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ATCC10864_006401-T1, ATCC10864_006401-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006401-T1
Unique NameATCC10864_006401-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:435213..436285+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006401-T1 ID=ATCC10864_006401-T1|Name=ATCC10864_006401-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1073bp|location=Sequence derived from alignment at MCQH01000166:435213..436285+ (Aspergillus niger ATCC 10864)
ATGTCTGACGTCGCTGAGACCAAGCCCGACCCCACCACCAGCGCTCCTGA
GGGCGCTGAGAAGCCCGAGGAGACGACCACCACCGCCACCGAAGAGACCA
AGACTGAGGAGAAGCCCGAGGAGTCCAAGTCGGTGACCGAGTCCGCTGCC
GAGGCCGTCAAGGACACTGCCACCAAGACCACCGACAGCGTCTTCTCCAT
GTTCGGCGGTGGCCCCAAGAAGGAGAAGCAGGAGGAGCCTGAGGATGCTA
AGGACGAGCCCTCCGGCTCTTCCAAGGCCCAGAAGGGTGAAGATGAGGTA
TGCATTTGATTTGCGCTATGTCGGTGTCGATGGTCCCCTTACGCCAGTTT
AACCGTTACCCCGCTTTCCCCTCCATCGATGCCCTCTTTTTCCTCTTACC
CCTGATTCTTTGTCCGCATTTTGTTGGCTCCTGCAAAGTATCACGACAGC
CCAGTTATATTGGCTACTAGTGGCTAACCATGTCATCACAATTATTAGGA
CGAGGCCCCCGAGTCCCCTGATGTTCACTTCGAGCCTGTCATCCGCTTGA
CCGAGAAGGTGGAGACCAAGACCAACGAGGAGCTGGAGGAGCAGACCTTC
AAGATGCGTGCCAAGCTTTTCAAATTCGACCGTGACAGCAAGGAGTGGAA
GGAGCGTGGTACCGGTGACGTCCGCCTGCTCAAGCACAAGGAGAACCAGA
AGACCCGCCTCGTGATGCGCCGCGACAAGACCCTCAAGGTCTGCGCTAAC
CACTACAGTGAGTGTTGCCGTTTATCATTTGGTGTGGATTTGGGTCGCTA
ATCGATCTTCCAGTCGTTCCCGATATGAAGTTGAGCCCCAACGTTGGCAG
TGACCGCAGCTGGGTTTGGAACGCTACCGCCGATGTCAGTGAGGGTGAGC
CCGAGGCGCAGACCCTGGCCATCCGTTTTGCCAACAGTGACAGTAAGTGG
ACATTGAAATACAGCCAGGGTGAAGGTTCATTTTGCTAACGCCAAATCTT
AGACGCCAATCTCTTCAAGGAGGCTTTCGAGAAGGCCCAGAAAGAGAACG
AGAAGCTGCTTAACCTGCAGTAA
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Coding sequence (CDS) from alignment at MCQH01000166:435213..436285+

>ATCC10864_006401-T1 ID=ATCC10864_006401-T1|Name=ATCC10864_006401-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3024bp|location=Sequence derived from alignment at MCQH01000166:435213..436285+ (Aspergillus niger ATCC 10864)
ATGTCTGACGTCGCTGAGACCAAGCCCGACCCCACCACCAGCGCTCCTGA
GGGCGCTGAGAAGCCCGAGGAGACGACCACCACCGCCACCGAAGAGACCA
AGACTGAGGAGAAGCCCGAGGAGTCCAAGTCGGTGACCGAGTCCGCTGCC
GAGGCCGTCAAGGACACTGCCACCAAGACCACCGACAGCGTCTTCTCCAT
GTTCGGCGGTGGCCCCAAGAAGGAGAAGCAGGAGGAGCCTGAGGATGCTA
AGGACGAGCCCTCCGGCTCTTCCAAGGCCCAGAAGGGTGAAGATGAGGAC
GAGGCCCCCGAGTCCCCTGATGTTCACTTCGAGCCTGTCATCCGCTTGAC
CGAGAAGGTGGAGACCAAGACCAACGAGGAGCTGGAGGAGCAGACCTTCA
AGATGCGTGCCAAGCTTTTCAAATTCGACCGTGACAGCAAGGAGTGGAAG
GAGCGTGGTACCGGTGACGTCCGCCTGCTCAAGCACAAGGAGAACCAGAA
GACCCGCCTCGTGATGCGCCGCGACAAGACCCTCAAGGTCTGCGCTAACC
ACTACATCGTTCCCGATATGAAGTTGAGCCCCAACGTTGGCAGTGACCGC
AGCTGGGTTTGGAACGCTACCGCCGATGTCAGTGAGGGTGAGCCCGAGGC
GCAGACCCTGGCCATCCGTTTTGCCAACAGTGACAACGCCAATCTCTTCA
AGGAGGCTTTCGAGAAGGCCCAGAAAGAGAACGAGAAGCTGCTTAACCTG
CAGTAAATGTCTGACGTCGCTGAGACCAAGCCCGACCCCACCACCAGCGC
TCCTGAGGGCGCTGAGAAGCCCGAGGAGACGACCACCACCGCCACCGAAG
AGACCAAGACTGAGGAGAAGCCCGAGGAGTCCAAGTCGGTGACCGAGTCC
GCTGCCGAGGCCGTCAAGGACACTGCCACCAAGACCACCGACAGCGTCTT
CTCCATGTTCGGCGGTGGCCCCAAGAAGGAGAAGCAGGAGGAGCCTGAGG
