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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000166:794682..796592- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_006543-T1 ID=ATCC10864_006543-T1|Name=ATCC10864_006543-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1911bp|location=Sequence derived from alignment at MCQH01000166:794682..796592- (Aspergillus niger ATCC 10864)
ATGCCTTTCGGTGATCGAGGTATGGAGAACGCGAGCAACCAGCCGCGGAT
CACCAGAAAACACTCTGGCTGCAAGCCTTGCCGGCGGCGAGGCAAAAAGG
TCAGTTGTCTTCAATCCTAGTAGAAGTTCAGGAGGAATTAATCCTGCTCA
TCGTCCTATCAGTGCGATGAATCAAAACCGCGTTGCCGAGCTTGCGCCCG
GCTATCCTTGGAATGTACCTATGGCATCGACTACAGCTTCCATAACATCA
CCCCGACGAAACTGCAGCGCCAGCCGACCACTCTGGCGGAAAGTCCCCGG
TCGGCTCTTCTTCCTTTGAGTTCTGTGCCGAGTAAGGTGGCCGTAGAGCT
TCGCCATCTGCCGAGGTCATGCATCTCCCATCAGCTCACGCGAGCCAGGA
TCGCTAGGTCTCTGGACTGCGGAGAAAATCTTGAAACATGCTACCTAAGC
CATTTCCAGAGGCATGTGCGCTATCTCCTTCCCGCATCCCCTTTGCCATC
TGCAACCGCAACCTTCCACTCCCCGTACCTTCGAGCTGCTGTCTTGTGCA
TCTCCGCGTCCAACCTCTCGATGTTGGATGCACAAGTACAGAGCCGTATC
CTCGTGGGAAGCCACCGTCAGTCTTCGTTTAGCCCACTGGTCAATAGCTT
ACATCACGCTAAAGCGCGGGACTATCATGACCGCGCGTTACAACTTTGTC
GCAAGGCGGACATGAGAGAGCTCTCAGACGATGCACCCGCTATTCTTACA
ACGCAAATTCTTCTTGCATACTACCATCACGCGTCGACCAACCATCAACG
CTTTCGGTCGGCGGTGTGGGATACTGTTGAATTTGTTTCTCGGAATAGGG
AGCACATCATGCGGTCCGCGAGGGGAGCGGAGGCCCTGCAAATGTGGCAT
CGCTTATGTGTTTCTCATCGTCTATCGAAGCCACCATCATTACTACTGGA
GGGTGAGGGCAGAAGCTCGTTCGGCCCAAACTGTTTTCCAGATGCCACCG
ACCATTTATACCTCACCGCCGTTCTGGGAATGAGTAGGGATGACCTGATC
TACGACATTCTTATCAAAACTATGGAGATCCGCTCGCGACTGGTAGTCTT
TCGCTGCGTTGCACACCGTTACGAGATCCCCGAATCGTCAAGAGAGGTTG
GCAGTCTCGCGCACAGTTTCTTGACCGAGATGTTAGGCAGGCCCTTTGTC
CTCGAGGAGCTTTCCGAGGCACGGAAAGGCTTTGTACGTGGCTCGCATCT
ACTGGGGCTGTTGCAGGTGCAGAAGGAACGGTTAGCTGTTTGGAGCTCTC
TCCGACATACGAAGCAATCACCTGTCGGTCGCTATGCTGACAGCCATCGT
GATACTATGCCTCCAAGGGAGTGGGACATCTCAACTCATCGAGATACGAT
GAACACCTTGTACCAGATACTTTGCGAGATGATGTTCGAAGAGGCCCGCG
CAGTGTATGCATCTGACGATGCATCGGAGCAACACTTTGCCGCGACGGTG
CTTCCTCGGCTGGCACAGAGTTTCTGCCACATTGTGAGCACCTTGGATTT
TGCTGCAGCAGGTACGGCCGATGTCTACACCTTCAGTCTGGCTGAAAGTC
TCCTCCAGTTGGTCGGTCTCTGGCAGTCAGATAGCTTATTTCACTTCATT
CTGGACGTTACGTGGCCGAATCTGGAGAGGAAAACGCGAGGATTTGAGCA
CTCGCACTATCCCACTCACCTCGTGAAGCGGATCATCTCCCTGGTAGCGG
ACTACTGGTCCCGGGGACAAAGCGTGACACTCGTATTACCTGCCGTTCCA
