You are here

Home

ATCC10864_006364-T1, ATCC10864_006364-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006364-T1
Unique NameATCC10864_006364-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:303824..305695+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006364-T1 ID=ATCC10864_006364-T1|Name=ATCC10864_006364-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1872bp|location=Sequence derived from alignment at MCQH01000166:303824..305695+ (Aspergillus niger ATCC 10864)
ATGGCTGCCTCCTCCACAGGTGATCCCAGGATAACTACCAAGTCAGAACA
AGGTGCCAACAGTTCTGCGCAAGGCCAGCATGCGGCCAACACTGAAGTCA
ACAATGAATTGCCAGAAACGAACCCAAACGCGATGCACGGTTTTAAGCTC
TTTGCCATTTTTGTAGGCATATGCTTCGGCGCGTTTCTGATGTCATTGGA
TATTTTCATCATCGCAACTGTACTACTCCGACCCCCTTTATCTATGTTGT
AGTTGACCACGGCTAGGCCATTCCATCCATTACAGCCGACTTCCATGATA
CCGCCCAACTGGCCTGGTATCCAGCTGCGTACTCGCTCACAACATGCGCA
TTGACTCCGTTGGCAGGCAAGCTGAGCTCAATGTTTCCGCTCCGTTGGAT
CTATGTATCCTTCTTCTCCATATTCCTGATCGGCAGCCTCGTGTGCGGCT
TTGCGCCAAACAGCAACACCTTCATCGCGGGTCGCGCAATCGCAGGTATC
GGGGCATCCGGTGTCGCAAGCGGCGGCTTTGTTATCGTCCTGACTGTATC
TCCCGAAAAATCGAAACCAGTGTTACTCGGTATATGCAGCAGCTGCTTTG
CCATGGGCCTTATCCTAGCACCCGTCATTGGTGGAGCATTTACGCAATAT
GCTACTTGGCGGTGGTGTTTCTGGGTTAATCTTCCTCCTGGTGCTCTGAC
ATTGCTGGCGATGCTGTGCTTTTTCAGGCCTCCGTCAATACAGCGCGACC
GGACTGCTGTCCAACGGATCATCGACTTGGATCTCATCGGTTGTGCCATT
TTCATTCCGGGTATCTTTATGCTTCTCCTTGCTATGATGTGGGGCGGTAC
AAAAGAGTCGTGGGACTCAGCGACGACCATTGGTCTGTTTGTAGGATCTG
CAGTCATGCTTATCATCTTTGTTTCCTGGGAAGGCTACAAGGGTGAAGAC
GCAATGATACCGGGGAATATTGTGGCCAGACGGACAATCACCTTCAGTGT
CGTGTTCTCATTTTTTCATTTCGGCTCTGTCGGTATTATGAATTACTATC
TTCCTGAGTGGTTCCAGGTAGTGGAAGGCGCCAGTCCGTTGGAAAGTGGC
ACGCGAACTCTGGCTTCGGTGCTCGCTCAAATAGTCGGGACCCTTTCTGC
TGGATTTCTAGGTATGATGCCCCACGGTAGCTGCTATCTTGAAATGGCAG
TTAAGCACAAGCTAACACTAAGCATTGGCAGCACGCAAAATACACTACTA
CAACCCTTGGCTGTACATCGGCCCCCTCTTCATGTGCACTGCAGCAGCAC
TATACACACACTTCTCGACCTTTCACACCCCGTCCAGCCACTGGATCGGC
TTCCAAGTCATTCAGGGTCTTGGTGTCGGCATGGCACAGCAAATGCCATC
GCTCATCATCCAGCATTCTGTGCGCGACAAACCAGAGCTCATGCCGGCCG
CGATATCTCTGAACCTATTCTTCCAGTACTTAGGGGCCACTATCACGCAA
TCCCTTGGCGGTATCGTATTTCGCTCAATCCTACTCCCGGAATTGGCAGA
