You are here

Home

ATCC10864_006545-T1, ATCC10864_006545-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006545-T1
Unique NameATCC10864_006545-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000166:801302..802405+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006545-T1 ID=ATCC10864_006545-T1|Name=ATCC10864_006545-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1104bp|location=Sequence derived from alignment at MCQH01000166:801302..802405+ (Aspergillus niger ATCC 10864)
ATGTCCCTAACCACAGCTTTACAGCGGGTGCTTAATGGAGCTTTCAGAAA
CCTTTCTGAAAGCACACGGGAGACTCTACTTCTCTCCCTGCTCCCGAAAT
CCCTAGCCGCACTATTGGGTTACATTACACTGCGCCAAGTAAATAGAGCC
CTGAATGCATGGTCACTGAACAACTTAGCGAGCCGGCCGTGGCAGAATGA
CCAAGAGCTCGTCTTAGTCACAGGGGGGTGCAGCGGCATTGGGAAAGCAG
TGATGGAGGAGCTTGCTCAGCATGGCGCTAAAGTCATTATCCTTGATATC
CAGCAGCCGTCCTTCGAGCTTCGTAAGTTTCAATCGTATTACAAAATCAA
CAAACTAACTAATAACTAACACTCTCAGCCCCCGACGTCTTTTTCTATAA
GACTGACATCACTTCAACTGCTGCCCTACACGCAACAGCCAATGAAATTC
GTGCTGTACATGGACACCCAACAGTCCTTGTCAATAATGCTGGCGTATTG
CATTTTACTCCTATCCTCGACCAAACAGAAGCCGCTGTTCGCCAGACCTT
TGAGGTTAATACCATGGCCCATTACTGGACGGTGAAGGAGTTCCTCCCCG
CGATGATCGAGCGCAACCACGGCCATGTGGTCACTCTGGCTAGTATGGCC
AGCTTTCTGAGTGCGGGTAACATGGCTAGCTACGCCTGCTCAAAAGCAAG
TGCGCTAGCATTTCACGAAGCCATAGGCCAAGAATTGAAAGTTTGGTACA
ATGCCGATGGGGTTAAGACGAGGTAAGCATGCATTTCAGGCCGCCCCTGG
GAAGAATAATAGATGAATGCTAACAAATAGCGATAGTGTTTTCCATCCAC
TGTATGTGGGGACCCCCATGATCAAGCCCCTGATGAAGGGTGGAGCTCGC
TTTAAACGCCCTGTACTGGCAGTGGAAACGGTGAGCCACGCAATCAGCCA
ACAGATCCTGTCTGGGAAGAGTGGCCAAATAATTATACCGGGCAAGCTTT
GGTGGCTGAGTTTGCTGCGGGGATTTCCTACATGGCTGCAGGAGTCGATA
AGGCGCAGCAGCTCGCAGAGTGCGAAGAGACTCGGAGATAGCGGCAGAGC
GTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000166:801302..802405+