GAGGATATCGCTAAACTGACACTGCTTGACATCAATCACCCGATGAATGT
GGTGATCTGCGGACATGATCAGGACAATATCGCGTGGATTGACAAAATTC
GTCTCCCTTGA back to topCoding sequence (CDS) from alignment at MCQH01000166:794682..796592- >ATCC10864_006543-T1 ID=ATCC10864_006543-T1|Name=ATCC10864_006543-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3696bp|location=Sequence derived from alignment at MCQH01000166:794682..796592- (Aspergillus niger ATCC 10864)
TGCGATGAATCAAAACCGCGTTGCCGAGCTTGCGCCCGGCTATCCTTGGA
ATGTACCTATGGCATCGACTACAGCTTCCATAACATCACCCCGACGAAAC
TGCAGCGCCAGCCGACCACTCTGGCGGAAAGTCCCCGGTCGGCTCTTCTT
CCTTTGAGTTCTGTGCCGAGTAAGGTGGCCGTAGAGCTTCGCCATCTGCC
GAGGTCATGCATCTCCCATCAGCTCACGCGAGCCAGGATCGCTAGGTCTC
TGGACTGCGGAGAAAATCTTGAAACATGCTACCTAAGCCATTTCCAGAGG
CATGTGCGCTATCTCCTTCCCGCATCCCCTTTGCCATCTGCAACCGCAAC
CTTCCACTCCCCGTACCTTCGAGCTGCTGTCTTGTGCATCTCCGCGTCCA
ACCTCTCGATGTTGGATGCACAAGTACAGAGCCGTATCCTCGTGGGAAGC
CACCGTCAGTCTTCGTTTAGCCCACTGGTCAATAGCTTACATCACGCTAA
AGCGCGGGACTATCATGACCGCGCGTTACAACTTTGTCGCAAGGCGGACA
TGAGAGAGCTCTCAGACGATGCACCCGCTATTCTTACAACGCAAATTCTT
CTTGCATACTACCATCACGCGTCGACCAACCATCAACGCTTTCGGTCGGC
GGTGTGGGATACTGTTGAATTTGTTTCTCGGAATAGGGAGCACATCATGC
GGTCCGCGAGGGGAGCGGAGGCCCTGCAAATGTGGCATCGCTTATGTGTT
TCTCATCGTCTATCGAAGCCACCATCATTACTACTGGAGGGTGAGGGCAG
AAGCTCGTTCGGCCCAAACTGTTTTCCAGATGCCACCGACCATTTATACC
TCACCGCCGTTCTGGGAATGAGTAGGGATGACCTGATCTACGACATTCTT
ATCAAAACTATGGAGATCCGCTCGCGACTGGTAGTCTTTCGCTGCGTTGC
ACACCGTTACGAGATCCCCGAATCGTCAAGAGAGGTTGGCAGTCTCGCGC
ACAGTTTCTTGACCGAGATGTTAGGCAGGCCCTTTGTCCTCGAGGAGCTT
TCCGAGGCACGGAAAGGCTTTGTACGTGGCTCGCATCTACTGGGGCTGTT
GCAGGTGCAGAAGGAACGGTTAGCTGTTTGGAGCTCTCTCCGACATACGA
AGCAATCACCTGTCGGTCGCTATGCTGACAGCCATCGTGATACTATGCCT
CCAAGGGAGTGGGACATCTCAACTCATCGAGATACGATGAACACCTTGTA
CCAGATACTTTGCGAGATGATGTTCGAAGAGGCCCGCGCAGTGTATGCAT
CTGACGATGCATCGGAGCAACACTTTGCCGCGACGGTGCTTCCTCGGCTG
GCACAGAGTTTCTGCCACATTGTGAGCACCTTGGATTTTGCTGCAGCAGG
TACGGCCGATGTCTACACCTTCAGTCTGGCTGAAAGTCTCCTCCAGTTGG
TCGGTCTCTGGCAGTCAGATAGCTTATTTCACTTCATTCTGGACGTTACG
TGGCCGAATCTGGAGAGGAAAACGCGAGGATTTGAGCACTCGCACTATCC
CACTCACCTCGTGAAGCGGATCATCTCCCTGGTAGCGGACTACTGGTCCC
GGGGACAAAGCGTGACACTCGTATTACCTGCCGTTCCAGAGGATATCGCT
AAACTGACACTGCTTGACATCAATCACCCGATGAATGTGGTGATCTGCGG
ACATGATCAGGACAATATCGCGTGGATTGACAAAATTCGTCTCCCTTGAA