CCATGCTGGTTTGAATGCTGATCAAATCGCGCTGGTGTCCGCTGCTGGAA
TGGCGGATGTACGTGATACCGTTGACAAATATTTTCCCAATATGTTAGAT
CTCGTTCTGGAAGCTTATAATAAGGCTATTACTTCAACTTTTGTGAGTGA
TCCTCTCTATGCAGCCACTGTGATGAAAGTGGCACTAATCAAATGGGCAT
GTTAGTATGTTGCTGTTGGGACTACAGCTGCGGCGTTCTGCTTGGCTTTT
GGGGTAAAGTGGGAGAGGATTACTGAGAAAGCGACAAATGGTGCGGCAGA
GGGCGTAGCTGAAGAGAAGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000166:303824..305695+

>ATCC10864_006364-T1 ID=ATCC10864_006364-T1|Name=ATCC10864_006364-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6768bp|location=Sequence derived from alignment at MCQH01000166:303824..305695+ (Aspergillus niger ATCC 10864)
ATGGCTGCCTCCTCCACAGGTGATCCCAGGATAACTACCAAGTCAGAACA
AGGTGCCAACAGTTCTGCGCAAGGCCAGCATGCGGCCAACACTGAAGTCA
ACAATGAATTGCCAGAAACGAACCCAAACGCGATGCACGGTTTTAAGCTC
TTTGCCATTTTTGTAGGCATATGCTTCGGCGCGTTTCTGATGTCATTGGA
TATTTTCATCATCGCAACTGCCATTCCATCCATTACAGCCGACTTCCATG
ATACCGCCCAACTGGCCTGGTATCCAGCTGCGTACTCGCTCACAACATGC
GCATTGACTCCGTTGGCAGGCAAGCTGAGCTCAATGTTTCCGCTCCGTTG
GATCTATGTATCCTTCTTCTCCATATTCCTGATCGGCAGCCTCGTGTGCG
GCTTTGCGCCAAACAGCAACACCTTCATCGCGGGTCGCGCAATCGCAGGT
ATCGGGGCATCCGGTGTCGCAAGCGGCGGCTTTGTTATCGTCCTGACTGT
ATCTCCCGAAAAATCGAAACCAGTGTTACTCGGTATATGCAGCAGCTGCT
TTGCCATGGGCCTTATCCTAGCACCCGTCATTGGTGGAGCATTTACGCAA
TATGCTACTTGGCGGTGGTGTTTCTGGGTTAATCTTCCTCCTGGTGCTCT
GACATTGCTGGCGATGCTGTGCTTTTTCAGGCCTCCGTCAATACAGCGCG
ACCGGACTGCTGTCCAACGGATCATCGACTTGGATCTCATCGGTTGTGCC
ATTTTCATTCCGGGTATCTTTATGCTTCTCCTTGCTATGATGTGGGGCGG
TACAAAAGAGTCGTGGGACTCAGCGACGACCATTGGTCTGTTTGTAGGAT
CTGCAGTCATGCTTATCATCTTTGTTTCCTGGGAAGGCTACAAGGGTGAA
GACGCAATGATACCGGGGAATATTGTGGCCAGACGGACAATCACCTTCAG
TGTCGTGTTCTCATTTTTTCATTTCGGCTCTGTCGGTATTATGAATTACT
ATCTTCCTGAGTGGTTCCAGGTAGTGGAAGGCGCCAGTCCGTTGGAAAGT
GGCACGCGAACTCTGGCTTCGGTGCTCGCTCAAATAGTCGGGACCCTTTC
TGCTGGATTTCTAGCACGCAAAATACACTACTACAACCCTTGGCTGTACA
TCGGCCCCCTCTTCATGTGCACTGCAGCAGCACTATACACACACTTCTCG
ACCTTTCACACCCCGTCCAGCCACTGGATCGGCTTCCAAGTCATTCAGGG
TCTTGGTGTCGGCATGGCACAGCAAATGCCATCGCTCATCATCCAGCATT
CTGTGCGCGACAAACCAGAGCTCATGCCGGCCGCGATATCTCTGAACCTA
TTCTTCCAGTACTTAGGGGCCACTATCACGCAATCCCTTGGCGGTATCGT
