGATCTGATGGATCCTCCTGCTCCGGAGACTCT
GATGAGAGCTTTGGAAGAGCTCAACTATCTGGCTTGCTTGGACGATGATG
GAAACCTCACTCAGCTGGGACGCCTGGCCTCCGAGTTCCCCCTTGATCCC
GCACTTGCTGTGATGTTGATCAGCTCCCCCGAATTTTACTGCTCCAACGA
AATCCTTTCTATCACAGCTCTGCTTTCCGTCCCGCAAGTCTTCGTCAGAC
CTGCTTCTCAGCGGAAGCGTGCTGATGAGATGAAGGATCTTTTTGCCCAC
CCTGACGGTGACCACCTTACCCTTCTCAATGTCTACCATGCTTTTAAGAG
CCCTGAAGCGCAGGAGAACTTGAAGCAATGGTGCCACGACCACTTCCTCT
CTCTTAGATCGCTGCAATCGGCAGACAACGTGCGCATGCAGCTTCTGCGC
ATCATGGAGCGTGAGGAACTCGAGATGGTGTCCACCCCCTTCGAGGACAA
GAAATATTACGAAAACATCCGCCGTGCGCTGTGCGCAGGCTTCTTCATGC
AGGTCGCCAAGAAGGAGACTCAGGGCAAGAACATGTATGTTACGATCAAG
GACAACCAGAACGTTCTTTTGCACCCCTCGACCGTCTTGGGCCACGAAGC
GGAATGGGTTCTCTACAACGAATTCGTCCTCACCACCAAGAATTACATTC
GGACTGTCACGGCTGTCAAGCCCGAATGGCTCATTGACATTGCACCCACT
TACTACGACATCTCCGGCTTCCCCAAGGGCGAGATCCGCTCCTCCCTCCT
TCGCGCTGCTGAGAGACTTTCCCGCAAGGAGAAGATGCGCTCTGATTCCA
GCAGAAGACGATAGATGGTTGATCGACGCTCGGATTCTGAAAACGGTTCG
CGTGCTAAACGTCAGAAGATGGACAAGTCTGAAACCGATCCCAAGGACAA
CCCGTACCTGGCTCACATGTATGCGGACGGCAACTCCAACACAGGGACCG
ATGGCACCACAGATCTTCACCCCGCCTTTGGGAAGATGAAGAGGCACCAG
ACTACCGCTGCGCTGGCTAAGAAGGTGGAAGATGGTGATATCAACCCGTT
CAACGGCCAACCTTTCTCCAGCAAATATGTTTCCATCTTGCAGACTCGTC
GGGACCTGCCCGTGCATGCTCAGAGAGATGAATTCCTGGAGCTCTATCAA
AAGTCGCAGATTCTAGTTTTCGTCGGTGAAACTGGTTCCGGAAAGACCAC
GCAGATTCCCCAGTTCGTCCTGTTCGATGACATGCCGCAAACTCAGCGCA
AGATGGTCGCTTGTACCCAGCCTCGTCGTGTCGCCGCCATGTCCGTCGCT
CAACGTGTCGCCGCCGAGCTGGATGTCAAGCTTGGAGAGGAAGTTGGTTA
CAGCATCCGTTTCGAAGATATGACCAGTTCCAAGACTGTGCTCAAGTACA
TGACGGACGGTATGCTTCTGAGAGAAGCCATGAACGACCACAACCTGAAC
CGCTACAGTACCATCATTCTGGACGAGGCCCACGAGAGAACAATGGCCAC
TGATGTTCTCATGGGTCTTCTCAAGGAAGTTGTTGTGCGCCGACCTGACC
TGAAGATCATTATCATGTCTGCTACTCTGGATGCTCAGAAGTTCCAGCGT
TACTTCAACGATGCCCCTCTCCTTGCGGTTCCCGGTCGTACTCACCCTGT
CGAGATCTTCTATACCCCTGAGCCTGAGCAGGACTATGTGGAAGCTGCCA
TTCGCACCGTCCTGCAGATCCACGCGACAGAAGACGAAGGTGATATCCTT
CTTTTCTTGACTGGTGAAGAAGAAATCGAAGACGCCTCACGGAAGATCTC
GTTAGAAGCCGATGAGATGGTAAGAGAGGCCGATGCTGGTCCCATCAAGG
TCTACCCACTTTACGGTAGTCTGCCCCCGCATATGCAGCAGCGCATTTTC
GAACCGGCACCCCCTCCTCGCCGTCCGGGAGGCCGTCCTGGCCGGAAGGT
CATTGTATCCACCAACATCGCTGAAACTTCGCTTACCATCGACGGTATCG
TCTACGTCGTCGATCCTGGCTTCTCGAAGCAGAAGATCTACAACCCCCGT
