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ATCC10864_006436-T1, ATCC10864_006436-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006436-T1
Unique NameATCC10864_006436-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:545134..547175+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006436-T1 ID=ATCC10864_006436-T1|Name=ATCC10864_006436-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2042bp|location=Sequence derived from alignment at MCQH01000166:545134..547175+ (Aspergillus niger ATCC 10864)
ATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCCGA
CCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATGGG
GATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAGAG
GACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTTGC
TGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGGCGTG
CTGAGATCTTGCAGTTCGCTATGTAAGTAGGTGGTCTGCTGGTAGCAATG
GTGGGCAATTGCGCTAATTGATTTGTTGCGGGGTGAAGGCAGGCGCATAT
GGAAGCTTTGTTCGCTTTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATA
CCCCTCGCCAGGCGGAGACTTCGATGTCGGCGTTCCTGAAACAGGTTGCG
CCGCTTGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGA
GGCCGCTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGA
ACTTCAATGCCGCTGCGAATAAATTGCTCAACTCGGCGACGCGATTGGAA
GAAGAGGTCGCTTCGGAGACGAAGTACTGGGATGAAGTATTGGCGGTTAA
GGAGAAGGGATGGAAGGTCTGCAGGTTGCCCCGGGAGAGAACTGCGCTGG
GAGTACAATATGGGTTCTTGGAAGGTAGGATGGCTACGTGCTTTGCTGGA
TTGATGCTGACTGTGTTCCTATAGCTACGCCTATATTCCGCGACCGGGGT
CTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTAATACTGGATAAGGG
ACTGGCACCACAGAAAACGAGGACGGTTCGAGTGCGTGTGAAGCACCGCG
GACAACTTACGGGATGCTCTAAAATGCCGGATCCGATCCCCGATGCAGCG
TCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACAGTGTACGAGGAAGA
GCTATTCCACGAGTTGATGCGCGAAGCGCGTATCATGGGAAGTCATGGTG
TGACGACTCGTCAGAACCTGGTCCGACTGCCGATATCCGAGGACCAAGAG
ATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACGCCCGACGAAGACAA
GATCGAGTCAACAGAACACGATGTCCTTGCTAATGGGCTCTCGCACTCAA
TTCGGATCCTGCTCGCGTATGCACACCGCCAGAACCTGCGACGCAGAACC
CAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTTACCCCCGAGTATCA
GCTCCTACGCCCTGTCATGGCGTATCTCCAACACAGCTCGCACGTCCGCT
GGTTGGAGTCTTTCATGAATGATATATACCGGGTTCTGCGGGCGGCAGGG
ATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGAA
GGTGCAGGCTGTTCCGAAGGTAGAGAGTCTGGTACAACAGTTCCTGATGC
CCTTCGAATCGACATTTTCCGGCCATCTGATCACCCCTCAAAGCTCTTTT
CGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCATTTGGCACCCACTA
CGACATTTCCATTGACCTACCTCACCACCCCGAAGTTCAGCCTCCCGGTC
GGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCATGCATTTCGTCAAG
TTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCGAAGACGACCAAAAA
TACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGACGTGGGAGGCGGCAT
ATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAAG
AAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAAGTGGAAACATTTTC
ACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGGCCCCAAGGCACCAA
GTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAGATTCTAAGCCTGGT
CTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAGTCATAA
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Coding sequence (CDS) from alignment at MCQH01000166:545134..547175+

>ATCC10864_006436-T1 ID=ATCC10864_006436-T1|Name=ATCC10864_006436-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5778bp|location=Sequence derived from alignment at MCQH01000166:545134..547175+ (Aspergillus niger ATCC 10864)
ATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCCGA
CCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATGGG
GATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAGAG
GACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTTGC
TGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGGCGTG
CTGAGATCTTGCAGTTCGCTATGCAGGCGCATATGGAAGCTTTGTTCGCT
TTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATACCCCTCGCCAGGCGGA
GACTTCGATGTCGGCGTTCCTGAAACAGGTTGCGCCGCTTGGGTCGTTGA
ATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGAGGCCGCTGTGCAGGAT
GTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGAACTTCAATGCCGCTGC
GAATAAATTGCTCAACTCGGCGACGCGATTGGAAGAAGAGGTCGCTTCGG
AGACGAAGTACTGGGATGAAGTATTGGCGGTTAAGGAGAAGGGATGGAAG
GTCTGCAGGTTGCCCCGGGAGAGAACTGCGCTGGGAGTACAATATGGGTT
CTTGGAAGCTACGCCTATATTCCGCGACCGGGGTCTTGCTGCTCTACGGA
GGGCTGATAATGGAAGCTTAATACTGGATAAGGGACTGGCACCACAGAAA
ACGAGGACGGTTCGAGTGCGTGTGAAGCACCGCGGACAACTTACGGGATG
CTCTAAAATGCCGGATCCGATCCCCGATGCAGCGTCGGTCGAGCGCAGGA
TTTTGCAAGCACGCGACACAGTGTACGAGGAAGAGCTATTCCACGAGTTG
ATGCGCGAAGCGCGTATCATGGGAAGTCATGGTGTGACGACTCGTCAGAA
CCTGGTCCGACTGCCGATATCCGAGGACCAAGAGATCCTGCTGGATCTGG
TAGATGCGGACCGTGAAACGCCCGACGAAGACAAGATCGAGTCAACAGAA
CACGATGTCCTTGCTAATGGGCTCTCGCACTCAATTCGGATCCTGCTCGC
GTATGCACACCGCCAGAACCTGCGACGCAGAACCCAACCGCCGCCCCCGC
TCTCCCAGAAACGTCGGCTTACCCCCGAGTATCAGCTCCTACGCCCTGTC
ATGGCGTATCTCCAACACAGCTCGCACGTCCGCTGGTTGGAGTCTTTCAT
GAATGATATATACCGGGTTCTGCGGGCGGCAGGGATCGAGCGTGATTTCC
ACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGAAGGTGCAGGCTGTTCCG
AAGGTAGAGAGTCTGGTACAACAGTTCCTGATGCCCTTCGAATCGACATT
TTCCGGCCATCTGATCACCCCTCAAAGCTCTTTTCGCGTGAAAATCCGCA
CCAACCCGGTGTCGCCGCCATTTGGCACCCACTACGACATTTCCATTGAC
CTACCTCACCACCCCGAAGTTCAGCCTCCCGGTCGGGTTGGACTGCAGAA
TGAAGCAGCTGCAGCTCTCATGCATTTCGTCAAGTTGGACATCGTGTCGG
CCATCGCGCTCCAGGGCTCGAAGACGACCAAAAATACCACCAAGAAAGAA
GGCGCCGAGGGGACTTTGACGTGGGAGGCGGCATATCCGCACCACGGCGA
ACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAAGAAGCTGAAAATCAGCC
TGTCACGGGAGGAATTGAAAGTGGAAACATTTTCACTTCGGGGACTTGAA
GGGTTTGGCCGATCGGGCGGCCCCAAGGCACCAAGTTTGCAGTCTCAGAC
GTGGACAGCCACTCAGACAGATTCTAAGCCTGGTCTGATGGATTTTGTCG
CGGAGGTTTCGCGGGAGCAGTCATAAATGTCCGACTCATTCAGCCTCCCC
CTGCGCCCGCTCACCGAGAAGCCCGACCGCCCCGATACCCTTCCAATCGA
GATCGCCCAAATCAACGCCCGATGGGGATCTTTCCGCGACGTGAACGAAG
AGACACTGCTCGCCAAGATCGAAGAGGACAAGAACCGGGACCCATGGGAA
GAGGAAGATGAGGACGAAAAACTTGCTGAGGATGTGGACTCAACCGAGCG
TCTGGAAACATTGTACAAGCGGCGTGCTGAGATCTTGCAGTTCGCTATGC
AGGCGCATATGGAAGCTTTGTTCGCTTTGGATTTTGTTTCCCTTTTGCTT
TCGAAGCATACCCCTCGCCAGGCGGAGACTTCGATGTCGGCGTTCCTGAA
ACAGGTTGCGCCGCTTGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGC
CGAAGTCGGAGGCCGCTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGG
AGGGCGCAGAACTTCAATGCCGCTGCGAATAAATTGCTCAACTCGGCGAC
GCGATTGGAAGAAGAGGTCGCTTCGGAGACGAAGTACTGGGATGAAGTAT
TGGCGGTTAAGGAGAAGGGATGGAAGGTCTGCAGGTTGCCCCGGGAGAGA
ACTGCGCTGGGAGTACAATATGGGTTCTTGGAAGCTACGCCTATATTCCG
CGACCGGGGTCTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTAATAC
TGGATAAGGGACTGGCACCACAGAAAACGAGGACGGTTCGAGTGCGTGTG
AAGCACCGCGGACAACTTACGGGATGCTCTAAAATGCCGGATCCGATCCC
CGATGCAGCGTCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACAGTGT
ACGAGGAAGAGCTATTCCACGAGTTGATGCGCGAAGCGCGTATCATGGGA
AGTCATGGTGTGACGACTCGTCAGAACCTGGTCCGACTGCCGATATCCGA
GGACCAAGAGATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACGCCCG
ACGAAGACAAGATCGAGTCAACAGAACACGATGTCCTTGCTAATGGGCTC
TCGCACTCAATTCGGATCCTGCTCGCGTATGCACACCGCCAGAACCTGCG
ACGCAGAACCCAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTTACCC
CCGAGTATCAGCTCCTACGCCCTGTCATGGCGTATCTCCAACACAGCTCG
CACGTCCGCTGGTTGGAGTCTTTCATGAATGATATATACCGGGTTCTGCG
GGCGGCAGGGATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCTGTGA
GCCTTCCGAAGGTGCAGGCTGTTCCGAAGGTAGAGAGTCTGGTACAACAG
TTCCTGATGCCCTTCGAATCGACATTTTCCGGCCATCTGATCACCCCTCA
AAGCTCTTTTCGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCATTTG
GCACCCACTACGACATTTCCATTGACCTACCTCACCACCCCGAAGTTCAG
CCTCCCGGTCGGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCATGCA
TTTCGTCAAGTTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCGAAGA
CGACCAAAAATACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGACGTGG
GAGGCGGCATATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTGCTGG
CCAAAGCAAGAAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAAGTGG
AAACATTTTCACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGGCCCC
AAGGCACCAAGTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAGATTC
TAAGCCTGGTCTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAGTCAT
AAATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCC
GACCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATG
GGGATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAG
AGGACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTT
GCTGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGGCG
TGCTGAGATCTTGCAGTTCGCTATGCAGGCGCATATGGAAGCTTTGTTCG
CTTTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATACCCCTCGCCAGGCG
GAGACTTCGATGTCGGCGTTCCTGAAACAGGTTGCGCCGCTTGGGTCGTT
GAATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGAGGCCGCTGTGCAGG
ATGTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGAACTTCAATGCCGCT
GCGAATAAATTGCTCAACTCGGCGACGCGATTGGAAGAAGAGGTCGCTTC
GGAGACGAAGTACTGGGATGAAGTATTGGCGGTTAAGGAGAAGGGATGGA
AGGTCTGCAGGTTGCCCCGGGAGAGAACTGCGCTGGGAGTACAATATGGG
TTCTTGGAAGCTACGCCTATATTCCGCGACCGGGGTCTTGCTGCTCTACG
GAGGGCTGATAATGGAAGCTTAATACTGGATAAGGGACTGGCACCACAGA
AAACGAGGACGGTTCGAGTGCGTGTGAAGCACCGCGGACAACTTACGGGA
TGCTCTAAAATGCCGGATCCGATCCCCGATGCAGCGTCGGTCGAGCGCAG
GATTTTGCAAGCACGCGACACAGTGTACGAGGAAGAGCTATTCCACGAGT
TGATGCGCGAAGCGCGTATCATGGGAAGTCATGGTGTGACGACTCGTCAG
AACCTGGTCCGACTGCCGATATCCGAGGACCAAGAGATCCTGCTGGATCT
GGTAGATGCGGACCGTGAAACGCCCGACGAAGACAAGATCGAGTCAACAG
AACACGATGTCCTTGCTAATGGGCTCTCGCACTCAATTCGGATCCTGCTC
GCGTATGCACACCGCCAGAACCTGCGACGCAGAACCCAACCGCCGCCCCC
GCTCTCCCAGAAACGTCGGCTTACCCCCGAGTATCAGCTCCTACGCCCTG
TCATGGCGTATCTCCAACACAGCTCGCACGTCCGCTGGTTGGAGTCTTTC
ATGAATGATATATACCGGGTTCTGCGGGCGGCAGGGATCGAGCGTGATTT
CCACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGAAGGTGCAGGCTGTTC
CGAAGGTAGAGAGTCTGGTACAACAGTTCCTGATGCCCTTCGAATCGACA
TTTTCCGGCCATCTGATCACCCCTCAAAGCTCTTTTCGCGTGAAAATCCG
CACCAACCCGGTGTCGCCGCCATTTGGCACCCACTACGACATTTCCATTG
ACCTACCTCACCACCCCGAAGTTCAGCCTCCCGGTCGGGTTGGACTGCAG
AATGAAGCAGCTGCAGCTCTCATGCATTTCGTCAAGTTGGACATCGTGTC
GGCCATCGCGCTCCAGGGCTCGAAGACGACCAAAAATACCACCAAGAAAG
AAGGCGCCGAGGGGACTTTGACGTGGGAGGCGGCATATCCGCACCACGGC
GAACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAAGAAGCTGAAAATCAG
CCTGTCACGGGAGGAATTGAAAGTGGAAACATTTTCACTTCGGGGACTTG
AAGGGTTTGGCCGATCGGGCGGCCCCAAGGCACCAAGTTTGCAGTCTCAG
ACGTGGACAGCCACTCAGACAGATTCTAAGCCTGGTCTGATGGATTTTGT
CGCGGAGGTTTCGCGGGAGCAGTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SRB4ATCC10864_006436Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006436-T1.exon1ATCC10864_006436-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006436-T1.exon2ATCC10864_006436-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006436-T1.exon3ATCC10864_006436-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006436-T1.cdsATCC10864_006436-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006436-T1ATCC10864_006436-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF10156
InterProIPR019313
Properties
Property NameValue
ProductRNA polymerase II mediator complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:545134..547175 +
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