ATTTCGCTCAATCCTACTCCCGGAATTGGCAGACCATGCTGGTTTGAATG
CTGATCAAATCGCGCTGGTGTCCGCTGCTGGAATGGCGGATGTACGTGAT
ACCGTTGACAAATATTTTCCCAATATGTTAGATCTCGTTCTGGAAGCTTA
TAATAAGGCTATTACTTCAACTTTTTATGTTGCTGTTGGGACTACAGCTG
CGGCGTTCTGCTTGGCTTTTGGGGTAAAGTGGGAGAGGATTACTGAGAAA
GCGACAAATGGTGCGGCAGAGGGCGTAGCTGAAGAGAAGTAGATGGCTGC
CTCCTCCACAGGTGATCCCAGGATAACTACCAAGTCAGAACAAGGTGCCA
ACAGTTCTGCGCAAGGCCAGCATGCGGCCAACACTGAAGTCAACAATGAA
TTGCCAGAAACGAACCCAAACGCGATGCACGGTTTTAAGCTCTTTGCCAT
TTTTGTAGGCATATGCTTCGGCGCGTTTCTGATGTCATTGGATATTTTCA
TCATCGCAACTGCCATTCCATCCATTACAGCCGACTTCCATGATACCGCC
CAACTGGCCTGGTATCCAGCTGCGTACTCGCTCACAACATGCGCATTGAC
TCCGTTGGCAGGCAAGCTGAGCTCAATGTTTCCGCTCCGTTGGATCTATG
TATCCTTCTTCTCCATATTCCTGATCGGCAGCCTCGTGTGCGGCTTTGCG
CCAAACAGCAACACCTTCATCGCGGGTCGCGCAATCGCAGGTATCGGGGC
ATCCGGTGTCGCAAGCGGCGGCTTTGTTATCGTCCTGACTGTATCTCCCG
AAAAATCGAAACCAGTGTTACTCGGTATATGCAGCAGCTGCTTTGCCATG
GGCCTTATCCTAGCACCCGTCATTGGTGGAGCATTTACGCAATATGCTAC
TTGGCGGTGGTGTTTCTGGGTTAATCTTCCTCCTGGTGCTCTGACATTGC
TGGCGATGCTGTGCTTTTTCAGGCCTCCGTCAATACAGCGCGACCGGACT
GCTGTCCAACGGATCATCGACTTGGATCTCATCGGTTGTGCCATTTTCAT
TCCGGGTATCTTTATGCTTCTCCTTGCTATGATGTGGGGCGGTACAAAAG
AGTCGTGGGACTCAGCGACGACCATTGGTCTGTTTGTAGGATCTGCAGTC
ATGCTTATCATCTTTGTTTCCTGGGAAGGCTACAAGGGTGAAGACGCAAT
GATACCGGGGAATATTGTGGCCAGACGGACAATCACCTTCAGTGTCGTGT
TCTCATTTTTTCATTTCGGCTCTGTCGGTATTATGAATTACTATCTTCCT
GAGTGGTTCCAGGTAGTGGAAGGCGCCAGTCCGTTGGAAAGTGGCACGCG
AACTCTGGCTTCGGTGCTCGCTCAAATAGTCGGGACCCTTTCTGCTGGAT
TTCTAGCACGCAAAATACACTACTACAACCCTTGGCTGTACATCGGCCCC
CTCTTCATGTGCACTGCAGCAGCACTATACACACACTTCTCGACCTTTCA
CACCCCGTCCAGCCACTGGATCGGCTTCCAAGTCATTCAGGGTCTTGGTG
TCGGCATGGCACAGCAAATGCCATCGCTCATCATCCAGCATTCTGTGCGC
GACAAACCAGAGCTCATGCCGGCCGCGATATCTCTGAACCTATTCTTCCA
GTACTTAGGGGCCACTATCACGCAATCCCTTGGCGGTATCGTATTTCGCT
CAATCCTACTCCCGGAATTGGCAGACCATGCTGGTTTGAATGCTGATCAA
ATCGCGCTGGTGTCCGCTGCTGGAATGGCGGATGTACGTGATACCGTTGA
CAAATATTTTCCCAATATGTTAGATCTCGTTCTGGAAGCTTATAATAAGG
CTATTACTTCAACTTTTTATGTTGCTGTTGGGACTACAGCTGCGGCGTTC
TGCTTGGCTTTTGGGGTAAAGTGGGAGAGGATTACTGAGAAAGCGACAAA
TGGTGCGGCAGAGGGCGTAGCTGAAGAGAAGTAGATGGCTGCCTCCTCCA
CAGGTGATCCCAGGATAACTACCAAGTCAGAACAAGGTGCCAACAGTTCT