TGCCTTTCGGTGATCGAGGTATGGAGAACGCGAGCAACCAGCCGCGGATC
ACCAGAAAACACTCTGGCTGCAAGCCTTGCCGGCGGCGAGGCAAAAAGTG
CGATGAATCAAAACCGCGTTGCCGAGCTTGCGCCCGGCTATCCTTGGAAT
GTACCTATGGCATCGACTACAGCTTCCATAACATCACCCCGACGAAACTG
CAGCGCCAGCCGACCACTCTGGCGGAAAGTCCCCGGTCGGCTCTTCTTCC
TTTGAGTTCTGTGCCGAGTAAGGTGGCCGTAGAGCTTCGCCATCTGCCGA
GGTCATGCATCTCCCATCAGCTCACGCGAGCCAGGATCGCTAGGTCTCTG
GACTGCGGAGAAAATCTTGAAACATGCTACCTAAGCCATTTCCAGAGGCA
TGTGCGCTATCTCCTTCCCGCATCCCCTTTGCCATCTGCAACCGCAACCT
TCCACTCCCCGTACCTTCGAGCTGCTGTCTTGTGCATCTCCGCGTCCAAC
CTCTCGATGTTGGATGCACAAGTACAGAGCCGTATCCTCGTGGGAAGCCA
CCGTCAGTCTTCGTTTAGCCCACTGGTCAATAGCTTACATCACGCTAAAG
CGCGGGACTATCATGACCGCGCGTTACAACTTTGTCGCAAGGCGGACATG
AGAGAGCTCTCAGACGATGCACCCGCTATTCTTACAACGCAAATTCTTCT
TGCATACTACCATCACGCGTCGACCAACCATCAACGCTTTCGGTCGGCGG
TGTGGGATACTGTTGAATTTGTTTCTCGGAATAGGGAGCACATCATGCGG
TCCGCGAGGGGAGCGGAGGCCCTGCAAATGTGGCATCGCTTATGTGTTTC
TCATCGTCTATCGAAGCCACCATCATTACTACTGGAGGGTGAGGGCAGAA
GCTCGTTCGGCCCAAACTGTTTTCCAGATGCCACCGACCATTTATACCTC
ACCGCCGTTCTGGGAATGAGTAGGGATGACCTGATCTACGACATTCTTAT
CAAAACTATGGAGATCCGCTCGCGACTGGTAGTCTTTCGCTGCGTTGCAC
ACCGTTACGAGATCCCCGAATCGTCAAGAGAGGTTGGCAGTCTCGCGCAC
AGTTTCTTGACCGAGATGTTAGGCAGGCCCTTTGTCCTCGAGGAGCTTTC
CGAGGCACGGAAAGGCTTTGTACGTGGCTCGCATCTACTGGGGCTGTTGC
AGGTGCAGAAGGAACGGTTAGCTGTTTGGAGCTCTCTCCGACATACGAAG
CAATCACCTGTCGGTCGCTATGCTGACAGCCATCGTGATACTATGCCTCC
AAGGGAGTGGGACATCTCAACTCATCGAGATACGATGAACACCTTGTACC
AGATACTTTGCGAGATGATGTTCGAAGAGGCCCGCGCAGTGTATGCATCT
GACGATGCATCGGAGCAACACTTTGCCGCGACGGTGCTTCCTCGGCTGGC
ACAGAGTTTCTGCCACATTGTGAGCACCTTGGATTTTGCTGCAGCAGGTA
CGGCCGATGTCTACACCTTCAGTCTGGCTGAAAGTCTCCTCCAGTTGGTC
GGTCTCTGGCAGTCAGATAGCTTATTTCACTTCATTCTGGACGTTACGTG
GCCGAATCTGGAGAGGAAAACGCGAGGATTTGAGCACTCGCACTATCCCA
CTCACCTCGTGAAGCGGATCATCTCCCTGGTAGCGGACTACTGGTCCCGG
GGACAAAGCGTGACACTCGTATTACCTGCCGTTCCAGAGGATATCGCTAA
ACTGACACTGCTTGACATCAATCACCCGATGAATGTGGTGATCTGCGGAC
ATGATCAGGACAATATCGCGTGGATTGACAAAATTCGTCTCCCTTGAATG
CCTTTCGGTGATCGAGGTATGGAGAACGCGAGCAACCAGCCGCGGATCAC
CAGAAAACACTCTGGCTGCAAGCCTTGCCGGCGGCGAGGCAAAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR001138 |
| PFAM | PF00172 |
| InterPro | IPR036864 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000166 | supercontig | MCQH01000166:794682..796592 - |
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