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ATCC10864_006508-T1, ATCC10864_006508-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006508-T1
Unique NameATCC10864_006508-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:696243..696789+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006508-T1 ID=ATCC10864_006508-T1|Name=ATCC10864_006508-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=547bp|location=Sequence derived from alignment at MCQH01000166:696243..696789+ (Aspergillus niger ATCC 10864)
ATGGGTGACGGAAACACGTTTGACAACAGAGACAACACAGTTCACAACCA GGCTGGTAGTCAGGTTGTTTATGGCAGTATTTACAATAATACTTTCTATG CCTATGAGCAAGGTATATTATTCGATCAAGCTCCTAATTACTACACTAGC ACTGACTTCCATGGTCACAGATGGCGTGCAGCATATTGCTGAGGATAAGG TAGACAAATGAATCGTTCAACACCCATAAATATTACACAGACTAATATAT CATCTCTTATCTCAGTCCCATCTCGATCAGAAGCTCCTAGAAGCAGCCGG GAAAGGGGAAACTGCGAAAGTGAAGCATCTACTGGACAACGGGGCAAACG CTTCGGCCGTGGATTCGCAAGGCCAGACAGTGCTTCACGTCGCTGCATCC GGGGGACACGATGATATTATCAGCATTCTCTTGAGGCGAGGGGCCGACAA GCATGCAAGAAACCGCTCTAATCACCGTCCCTCGGAGCTCGCCAGGTTGC TTGGTCATATTCCCCTGGCGAACAAATTGGAGCTGAACTTGCTTTGA
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Coding sequence (CDS) from alignment at MCQH01000166:696243..696789+

>ATCC10864_006508-T1 ID=ATCC10864_006508-T1|Name=ATCC10864_006508-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1269bp|location=Sequence derived from alignment at MCQH01000166:696243..696789+ (Aspergillus niger ATCC 10864)
ATGGGTGACGGAAACACGTTTGACAACAGAGACAACACAGTTCACAACCA
GGCTGGTAGTCAGGTTGTTTATGGCAGTATTTACAATAATACTTTCTATG
CCTATGAGCAAGATGGCGTGCAGCATATTGCTGAGGATAAGTCCCATCTC
GATCAGAAGCTCCTAGAAGCAGCCGGGAAAGGGGAAACTGCGAAAGTGAA
GCATCTACTGGACAACGGGGCAAACGCTTCGGCCGTGGATTCGCAAGGCC
AGACAGTGCTTCACGTCGCTGCATCCGGGGGACACGATGATATTATCAGC
ATTCTCTTGAGGCGAGGGGCCGACAAGCATGCAAGAAACCGCTCTAATCA
CCGTCCCTCGGAGCTCGCCAGGTTGCTTGGTCATATTCCCCTGGCGAACA
AATTGGAGCTGAACTTGCTTTGAATGGGTGACGGAAACACGTTTGACAAC
AGAGACAACACAGTTCACAACCAGGCTGGTAGTCAGGTTGTTTATGGCAG
TATTTACAATAATACTTTCTATGCCTATGAGCAAGATGGCGTGCAGCATA
TTGCTGAGGATAAGTCCCATCTCGATCAGAAGCTCCTAGAAGCAGCCGGG
AAAGGGGAAACTGCGAAAGTGAAGCATCTACTGGACAACGGGGCAAACGC
TTCGGCCGTGGATTCGCAAGGCCAGACAGTGCTTCACGTCGCTGCATCCG
GGGGACACGATGATATTATCAGCATTCTCTTGAGGCGAGGGGCCGACAAG
CATGCAAGAAACCGCTCTAATCACCGTCCCTCGGAGCTCGCCAGGTTGCT
TGGTCATATTCCCCTGGCGAACAAATTGGAGCTGAACTTGCTTTGAATGG
GTGACGGAAACACGTTTGACAACAGAGACAACACAGTTCACAACCAGGCT
GGTAGTCAGGTTGTTTATGGCAGTATTTACAATAATACTTTCTATGCCTA
TGAGCAAGATGGCGTGCAGCATATTGCTGAGGATAAGTCCCATCTCGATC
AGAAGCTCCTAGAAGCAGCCGGGAAAGGGGAAACTGCGAAAGTGAAGCAT
CTACTGGACAACGGGGCAAACGCTTCGGCCGTGGATTCGCAAGGCCAGAC
AGTGCTTCACGTCGCTGCATCCGGGGGACACGATGATATTATCAGCATTC
TCTTGAGGCGAGGGGCCGACAAGCATGCAAGAAACCGCTCTAATCACCGT
CCCTCGGAGCTCGCCAGGTTGCTTGGTCATATTCCCCTGGCGAACAAATT
GGAGCTGAACTTGCTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006508ATCC10864_006508Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006508-T1.exon1ATCC10864_006508-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006508-T1.exon2ATCC10864_006508-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006508-T1.exon3ATCC10864_006508-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006508-T1.cdsATCC10864_006508-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006508-T1ATCC10864_006508-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12796
PFAMPF13606
PFAMPF00023
InterProIPR039323
InterProIPR020683
InterProIPR036770
PFAMPF13857
InterProIPR002110
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:696243..696789 +