ATCCGTGTCGAGTCTCTTTTGGTATCTCCCATCTCGAAGGCTTCCGCGCA
ACAGAGAGCTGGTCGTGCTGGTCGTACGCGCCCCGGAAAGTGCTTCCGTC
TGTACACTGAGGGGGCTTTCAAGAAGGAACTCATCGACCAGACATACCCT
GAGATTCTGCGCTCGAACCTTTCCTCTACCGTGCTGGAATTGAAGAAGCT
AGGCATTGATGATCTTGTTCACTTCGATCTGATGGATCCTCCTGCTCCGG
AGACTCTGATGAGAGCTTTGGAAGAGCTCAACTATCTGGCTTGCTTGGAC
GATGATGGAAACCTCACTCAGCTGGGACGCCTGGCCTCCGAGTTCCCCCT
TGATCCCGCACTTGCTGTGATGTTGATCAGCTCCCCCGAATTTTACTGCT
CCAACGAAATCCTTTCTATCACAGCTCTGCTTTCCGTCCCGCAAGTCTTC
GTCAGACCTGCTTCTCAGCGGAAGCGTGCTGATGAGATGAAGGATCTTTT
TGCCCACCCTGACGGTGACCACCTTACCCTTCTCAATGTCTACCATGCTT
TTAAGAGCCCTGAAGCGCAGGAGAACTTGAAGCAATGGTGCCACGACCAC
TTCCTCTCTCTTAGATCGCTGCAATCGGCAGACAACGTGCGCATGCAGCT
TCTGCGCATCATGGAGCGTGAGGAACTCGAGATGGTGTCCACCCCCTTCG
AGGACAAGAAATATTACGAAAACATCCGCCGTGCGCTGTGCGCAGGCTTC
TTCATGCAGGTCGCCAAGAAGGAGACTCAGGGCAAGAACATGTATGTTAC
GATCAAGGACAACCAGAACGTTCTTTTGCACCCCTCGACCGTCTTGGGCC
ACGAAGCGGAATGGGTTCTCTACAACGAATTCGTCCTCACCACCAAGAAT
TACATTCGGACTGTCACGGCTGTCAAGCCCGAATGGCTCATTGACATTGC
ACCCACTTACTACGACATCTCCGGCTTCCCCAAGGGCGAGATCCGCTCCT
CCCTCCTTCGCGCTGCTGAGAGACTTTCCCGCAAGGAGAAGATGCGCTCT
GATTCCAGCAGAAGACGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004386helicase activity
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0003724RNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRP43ATCC10864_006324Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006324-T1.exon1ATCC10864_006324-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006324-T1.exon2ATCC10864_006324-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006324-T1.exon3ATCC10864_006324-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006324-T1.cdsATCC10864_006324-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006324-T1ATCC10864_006324-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00270
InterProIPR044756
InterProIPR027417
InterProIPR002464
InterProIPR011709
PFAMPF00271
PFAMPF04408
InterProIPR007502
PFAMPF07717
InterProIPR001650
InterProIPR011545
InterProIPR014001
Properties
Property NameValue
ProductDEAH-box ATP-dependent RNA helicase prp43
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:169516..171952 +
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