You are here

Home

ATCC10864_006329-T1, ATCC10864_006329-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006329-T1
Unique NameATCC10864_006329-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:181532..183133-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006329-T1 ID=ATCC10864_006329-T1|Name=ATCC10864_006329-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1602bp|location=Sequence derived from alignment at MCQH01000166:181532..183133- (Aspergillus niger ATCC 10864)
ATGTCGATGAACTTCGTGACGTTTAACCAGGACTATAGCTACCTAGCTGT
GGGTAAGGCTCTTCCTGCTCCCGTCTCTTACCTTCTATACTCGTGAAATA
TGTCTTGACACCTGTCAGCGACTTCCAAGGGGTTTCGCATCTTCACCACG
GACCCTTTCGCGAAAAGCTATGAGACGAAGGAAGGGAATATTGCCATCAT
TGAGATGCTATTCTCGACGTCCCTGGTTGCGCTGATACTATCACCACGTC
GCCTTCAAATAACTAATACCAAGGTTCGTAGGATGTCCTTCGCGCATTAT
GTTAGATTCTACCTTTTCAATAATCGCATAACTTCTCCCCTGTATTCTGT
TGCGCGATTCACGAGGCGCAAATGGTTAACGCTTTTTCTCACATCTGCAA
CATATAGCGCCAATCCACGATATGCGAATTGACTTTTCCCACGACCGTGC
TGGCAGTGAAGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAG
ATTTACCTCTATGATATCCAGACAATGAAGCTCCTGTATACCATCGAGAC
CTCTCCCAATCCCAACGGTAAGGCTGCGACTACATTTGGATGTGGATGTG
CTAGATTGTCTAACTGCTGGCAGCACTATGTGCCCTCTCCCCATCCTCCG
ATAACTGCTATCTGGCATACCCTCTGCCGCAAAAGGCACCGCCCTCTACG
TTCCAACCTCCAGCTCACGCTCCTCCGGGGACGACTCATGTTACACCTAC
AAGTGGCGAGGTCTTGATCTTTGATACTTTAAAGCTGGAAGCGATCAACG
TTATTGAAGCGCATCGGTCTCCGCTAGCGTGCATCACGTTGAACAGTGAT
GGAACCCTTATAGCCACGGCATCGGACAAGGGAACTATCATACGGGTATT
CTCTGTCCCCGACGGGCGCAAGCTTTACCAGTTCCGGCGAGGGTCGATAC
CATCCAGAATCTACAGCATGTCTTTCAACACCACCTCGACTCTCCTTTGT
GTATCTTCTTCCACGGAAACGATCCACTTATTCAAATTAAGCCTTCAATC
ACAGTCACCGGACGCCACACCATCCTCTTCACTTACAGCCGCTGATCGAA
GGTCTAGCCAAAGCTCATTGGGGCAATTATCTGACGCCGATGACAGGGTT
GGAGATATGGGCTCCTCCGAGCTTGCGTCGAGGAAACACAATGGAACTCT
GATGGGCATGATCCGGCGCACCTCACAAAATGTTGGCAGCACATTTGCTG
CCAAGGTTGGAGGCTACCTCCCCAAGGGAGTCAGCGAGATGTGGGAGCCC
GCCCGAGACTTCGCTTGGATCAAACTACCAAAATCTAACCCAGGGCCCGG
AGCAAATGGGAACAACGGCCCGTTGCGCAGTGTGGTCGCTATGAGCGCCA
ACACTCCCCAGGTTATGGTGGTGACTAGCGACGGCAACTTTTATGTGTTC
AACATCGATCTCTCCAAGGGTGGTGAGGGGACGTTGACTAAACAATACTC
GTGAGCCTGCTTTTCCTATCAGTATAAAAGGACTCGTATTGACTGATAAA
TAGTGTGCTCGATACAAATGACCGCCTGGGTTACTCCGTGATGGACTATT
AA
back to top

Coding sequence (CDS) from alignment at MCQH01000166:181532..183133-

>ATCC10864_006329-T1 ID=ATCC10864_006329-T1|Name=ATCC10864_006329-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6465bp|location=Sequence derived from alignment at MCQH01000166:181532..183133- (Aspergillus niger ATCC 10864)
TGTGCTCGATACAAATGACCGCCTGGGTTACTCCGTGATGGACTATTAAC
