You are here

Home

ATCC10864_006382-T1, ATCC10864_006382-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006382-T1
Unique NameATCC10864_006382-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:374842..376329-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006382-T1 ID=ATCC10864_006382-T1|Name=ATCC10864_006382-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1488bp|location=Sequence derived from alignment at MCQH01000166:374842..376329- (Aspergillus niger ATCC 10864)
ATGTCGCTCTCAGCTTTGGGCACTCTAGTGGACATCCAGAGCCCGCCATT
AATAACGAGTCCTGCGGCGGCGGTGCGCAAGGATAAGCAAGGGATTGCTT
ATGCTCCATCGGACCATGAACTAGAAGGCCTTCAGCGACGCAGTCAACAG
ACCGCTGATATCTCCTCTCAGCAGACCCTGGGTTCGCAGACACCCGTGAG
CCCTGGTGAGTTGGAGAGCCATCCCACTTCGCCGGGAGAGGAAGCTGTGG
ACTCCATTCCCGCAATACAGAGTCCACCAATGACTAAATGGCGGCTGTTG
AGTGCCTGCTTGATGAACTTCGCCGGGGGACTGAACGACAGCGCACCTGG
GGCCCTCATCCCATACATGGAGAAAGACTACAATATTGGATATGCTATCG
TGTCGCTGATCTTTGTAACGAATGCGTTGGGATTCATTCTTGCTGCCCCT
TTGGTTCATGCGCTGGAAATGAAGCTTGGCCGGTCGAAGACTTATTCTTT
GTCAACAAGCTTGATAACCGCTGGTTATGTCATCATCATCTGCAAGCCAC
CCTTCCCTGCCGTCGTGGCCAGTTTCTTTCTATTAGGCCTCGGCATGGCC
ATCAACCTAGCCTTGAATAATGTCTTTTGCGCGAACCTTGTGAATAGCAC
TGCAGCCTTGGGTGGTCTCCATGGTGCTTATGGCTTGGGCGGCATCATAG
CACCACTTGTGGCGACGGCTTTGGCATCTCATGGGGTCCAATGGTCCTAC
TTCTACAGTATCAACCTCGCCATGTCGCTGATCAACCTGGTGTTCTCCGC
TTGGGCGTTCCAGAAATATGAAAAGGACTTCCCAACACAGTTATTGACGG
CGCTCCACCGTACCACTTCTCAGCAAACGCCTGGCCCAACCCAAGCGGCC
AGACCACACCTTCTGAAGCAAGCACTGAAGAGTCGACCCACTCTCCTTGG
GGCTCTATTTATCTTCGCCTACCAAGGGGCAGAAGTGTCGATTTCAGGCT
GGGTTGTCTCGTTCCTCATCAATTATCGTCATGGGGACCCCTCAAGGGTT
GGCTACGTTAGTGCCGGGTTCTGGGCTGGCATTACTGTTGGACGGTTCGT
CCTGTCGCATCCCGCCCACCTAGTCGGGGAGAAGCTATCCGTCATCCTAC
TGGTGCTCGGGTCAGTTGCCTTCCAGCTCATGACTTGGTTCATTCCCAAC
ATCATCGGGGACGCCGTGGCCGTGGCCGTAGTGGGTCTGCTACTGGGACC
AGTGTATCCTTGCGCCACGGTAGTGTTCAGCAAGCTACTGCCGCGCTCGA
TGCTGACGTCCAGTCTGAGCATTATCAGCGCCATGGGAAGCAGTGGGGGA
GCTGTGTCGCCGTTCTTCACCGGGCTTCTAGCTCAAACGGTGAGCACGTA
CGTCTTGCATCCGATATGCATTGGACTGTACGGTGTAATGCTCGTGGGGT
GGCTGTCTCTTCCTCGTATGTCGAAGAGATCCGAGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000166:374842..376329-