>ATCC10864_006545-T1 ID=ATCC10864_006545-T1|Name=ATCC10864_006545-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2952bp|location=Sequence derived from alignment at MCQH01000166:801302..802405+ (Aspergillus niger ATCC 10864)
ATGTCCCTAACCACAGCTTTACAGCGGGTGCTTAATGGAGCTTTCAGAAA
CCTTTCTGAAAGCACACGGGAGACTCTACTTCTCTCCCTGCTCCCGAAAT
CCCTAGCCGCACTATTGGGTTACATTACACTGCGCCAAGTAAATAGAGCC
CTGAATGCATGGTCACTGAACAACTTAGCGAGCCGGCCGTGGCAGAATGA
CCAAGAGCTCGTCTTAGTCACAGGGGGGTGCAGCGGCATTGGGAAAGCAG
TGATGGAGGAGCTTGCTCAGCATGGCGCTAAAGTCATTATCCTTGATATC
CAGCAGCCGTCCTTCGAGCTTCCCCCCGACGTCTTTTTCTATAAGACTGA
CATCACTTCAACTGCTGCCCTACACGCAACAGCCAATGAAATTCGTGCTG
TACATGGACACCCAACAGTCCTTGTCAATAATGCTGGCGTATTGCATTTT
ACTCCTATCCTCGACCAAACAGAAGCCGCTGTTCGCCAGACCTTTGAGGT
TAATACCATGGCCCATTACTGGACGGTGAAGGAGTTCCTCCCCGCGATGA
TCGAGCGCAACCACGGCCATGTGGTCACTCTGGCTAGTATGGCCAGCTTT
CTGAGTGCGGGTAACATGGCTAGCTACGCCTGCTCAAAAGCAAGTGCGCT
AGCATTTCACGAAGCCATAGGCCAAGAATTGAAAGTTTGGTACAATGCCG
ATGGGGTTAAGACGAGTGTTTTCCATCCACTGTATGTGGGGACCCCCATG
ATCAAGCCCCTGATGAAGGGTGGAGCTCGCTTTAAACGCCCTGTACTGGC
AGTGGAAACGGTGAGCCACGCAATCAGCCAACAGATCCTGTCTGGGAAGA
GTGGCCAAATAATTATACCGGGCAAGCTTTGGTGGCTGAGTTTGCTGCGG
GGATTTCCTACATGGCTGCAGGAGTCGATAAGGCGCAGCAGCTCGCAGAG
TGCGAAGAGACTCGGAGATAGCGGCAGAGCGTGAATGTCCCTAACCACAG
CTTTACAGCGGGTGCTTAATGGAGCTTTCAGAAACCTTTCTGAAAGCACA
CGGGAGACTCTACTTCTCTCCCTGCTCCCGAAATCCCTAGCCGCACTATT
GGGTTACATTACACTGCGCCAAGTAAATAGAGCCCTGAATGCATGGTCAC
TGAACAACTTAGCGAGCCGGCCGTGGCAGAATGACCAAGAGCTCGTCTTA
GTCACAGGGGGGTGCAGCGGCATTGGGAAAGCAGTGATGGAGGAGCTTGC
TCAGCATGGCGCTAAAGTCATTATCCTTGATATCCAGCAGCCGTCCTTCG
AGCTTCCCCCCGACGTCTTTTTCTATAAGACTGACATCACTTCAACTGCT
GCCCTACACGCAACAGCCAATGAAATTCGTGCTGTACATGGACACCCAAC
AGTCCTTGTCAATAATGCTGGCGTATTGCATTTTACTCCTATCCTCGACC
AAACAGAAGCCGCTGTTCGCCAGACCTTTGAGGTTAATACCATGGCCCAT
TACTGGACGGTGAAGGAGTTCCTCCCCGCGATGATCGAGCGCAACCACGG
CCATGTGGTCACTCTGGCTAGTATGGCCAGCTTTCTGAGTGCGGGTAACA
TGGCTAGCTACGCCTGCTCAAAAGCAAGTGCGCTAGCATTTCACGAAGCC
ATAGGCCAAGAATTGAAAGTTTGGTACAATGCCGATGGGGTTAAGACGAG
TGTTTTCCATCCACTGTATGTGGGGACCCCCATGATCAAGCCCCTGATGA
AGGGTGGAGCTCGCTTTAAACGCCCTGTACTGGCAGTGGAAACGGTGAGC
CACGCAATCAGCCAACAGATCCTGTCTGGGAAGAGTGGCCAAATAATTAT
ACCGGGCAAGCTTTGGTGGCTGAGTTTGCTGCGGGGATTTCCTACATGGC
TGCAGGAGTCGATAAGGCGCAGCAGCTCGCAGAGTGCGAAGAGACTCGGA
GATAGCGGCAGAGCGTGAATGTCCCTAACCACAGCTTTACAGCGGGTGCT
TAATGGAGCTTTCAGAAACCTTTCTGAAAGCACACGGGAGACTCTACTTC
TCTCCCTGCTCCCGAAATCCCTAGCCGCACTATTGGGTTACATTACACTG
CGCCAAGTAAATAGAGCCCTGAATGCATGGTCACTGAACAACTTAGCGAG
CCGGCCGTGGCAGAATGACCAAGAGCTCGTCTTAGTCACAGGGGGGTGCA
GCGGCATTGGGAAAGCAGTGATGGAGGAGCTTGCTCAGCATGGCGCTAAA
GTCATTATCCTTGATATCCAGCAGCCGTCCTTCGAGCTTCCCCCCGACGT
CTTTTTCTATAAGACTGACATCACTTCAACTGCTGCCCTACACGCAACAG
CCAATGAAATTCGTGCTGTACATGGACACCCAACAGTCCTTGTCAATAAT
GCTGGCGTATTGCATTTTACTCCTATCCTCGACCAAACAGAAGCCGCTGT
TCGCCAGACCTTTGAGGTTAATACCATGGCCCATTACTGGACGGTGAAGG
AGTTCCTCCCCGCGATGATCGAGCGCAACCACGGCCATGTGGTCACTCTG
GCTAGTATGGCCAGCTTTCTGAGTGCGGGTAACATGGCTAGCTACGCCTG
CTCAAAAGCAAGTGCGCTAGCATTTCACGAAGCCATAGGCCAAGAATTGA
AAGTTTGGTACAATGCCGATGGGGTTAAGACGAGTGTTTTCCATCCACTG
TATGTGGGGACCCCCATGATCAAGCCCCTGATGAAGGGTGGAGCTCGCTT
TAAACGCCCTGTACTGGCAGTGGAAACGGTGAGCCACGCAATCAGCCAAC
AGATCCTGTCTGGGAAGAGTGGCCAAATAATTATACCGGGCAAGCTTTGG
TGGCTGAGTTTGCTGCGGGGATTTCCTACATGGCTGCAGGAGTCGATAAG
GCGCAGCAGCTCGCAGAGTGCGAAGAGACTCGGAGATAGCGGCAGAGCGT
GA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006545ATCC10864_006545Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006545-T1.exon1ATCC10864_006545-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006545-T1.exon2ATCC10864_006545-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006545-T1.exon3ATCC10864_006545-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006545-T1.cdsATCC10864_006545-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006545-T1ATCC10864_006545-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08659
InterProIPR002347
PFAMPF00106
InterProIPR036291
InterProIPR020904
PFAMPF13561
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000166supercontigMCQH01000166:801302..802405 +
Powered by Drupal