ACTATGTGCCCTCTCCCCATCCTCCGATAACTGCTATCTGGCATACCCTC
TGCCGCAAAAGGCACCGCCCTCTACGTTCCAACCTCCAGCTCACGCTCCT
CCGGGGACGACTCATGTTACACCTACAAGTGGCGAGGTCTTGATCTTTGA
TACTTTAAAGCTGGAAGCGATCAACGTTATTGAAGCGCATCGGTCTCCGC
TAGCGTGCATCACGTTGAACAGTGATGGAACCCTTATAGCCACGGCATCG
GACAAGGGAACTATCATACGGGTATTCTCTGTCCCCGACGGGCGCAAGCT
TTACCAGTTCCGGCGAGGGTCGATACCATCCAGAATCTACAGCATGTCTT
TCAACACCACCTCGACTCTCCTTTGTGTATCTTCTTCCACGGAAACGATC
CACTTATTCAAATTAAGCCTTCAATCACAGTCACCGGACGCCACACCATC
CTCTTCACTTACAGCCGCTGATCGAAGGTCTAGCCAAAGCTCATTGGGGC
AATTATCTGACGCCGATGACAGGGTTGGAGATATGGGCTCCTCCGAGCTT
GCGTCGAGGAAACACAATGGAACTCTGATGGGCATGATCCGGCGCACCTC
ACAAAATGTTGGCAGCACATTTGCTGCCAAGGTTGGAGGCTACCTCCCCA
AGGGAGTCAGCGAGATGTGGGAGCCCGCCCGAGACTTCGCTTGGATCAAA
CTACCAAAATCTAACCCAGGGCCCGGAGCAAATGGGAACAACGGCCCGTT
GCGCAGTGTGGTCGCTATGAGCGCCAACACTCCCCAGGTTATGGTGGTGA
CTAGCGACGGCAACTTTTATGTGTTCAACATCGATCTCTCCAAGGGTGGT
GAGGGGACGTTGACTAAACAATACTCCGCCAATCCACGATATGCGAATTG
ACTTTTCCCACGACCGTGCTGGCAGTGAAGCTGAACCGGAAACGGCTTGT
CATTGTGCTGGAGGACCAGATTTACCTCTATGATATCCAGACAATGAAGC
TCCTGTATACCATCGAGACCTCTCCCAATCCCAACGCGACTTCCAAGGGG
TTTCGCATCTTCACCACGGACCCTTTCGCGAAAAGCTATGAGACGAAGGA
AGGGAATATTGCCATCATTGAGATGCTATTCTCGACGTCCCTGGTTGCGC
TGATACTATCACCACGTCGCCTTCAAATAACTAATACCAAGATGTCGATG
AACTTCGTGACGTTTAACCAGGACTATAGCTACCTAGCTGTGGTGTGCTC
GATACAAATGACCGCCTGGGTTACTCCGTGATGGACTATTAACACTATGT
GCCCTCTCCCCATCCTCCGATAACTGCTATCTGGCATACCCTCTGCCGCA
AAAGGCACCGCCCTCTACGTTCCAACCTCCAGCTCACGCTCCTCCGGGGA
CGACTCATGTTACACCTACAAGTGGCGAGGTCTTGATCTTTGATACTTTA
AAGCTGGAAGCGATCAACGTTATTGAAGCGCATCGGTCTCCGCTAGCGTG
CATCACGTTGAACAGTGATGGAACCCTTATAGCCACGGCATCGGACAAGG
GAACTATCATACGGGTATTCTCTGTCCCCGACGGGCGCAAGCTTTACCAG
TTCCGGCGAGGGTCGATACCATCCAGAATCTACAGCATGTCTTTCAACAC
CACCTCGACTCTCCTTTGTGTATCTTCTTCCACGGAAACGATCCACTTAT
TCAAATTAAGCCTTCAATCACAGTCACCGGACGCCACACCATCCTCTTCA
CTTACAGCCGCTGATCGAAGGTCTAGCCAAAGCTCATTGGGGCAATTATC
TGACGCCGATGACAGGGTTGGAGATATGGGCTCCTCCGAGCTTGCGTCGA
GGAAACACAATGGAACTCTGATGGGCATGATCCGGCGCACCTCACAAAAT
GTTGGCAGCACATTTGCTGCCAAGGTTGGAGGCTACCTCCCCAAGGGAGT
CAGCGAGATGTGGGAGCCCGCCCGAGACTTCGCTTGGATCAAACTACCAA
AATCTAACCCAGGGCCCGGAGCAAATGGGAACAACGGCCCGTTGCGCAGT
GTGGTCGCTATGAGCGCCAACACTCCCCAGGTTATGGTGGTGACTAGCGA
CGGCAACTTTTATGTGTTCAACATCGATCTCTCCAAGGGTGGTGAGGGGA
CGTTGACTAAACAATACTCCGCCAATCCACGATATGCGAATTGACTTTTC
CCACGACCGTGCTGGCAGTGAAGCTGAACCGGAAACGGCTTGTCATTGTG
CTGGAGGACCAGATTTACCTCTATGATATCCAGACAATGAAGCTCCTGTA
TACCATCGAGACCTCTCCCAATCCCAACGCGACTTCCAAGGGGTTTCGCA
TCTTCACCACGGACCCTTTCGCGAAAAGCTATGAGACGAAGGAAGGGAAT
ATTGCCATCATTGAGATGCTATTCTCGACGTCCCTGGTTGCGCTGATACT