GCGCAAGGCCAGCATGCGGCCAACACTGAAGTCAACAATGAATTGCCAGA
AACGAACCCAAACGCGATGCACGGTTTTAAGCTCTTTGCCATTTTTGTAG
GCATATGCTTCGGCGCGTTTCTGATGTCATTGGATATTTTCATCATCGCA
ACTGCCATTCCATCCATTACAGCCGACTTCCATGATACCGCCCAACTGGC
CTGGTATCCAGCTGCGTACTCGCTCACAACATGCGCATTGACTCCGTTGG
CAGGCAAGCTGAGCTCAATGTTTCCGCTCCGTTGGATCTATGTATCCTTC
TTCTCCATATTCCTGATCGGCAGCCTCGTGTGCGGCTTTGCGCCAAACAG
CAACACCTTCATCGCGGGTCGCGCAATCGCAGGTATCGGGGCATCCGGTG
TCGCAAGCGGCGGCTTTGTTATCGTCCTGACTGTATCTCCCGAAAAATCG
AAACCAGTGTTACTCGGTATATGCAGCAGCTGCTTTGCCATGGGCCTTAT
CCTAGCACCCGTCATTGGTGGAGCATTTACGCAATATGCTACTTGGCGGT
GGTGTTTCTGGGTTAATCTTCCTCCTGGTGCTCTGACATTGCTGGCGATG
CTGTGCTTTTTCAGGCCTCCGTCAATACAGCGCGACCGGACTGCTGTCCA
ACGGATCATCGACTTGGATCTCATCGGTTGTGCCATTTTCATTCCGGGTA
TCTTTATGCTTCTCCTTGCTATGATGTGGGGCGGTACAAAAGAGTCGTGG
GACTCAGCGACGACCATTGGTCTGTTTGTAGGATCTGCAGTCATGCTTAT
CATCTTTGTTTCCTGGGAAGGCTACAAGGGTGAAGACGCAATGATACCGG
GGAATATTGTGGCCAGACGGACAATCACCTTCAGTGTCGTGTTCTCATTT
TTTCATTTCGGCTCTGTCGGTATTATGAATTACTATCTTCCTGAGTGGTT
CCAGGTAGTGGAAGGCGCCAGTCCGTTGGAAAGTGGCACGCGAACTCTGG
CTTCGGTGCTCGCTCAAATAGTCGGGACCCTTTCTGCTGGATTTCTAGCA
CGCAAAATACACTACTACAACCCTTGGCTGTACATCGGCCCCCTCTTCAT
GTGCACTGCAGCAGCACTATACACACACTTCTCGACCTTTCACACCCCGT
CCAGCCACTGGATCGGCTTCCAAGTCATTCAGGGTCTTGGTGTCGGCATG
GCACAGCAAATGCCATCGCTCATCATCCAGCATTCTGTGCGCGACAAACC
AGAGCTCATGCCGGCCGCGATATCTCTGAACCTATTCTTCCAGTACTTAG
GGGCCACTATCACGCAATCCCTTGGCGGTATCGTATTTCGCTCAATCCTA
CTCCCGGAATTGGCAGACCATGCTGGTTTGAATGCTGATCAAATCGCGCT
GGTGTCCGCTGCTGGAATGGCGGATGTACGTGATACCGTTGACAAATATT
TTCCCAATATGTTAGATCTCGTTCTGGAAGCTTATAATAAGGCTATTACT
TCAACTTTTTATGTTGCTGTTGGGACTACAGCTGCGGCGTTCTGCTTGGC
TTTTGGGGTAAAGTGGGAGAGGATTACTGAGAAAGCGACAAATGGTGCGG
CAGAGGGCGTAGCTGAAGAGAAGTAGATGGCTGCCTCCTCCACAGGTGAT
CCCAGGATAACTACCAAGTCAGAACAAGGTGCCAACAGTTCTGCGCAAGG
CCAGCATGCGGCCAACACTGAAGTCAACAATGAATTGCCAGAAACGAACC
CAAACGCGATGCACGGTTTTAAGCTCTTTGCCATTTTTGTAGGCATATGC
TTCGGCGCGTTTCTGATGTCATTGGATATTTTCATCATCGCAACTGCCAT
TCCATCCATTACAGCCGACTTCCATGATACCGCCCAACTGGCCTGGTATC
CAGCTGCGTACTCGCTCACAACATGCGCATTGACTCCGTTGGCAGGCAAG
CTGAGCTCAATGTTTCCGCTCCGTTGGATCTATGTATCCTTCTTCTCCAT
ATTCCTGATCGGCAGCCTCGTGTGCGGCTTTGCGCCAAACAGCAACACCT
