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ATCC10864_006391-T1, ATCC10864_006391-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006391-T1
Unique NameATCC10864_006391-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:404120..405799+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006391-T1 ID=ATCC10864_006391-T1|Name=ATCC10864_006391-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1680bp|location=Sequence derived from alignment at MCQH01000166:404120..405799+ (Aspergillus niger ATCC 10864)
ATGGCAAGCCCGACATCAGCTCTGGACAGCCGGTTGCCTCGTCATGCATC
ATCGGGCCCTGTTAATAGTACCGTGACAGCCCTCCAAGGAGCCACAGCTG
CTTTCAATGCAAATCCTGCCAGCAGAGCACGGCCACCTATTATCCATTAT
AGGTCTGGCGCATTCATGGAGCCTGTAGGGGTCAGCCACAATACTCCTGA
AATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCT
CAGTCAAAGACAAGATCGGGAAGTTTAGTGCCTATCAGCAGCAGCCCTCT
GGCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAG
GTCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGA
CGCCAGGTGAAATCACTGCCACGCACACGGGCGTCAGCAGGACGCAAGGT
TCGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTT
GCTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGA
ACAAGCTCCTTCGCAGCGAGGCCGATTTGCCAATTAGAGACAAGTCAATT
CAGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGC
TGCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTG
CCACTGGTCCAACCTCAGTTCCTATCAACGTACATTCCAAAGGCCCAGAG
AGTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATAC
TACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTT
CGTCCGTGCCTCGGAAAGACCTGACAAATCATCGGCGGCTTTTAGACACC
AACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTA
TACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCG
GACTGGATGAAGGGGCCTTATCGGATGCGGTCGTGGCCTCGTCAAGGGCA
TCTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGA
GCGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGG
GAGAACACACAGATTCATCTAGTCCATCCACACATTTACGACAGACCCTC
CGGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAA
GCATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAA
GATGGCGGAGTGAGATTACGGAGAAAGAGCGAAAGCGGTACGAGGGTGTC
TGGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCC
CGAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCG
CTGACATCTGGTCACGTAGTCGCCTGCCGCGACATGTTCTAGCACAAGTA
TGGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATT
TGTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCC
CACCCAGGGTGCCCGCCAGTGTGTGGGGAAGCGCCAAGCGGATATCAGGA
GTGCACATTCATGGGCTTCCTCCTGCCTGA
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Coding sequence (CDS) from alignment at MCQH01000166:404120..405799+

>ATCC10864_006391-T1 ID=ATCC10864_006391-T1|Name=ATCC10864_006391-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1680bp|location=Sequence derived from alignment at MCQH01000166:404120..405799+ (Aspergillus niger ATCC 10864)
ATGGCAAGCCCGACATCAGCTCTGGACAGCCGGTTGCCTCGTCATGCATC
ATCGGGCCCTGTTAATAGTACCGTGACAGCCCTCCAAGGAGCCACAGCTG
CTTTCAATGCAAATCCTGCCAGCAGAGCACGGCCACCTATTATCCATTAT
AGGTCTGGCGCATTCATGGAGCCTGTAGGGGTCAGCCACAATACTCCTGA
AATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCT
CAGTCAAAGACAAGATCGGGAAGTTTAGTGCCTATCAGCAGCAGCCCTCT
GGCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAG
GTCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGA
CGCCAGGTGAAATCACTGCCACGCACACGGGCGTCAGCAGGACGCAAGGT
TCGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTT
GCTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGA
ACAAGCTCCTTCGCAGCGAGGCCGATTTGCCAATTAGAGACAAGTCAATT
CAGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGC
TGCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTG
CCACTGGTCCAACCTCAGTTCCTATCAACGTACATTCCAAAGGCCCAGAG
AGTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATAC
TACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTT
CGTCCGTGCCTCGGAAAGACCTGACAAATCATCGGCGGCTTTTAGACACC
AACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTA
TACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCG
GACTGGATGAAGGGGCCTTATCGGATGCGGTCGTGGCCTCGTCAAGGGCA
TCTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGA
GCGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGG
GAGAACACACAGATTCATCTAGTCCATCCACACATTTACGACAGACCCTC
CGGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAA
GCATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAA
GATGGCGGAGTGAGATTACGGAGAAAGAGCGAAAGCGGTACGAGGGTGTC
TGGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCC
CGAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCG
CTGACATCTGGTCACGTAGTCGCCTGCCGCGACATGTTCTAGCACAAGTA
TGGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATT
TGTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCC
CACCCAGGGTGCCCGCCAGTGTGTGGGGAAGCGCCAAGCGGATATCAGGA
GTGCACATTCATGGGCTTCCTCCTGCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IRS4ATCC10864_006391Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006391-T1.exon1ATCC10864_006391-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006391-T1.cdsATCC10864_006391-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006391-T1ATCC10864_006391-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000261
PFAMPF12763
InterProIPR011992
Properties
Property NameValue
ProductIncreased rDNA silencing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:404120..405799 +
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