ATGCTAAGGACGAGCCCTCCGGCTCTTCCAAGGCCCAGAAGGGTGAAGAT
GAGGACGAGGCCCCCGAGTCCCCTGATGTTCACTTCGAGCCTGTCATCCG
CTTGACCGAGAAGGTGGAGACCAAGACCAACGAGGAGCTGGAGGAGCAGA
CCTTCAAGATGCGTGCCAAGCTTTTCAAATTCGACCGTGACAGCAAGGAG
TGGAAGGAGCGTGGTACCGGTGACGTCCGCCTGCTCAAGCACAAGGAGAA
CCAGAAGACCCGCCTCGTGATGCGCCGCGACAAGACCCTCAAGGTCTGCG
CTAACCACTACATCGTTCCCGATATGAAGTTGAGCCCCAACGTTGGCAGT
GACCGCAGCTGGGTTTGGAACGCTACCGCCGATGTCAGTGAGGGTGAGCC
CGAGGCGCAGACCCTGGCCATCCGTTTTGCCAACAGTGACAACGCCAATC
TCTTCAAGGAGGCTTTCGAGAAGGCCCAGAAAGAGAACGAGAAGCTGCTT
AACCTGCAGTAAATGTCTGACGTCGCTGAGACCAAGCCCGACCCCACCAC
CAGCGCTCCTGAGGGCGCTGAGAAGCCCGAGGAGACGACCACCACCGCCA
CCGAAGAGACCAAGACTGAGGAGAAGCCCGAGGAGTCCAAGTCGGTGACC
GAGTCCGCTGCCGAGGCCGTCAAGGACACTGCCACCAAGACCACCGACAG
CGTCTTCTCCATGTTCGGCGGTGGCCCCAAGAAGGAGAAGCAGGAGGAGC
CTGAGGATGCTAAGGACGAGCCCTCCGGCTCTTCCAAGGCCCAGAAGGGT
GAAGATGAGGACGAGGCCCCCGAGTCCCCTGATGTTCACTTCGAGCCTGT
CATCCGCTTGACCGAGAAGGTGGAGACCAAGACCAACGAGGAGCTGGAGG
AGCAGACCTTCAAGATGCGTGCCAAGCTTTTCAAATTCGACCGTGACAGC
AAGGAGTGGAAGGAGCGTGGTACCGGTGACGTCCGCCTGCTCAAGCACAA
GGAGAACCAGAAGACCCGCCTCGTGATGCGCCGCGACAAGACCCTCAAGG
TCTGCGCTAACCACTACATCGTTCCCGATATGAAGTTGAGCCCCAACGTT
GGCAGTGACCGCAGCTGGGTTTGGAACGCTACCGCCGATGTCAGTGAGGG
TGAGCCCGAGGCGCAGACCCTGGCCATCCGTTTTGCCAACAGTGACAACG
CCAATCTCTTCAAGGAGGCTTTCGAGAAGGCCCAGAAAGAGAACGAGAAG
CTGCTTAACCTGCAGTAAATGTCTGACGTCGCTGAGACCAAGCCCGACCC
CACCACCAGCGCTCCTGAGGGCGCTGAGAAGCCCGAGGAGACGACCACCA
CCGCCACCGAAGAGACCAAGACTGAGGAGAAGCCCGAGGAGTCCAAGTCG
GTGACCGAGTCCGCTGCCGAGGCCGTCAAGGACACTGCCACCAAGACCAC
CGACAGCGTCTTCTCCATGTTCGGCGGTGGCCCCAAGAAGGAGAAGCAGG
AGGAGCCTGAGGATGCTAAGGACGAGCCCTCCGGCTCTTCCAAGGCCCAG
AAGGGTGAAGATGAGGACGAGGCCCCCGAGTCCCCTGATGTTCACTTCGA
GCCTGTCATCCGCTTGACCGAGAAGGTGGAGACCAAGACCAACGAGGAGC
TGGAGGAGCAGACCTTCAAGATGCGTGCCAAGCTTTTCAAATTCGACCGT
GACAGCAAGGAGTGGAAGGAGCGTGGTACCGGTGACGTCCGCCTGCTCAA
GCACAAGGAGAACCAGAAGACCCGCCTCGTGATGCGCCGCGACAAGACCC
TCAAGGTCTGCGCTAACCACTACATCGTTCCCGATATGAAGTTGAGCCCC
AACGTTGGCAGTGACCGCAGCTGGGTTTGGAACGCTACCGCCGATGTCAG
TGAGGGTGAGCCCGAGGCGCAGACCCTGGCCATCCGTTTTGCCAACAGTG
ACAACGCCAATCTCTTCAAGGAGGCTTTCGAGAAGGCCCAGAAAGAGAAC
GAGAAGCTGCTTAACCTGCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0046907intracellular transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SBP1ATCC10864_006401Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006401-T1.exon1ATCC10864_006401-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006401-T1.exon2ATCC10864_006401-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006401-T1.exon3ATCC10864_006401-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006401-T1.exon4ATCC10864_006401-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006401-T1.cdsATCC10864_006401-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006401-T1ATCC10864_006401-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000156
PFAMPF00638
InterProIPR011993
Properties
Property NameValue
NoteBUSCO:EOG09264XT5
Productsingle stranded nucleic acid binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:435213..436285 +
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