TCATCGCGGGTCGCGCAATCGCAGGTATCGGGGCATCCGGTGTCGCAAGC
GGCGGCTTTGTTATCGTCCTGACTGTATCTCCCGAAAAATCGAAACCAGT
GTTACTCGGTATATGCAGCAGCTGCTTTGCCATGGGCCTTATCCTAGCAC
CCGTCATTGGTGGAGCATTTACGCAATATGCTACTTGGCGGTGGTGTTTC
TGGGTTAATCTTCCTCCTGGTGCTCTGACATTGCTGGCGATGCTGTGCTT
TTTCAGGCCTCCGTCAATACAGCGCGACCGGACTGCTGTCCAACGGATCA
TCGACTTGGATCTCATCGGTTGTGCCATTTTCATTCCGGGTATCTTTATG
CTTCTCCTTGCTATGATGTGGGGCGGTACAAAAGAGTCGTGGGACTCAGC
GACGACCATTGGTCTGTTTGTAGGATCTGCAGTCATGCTTATCATCTTTG
TTTCCTGGGAAGGCTACAAGGGTGAAGACGCAATGATACCGGGGAATATT
GTGGCCAGACGGACAATCACCTTCAGTGTCGTGTTCTCATTTTTTCATTT
CGGCTCTGTCGGTATTATGAATTACTATCTTCCTGAGTGGTTCCAGGTAG
TGGAAGGCGCCAGTCCGTTGGAAAGTGGCACGCGAACTCTGGCTTCGGTG
CTCGCTCAAATAGTCGGGACCCTTTCTGCTGGATTTCTAGCACGCAAAAT
ACACTACTACAACCCTTGGCTGTACATCGGCCCCCTCTTCATGTGCACTG
CAGCAGCACTATACACACACTTCTCGACCTTTCACACCCCGTCCAGCCAC
TGGATCGGCTTCCAAGTCATTCAGGGTCTTGGTGTCGGCATGGCACAGCA
AATGCCATCGCTCATCATCCAGCATTCTGTGCGCGACAAACCAGAGCTCA
TGCCGGCCGCGATATCTCTGAACCTATTCTTCCAGTACTTAGGGGCCACT
ATCACGCAATCCCTTGGCGGTATCGTATTTCGCTCAATCCTACTCCCGGA
ATTGGCAGACCATGCTGGTTTGAATGCTGATCAAATCGCGCTGGTGTCCG
CTGCTGGAATGGCGGATGTACGTGATACCGTTGACAAATATTTTCCCAAT
ATGTTAGATCTCGTTCTGGAAGCTTATAATAAGGCTATTACTTCAACTTT
TTATGTTGCTGTTGGGACTACAGCTGCGGCGTTCTGCTTGGCTTTTGGGG
TAAAGTGGGAGAGGATTACTGAGAAAGCGACAAATGGTGCGGCAGAGGGC
GTAGCTGAAGAGAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006364ATCC10864_006364Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006364-T1.exon1ATCC10864_006364-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006364-T1.exon2ATCC10864_006364-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006364-T1.exon3ATCC10864_006364-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006364-T1.exon4ATCC10864_006364-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006364-T1.cdsATCC10864_006364-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006364-T1ATCC10864_006364-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07690
InterProIPR036259
InterProIPR020846
PFAMPF06609
InterProIPR011701
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:303824..305695 +
Powered by Drupal