|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000166:723378..724095+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_006519-T1 ID=ATCC10864_006519-T1|Name=ATCC10864_006519-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=718bp|location=Sequence derived from alignment at MCQH01000166:723378..724095+ (Aspergillus niger ATCC 10864)
ATGATGTACACGTTCATGTTGACCTGGGTGACGATTGCACCCACCTCCAA
AGATCGAGACGACCCCGGTAACTTTTCCTACTACAGCATGAACAATTACG
ACTGGGTCCGCTTCTTGCCCGCGAGTATCGTCAATGTGTGCCTACTCCCT
TTGATCATCTTTACCTTTGCGCGCTCGACTGGCGGCTATGTCAATCCGAG
TATTACATTCGCTGCGTACTTTCTTCGCCGGATAACTTTAACACGGGCTG
CGATGTATGTTGGTGGACAGGTTATTGGAATTGTCCTGGCAGTGTGGGCT
GTGCAAGAAGCATACGGTAGCACAGGGTTTGATATAGGGTGTATCATCAG
TCGTGGAGGGGTTTCGATACGCAACGCATATATTGCTGAGGTTGTTAGCG
GCTTTGCTATGGTGGTGACTGTCATGTACATTGCTGCTGGTCGCAAATCC
GGAGTATTATTTGGAGATGCGATGTCGCCTTGGATGGTGGGCATTGCCAC
CGAGGCGGCGTTCTGGTTGTCGAGACTCATATGGCAGGGCCATCCCGGTG
CGAGTAGGTCATTGTGACATGCATTGTGGGAGGCTATCTGGGGTTGCAGC
TGCTAACAGCCACATAGGATCTAATGCTGCCCTTTTAGTTGAGTATTTAC
ATGGAATCTCGTTCTTTGATGAGGATGGTAGTCTCGCTGCGGCCTATGGG
GCAGAGTCGTTGAGTTGA back to topCoding sequence (CDS) from alignment at MCQH01000166:723378..724095+ >ATCC10864_006519-T1 ID=ATCC10864_006519-T1|Name=ATCC10864_006519-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1308bp|location=Sequence derived from alignment at MCQH01000166:723378..724095+ (Aspergillus niger ATCC 10864)
ATGATGTACACGTTCATGTTGACCTGGGTGACGATTGCACCCACCTCCAA
AGATCGAGACGACCCCGGTAACTTTTCCTACTACAGCATGAACAATTACG
ACTGGGTCCGCTTCTTGCCCGCGAGTATCGTCAATGTGTGCCTACTCCCT
TTGATCATCTTTACCTTTGCGCGCTCGACTGGCGGCTATGTCAATCCGAG
TATTACATTCGCTGCGTACTTTCTTCGCCGGATAACTTTAACACGGGCTG
CGATGTATGTTGGTGGACAGGTTATTGGAATTGTCCTGGCAGTGTGGGCT
GTGCAAGAAGCATACGGTAGCACAGGGTTTGATATAGGGTGTATCATCAG
TCGTGGAGGGGTTTCGATACGCAACGCATATATTGCTGAGGTTGTTAGCG
GCTTTGCTATGGTGGTGACTGTCATGTACATTGCTGCTGGTCGCAAATCC
GGAGTATTATTTGGAGATGCGATGTCGCCTTGGATGGTGGGCATTGCCAC
CGAGGCGGCGTTCTGGTTGTCGAGACTCATATGGCAGGGCCATCCCGGTG
CGAGATCTAATGCTGCCCTTTTAGTTGAGTATTTACATGGAATCTCGTTC
TTTGATGAGGATGGTAGTCTCGCTGCGGCCTATGGGGCAGAGTCGTTGAG
TTGAATGATGTACACGTTCATGTTGACCTGGGTGACGATTGCACCCACCT
CCAAAGATCGAGACGACCCCGGTAACTTTTCCTACTACAGCATGAACAAT
TACGACTGGGTCCGCTTCTTGCCCGCGAGTATCGTCAATGTGTGCCTACT
CCCTTTGATCATCTTTACCTTTGCGCGCTCGACTGGCGGCTATGTCAATC
CGAGTATTACATTCGCTGCGTACTTTCTTCGCCGGATAACTTTAACACGG
GCTGCGATGTATGTTGGTGGACAGGTTATTGGAATTGTCCTGGCAGTGTG
GGCTGTGCAAGAAGCATACGGTAGCACAGGGTTTGATATAGGGTGTATCA
TCAGTCGTGGAGGGGTTTCGATACGCAACGCATATATTGCTGAGGTTGTT
AGCGGCTTTGCTATGGTGGTGACTGTCATGTACATTGCTGCTGGTCGCAA
ATCCGGAGTATTATTTGGAGATGCGATGTCGCCTTGGATGGTGGGCATTG
CCACCGAGGCGGCGTTCTGGTTGTCGAGACTCATATGGCAGGGCCATCCC
GGTGCGAGATCTAATGCTGCCCTTTTAGTTGAGTATTTACATGGAATCTC
GTTCTTTGATGAGGATGGTAGTCTCGCTGCGGCCTATGGGGCAGAGTCGT
TGAGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015267 | channel activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR034294 |
| PFAM | PF00230 |
| InterPro | IPR000425 |
| InterPro | IPR023271 |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1000166.2 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000166 | supercontig | MCQH01000166:723378..724095 + |
|