>ATCC10864_006382-T1 ID=ATCC10864_006382-T1|Name=ATCC10864_006382-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1488bp|location=Sequence derived from alignment at MCQH01000166:374842..376329- (Aspergillus niger ATCC 10864)
ATGTCGCTCTCAGCTTTGGGCACTCTAGTGGACATCCAGAGCCCGCCATT
AATAACGAGTCCTGCGGCGGCGGTGCGCAAGGATAAGCAAGGGATTGCTT
ATGCTCCATCGGACCATGAACTAGAAGGCCTTCAGCGACGCAGTCAACAG
ACCGCTGATATCTCCTCTCAGCAGACCCTGGGTTCGCAGACACCCGTGAG
CCCTGGTGAGTTGGAGAGCCATCCCACTTCGCCGGGAGAGGAAGCTGTGG
ACTCCATTCCCGCAATACAGAGTCCACCAATGACTAAATGGCGGCTGTTG
AGTGCCTGCTTGATGAACTTCGCCGGGGGACTGAACGACAGCGCACCTGG
GGCCCTCATCCCATACATGGAGAAAGACTACAATATTGGATATGCTATCG
TGTCGCTGATCTTTGTAACGAATGCGTTGGGATTCATTCTTGCTGCCCCT
TTGGTTCATGCGCTGGAAATGAAGCTTGGCCGGTCGAAGACTTATTCTTT
GTCAACAAGCTTGATAACCGCTGGTTATGTCATCATCATCTGCAAGCCAC
CCTTCCCTGCCGTCGTGGCCAGTTTCTTTCTATTAGGCCTCGGCATGGCC
ATCAACCTAGCCTTGAATAATGTCTTTTGCGCGAACCTTGTGAATAGCAC
TGCAGCCTTGGGTGGTCTCCATGGTGCTTATGGCTTGGGCGGCATCATAG
CACCACTTGTGGCGACGGCTTTGGCATCTCATGGGGTCCAATGGTCCTAC
TTCTACAGTATCAACCTCGCCATGTCGCTGATCAACCTGGTGTTCTCCGC
TTGGGCGTTCCAGAAATATGAAAAGGACTTCCCAACACAGTTATTGACGG
CGCTCCACCGTACCACTTCTCAGCAAACGCCTGGCCCAACCCAAGCGGCC
AGACCACACCTTCTGAAGCAAGCACTGAAGAGTCGACCCACTCTCCTTGG
GGCTCTATTTATCTTCGCCTACCAAGGGGCAGAAGTGTCGATTTCAGGCT
GGGTTGTCTCGTTCCTCATCAATTATCGTCATGGGGACCCCTCAAGGGTT
GGCTACGTTAGTGCCGGGTTCTGGGCTGGCATTACTGTTGGACGGTTCGT
CCTGTCGCATCCCGCCCACCTAGTCGGGGAGAAGCTATCCGTCATCCTAC
TGGTGCTCGGGTCAGTTGCCTTCCAGCTCATGACTTGGTTCATTCCCAAC
ATCATCGGGGACGCCGTGGCCGTGGCCGTAGTGGGTCTGCTACTGGGACC
AGTGTATCCTTGCGCCACGGTAGTGTTCAGCAAGCTACTGCCGCGCTCGA
TGCTGACGTCCAGTCTGAGCATTATCAGCGCCATGGGAAGCAGTGGGGGA
GCTGTGTCGCCGTTCTTCACCGGGCTTCTAGCTCAAACGGTGAGCACGTA
CGTCTTGCATCCGATATGCATTGGACTGTACGGTGTAATGCTCGTGGGGT
GGCTGTCTCTTCCTCGTATGTCGAAGAGATCCGAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006382ATCC10864_006382Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006382-T1.cdsATCC10864_006382-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006382-T1.exon1ATCC10864_006382-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006382-T1ATCC10864_006382-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:374842..376329 -
Powered by Drupal