ATCACCACGTCGCCTTCAAATAACTAATACCAAGATGTCGATGAACTTCG
TGACGTTTAACCAGGACTATAGCTACCTAGCTGTGGTGTGCTCGATACAA
ATGACCGCCTGGGTTACTCCGTGATGGACTATTAACACTATGTGCCCTCT
CCCCATCCTCCGATAACTGCTATCTGGCATACCCTCTGCCGCAAAAGGCA
CCGCCCTCTACGTTCCAACCTCCAGCTCACGCTCCTCCGGGGACGACTCA
TGTTACACCTACAAGTGGCGAGGTCTTGATCTTTGATACTTTAAAGCTGG
AAGCGATCAACGTTATTGAAGCGCATCGGTCTCCGCTAGCGTGCATCACG
TTGAACAGTGATGGAACCCTTATAGCCACGGCATCGGACAAGGGAACTAT
CATACGGGTATTCTCTGTCCCCGACGGGCGCAAGCTTTACCAGTTCCGGC
GAGGGTCGATACCATCCAGAATCTACAGCATGTCTTTCAACACCACCTCG
ACTCTCCTTTGTGTATCTTCTTCCACGGAAACGATCCACTTATTCAAATT
AAGCCTTCAATCACAGTCACCGGACGCCACACCATCCTCTTCACTTACAG
CCGCTGATCGAAGGTCTAGCCAAAGCTCATTGGGGCAATTATCTGACGCC
GATGACAGGGTTGGAGATATGGGCTCCTCCGAGCTTGCGTCGAGGAAACA
CAATGGAACTCTGATGGGCATGATCCGGCGCACCTCACAAAATGTTGGCA
GCACATTTGCTGCCAAGGTTGGAGGCTACCTCCCCAAGGGAGTCAGCGAG
ATGTGGGAGCCCGCCCGAGACTTCGCTTGGATCAAACTACCAAAATCTAA
CCCAGGGCCCGGAGCAAATGGGAACAACGGCCCGTTGCGCAGTGTGGTCG
CTATGAGCGCCAACACTCCCCAGGTTATGGTGGTGACTAGCGACGGCAAC
TTTTATGTGTTCAACATCGATCTCTCCAAGGGTGGTGAGGGGACGTTGAC
TAAACAATACTCCGCCAATCCACGATATGCGAATTGACTTTTCCCACGAC
CGTGCTGGCAGTGAAGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGG
ACCAGATTTACCTCTATGATATCCAGACAATGAAGCTCCTGTATACCATC
GAGACCTCTCCCAATCCCAACGCGACTTCCAAGGGGTTTCGCATCTTCAC
CACGGACCCTTTCGCGAAAAGCTATGAGACGAAGGAAGGGAATATTGCCA
TCATTGAGATGCTATTCTCGACGTCCCTGGTTGCGCTGATACTATCACCA
CGTCGCCTTCAAATAACTAATACCAAGATGTCGATGAACTTCGTGACGTT
TAACCAGGACTATAGCTACCTAGCTGTGGTGTGCTCGATACAAATGACCG
CCTGGGTTACTCCGTGATGGACTATTAACACTATGTGCCCTCTCCCCATC
CTCCGATAACTGCTATCTGGCATACCCTCTGCCGCAAAAGGCACCGCCCT
CTACGTTCCAACCTCCAGCTCACGCTCCTCCGGGGACGACTCATGTTACA
CCTACAAGTGGCGAGGTCTTGATCTTTGATACTTTAAAGCTGGAAGCGAT
CAACGTTATTGAAGCGCATCGGTCTCCGCTAGCGTGCATCACGTTGAACA
GTGATGGAACCCTTATAGCCACGGCATCGGACAAGGGAACTATCATACGG
GTATTCTCTGTCCCCGACGGGCGCAAGCTTTACCAGTTCCGGCGAGGGTC
GATACCATCCAGAATCTACAGCATGTCTTTCAACACCACCTCGACTCTCC
TTTGTGTATCTTCTTCCACGGAAACGATCCACTTATTCAAATTAAGCCTT
CAATCACAGTCACCGGACGCCACACCATCCTCTTCACTTACAGCCGCTGA
TCGAAGGTCTAGCCAAAGCTCATTGGGGCAATTATCTGACGCCGATGACA
GGGTTGGAGATATGGGCTCCTCCGAGCTTGCGTCGAGGAAACACAATGGA
ACTCTGATGGGCATGATCCGGCGCACCTCACAAAATGTTGGCAGCACATT
TGCTGCCAAGGTTGGAGGCTACCTCCCCAAGGGAGTCAGCGAGATGTGGG
AGCCCGCCCGAGACTTCGCTTGGATCAAACTACCAAAATCTAACCCAGGG
CCCGGAGCAAATGGGAACAACGGCCCGTTGCGCAGTGTGGTCGCTATGAG
CGCCAACACTCCCCAGGTTATGGTGGTGACTAGCGACGGCAACTTTTATG
TGTTCAACATCGATCTCTCCAAGGGTGGTGAGGGGACGTTGACTAAACAA
TACTCCGCCAATCCACGATATGCGAATTGACTTTTCCCACGACCGTGCTG
GCAGTGAAGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAGAT
TTACCTCTATGATATCCAGACAATGAAGCTCCTGTATACCATCGAGACCT
CTCCCAATCCCAACGCGACTTCCAAGGGGTTTCGCATCTTCACCACGGAC
CCTTTCGCGAAAAGCTATGAGACGAAGGAAGGGAATATTGCCATCATTGA
GATGCTATTCTCGACGTCCCTGGTTGCGCTGATACTATCACCACGTCGCC
TTCAAATAACTAATACCAAGATGTCGATGAACTTCGTGACGTTTAACCAG
GACTATAGCTACCTAGCTGTGGTGTGCTCGATACAAATGACCGCCTGGGT
TACTCCGTGATGGACTATTAACACTATGTGCCCTCTCCCCATCCTCCGAT
AACTGCTATCTGGCATACCCTCTGCCGCAAAAGGCACCGCCCTCTACGTT
CCAACCTCCAGCTCACGCTCCTCCGGGGACGACTCATGTTACACCTACAA
GTGGCGAGGTCTTGATCTTTGATACTTTAAAGCTGGAAGCGATCAACGTT
ATTGAAGCGCATCGGTCTCCGCTAGCGTGCATCACGTTGAACAGTGATGG
AACCCTTATAGCCACGGCATCGGACAAGGGAACTATCATACGGGTATTCT
CTGTCCCCGACGGGCGCAAGCTTTACCAGTTCCGGCGAGGGTCGATACCA
TCCAGAATCTACAGCATGTCTTTCAACACCACCTCGACTCTCCTTTGTGT
ATCTTCTTCCACGGAAACGATCCACTTATTCAAATTAAGCCTTCAATCAC
AGTCACCGGACGCCACACCATCCTCTTCACTTACAGCCGCTGATCGAAGG
TCTAGCCAAAGCTCATTGGGGCAATTATCTGACGCCGATGACAGGGTTGG
AGATATGGGCTCCTCCGAGCTTGCGTCGAGGAAACACAATGGAACTCTGA
TGGGCATGATCCGGCGCACCTCACAAAATGTTGGCAGCACATTTGCTGCC
AAGGTTGGAGGCTACCTCCCCAAGGGAGTCAGCGAGATGTGGGAGCCCGC
CCGAGACTTCGCTTGGATCAAACTACCAAAATCTAACCCAGGGCCCGGAG
CAAATGGGAACAACGGCCCGTTGCGCAGTGTGGTCGCTATGAGCGCCAAC
ACTCCCCAGGTTATGGTGGTGACTAGCGACGGCAACTTTTATGTGTTCAA
CATCGATCTCTCCAAGGGTGGTGAGGGGACGTTGACTAAACAATACTCCG
CCAATCCACGATATGCGAATTGACTTTTCCCACGACCGTGCTGGCAGTGA
AGCTGAACCGGAAACGGCTTGTCATTGTGCTGGAGGACCAGATTTACCTC
TATGATATCCAGACAATGAAGCTCCTGTATACCATCGAGACCTCTCCCAA
TCCCAACGCGACTTCCAAGGGGTTTCGCATCTTCACCACGGACCCTTTCG
CGAAAAGCTATGAGACGAAGGAAGGGAATATTGCCATCATTGAGATGCTA
TTCTCGACGTCCCTGGTTGCGCTGATACTATCACCACGTCGCCTTCAAAT
AACTAATACCAAGATGTCGATGAACTTCGTGACGTTTAACCAGGACTATA
GCTACCTAGCTGTGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG18ATCC10864_006329Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006329-T1ATCC10864_006329-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006329-T1.cdsATCC10864_006329-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006329-T1.exon5ATCC10864_006329-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_006329-T1.exon4ATCC10864_006329-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006329-T1.exon3ATCC10864_006329-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006329-T1.exon2ATCC10864_006329-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006329-T1.exon1ATCC10864_006329-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001680
InterProIPR015943
InterProIPR036322
Properties
Property NameValue
Productautophagy protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:181532..183133 -
Powered by Drupal