You are here

Home

ATCC10864_006556-T1, ATCC10864_006556-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006556-T1
Unique NameATCC10864_006556-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:14021..16550+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006556-T1 ID=ATCC10864_006556-T1|Name=ATCC10864_006556-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2530bp|location=Sequence derived from alignment at MCQH01000169:14021..16550+ (Aspergillus niger ATCC 10864)
ATGACAGCTCTTAGCGAAGATTTGCTTGTAACTGTGAACAAGCTTCAAGA
TCTTGTCTTTAATACGATCGGAAATGACTCCCTTGACTTGCCGCAGATTG
TAAGTCCCTTCAATGTTCACCCGGCCCGGTGCCACCAATGCTACGGTGCT
AACCATCTGTGCAGGTTGTTGTGGGCTCTCAGTCGTCCGGCAAATCATCC
GTACTTGAGAACATTGTTGGTAGAGACTTCTTACCACGAGGTAGTGGTAT
AGTCACAAGGCGCCCATTGATCCTCCAACTCATAAATATTCCCAGCGAAC
GGCACGACAAGCCTGAAAGTGATGAGGTTCATATACCTCATACAGCAGCA
AGTGTGGCGGGACAGTATGAGTGGGCAGAATTTCATCATCTCCCTGGCCG
CAAATTCGATGATTTTGCCTTGGTCAAGCAGGAGATTGAAGCTGAGACCG
CAAGGATAGCTGGAAGCAACAAAGGAATTAACAGGCAGCCCATCAATCTC
AAGATTTTTTCCCCACACGTACTCAATCTTACCATGGTTGACTTGCCGGG
GTTGACGAAAGTGCCTATCGGGGACCAACCGTCCGATATTGAAAAGCAGA
CACGGGCTTTAATACTCGAATACATAGCGAAGCCGAACAGTATCATCTTA
GCCGTTTCGCCTGCTAATGTTGATCTTGTGAACTCTGAAGCTTTGAAACT
TGCTCGTCAAGTGGATGCCATGGGTCGAAGGACGATTGGGGTTTTGACGA
AACTGGACCTCATGGATCATGGCACGAACGCCATGGATATCCTTTCTGGC
CGGGTCTATCCTCTGAAGCTCGGTTTCATTGGAGTTGTTAATCGATCACA
GCAAGACATTCAGTCTGGGAAGTCATTGTCCGACGCATTGCATGCTGAAG
TCGATTTCTTCCGACACCACCCAGCCTATCGGAATATGGCGAACCGTTGC
GGTACTCAGTTTCTTGCGAAAACCCTGAATACCACCCTAATGTCTCATAT
CCGGGATCGGCTTCCTGACATAAAAGCGCGTCTTAACACTCTTATGGGTC
AAACTCAGCAAGAACTCGCAAGCTACGGCAACAAACAGTTCAGCGGGAAG
GAACATCGTGGGTCCCTTATTCTACAGCTTATGACGCGCTTCGCTTCATC
TTTCATATCTTCGATTGATGGAACGTCCTCCGAAATCTCAACCAAAGAAC
TTTGTGGAGGGGCAAGGATATATTATATCTTTAACTCGGTCTTCGGCAAC
TCTCTCGAAACAATTGATCCTACACATAACTTAACTGTTACTGATATTAG
AACTGCCATTCGGAACTCGACTGGTCCACGTCCGAGCCTGTTTGTTCCCG
AGCTCGCTTTTGACCTGCTTGTCAAGCCTCAGATAAAAATGCTAGAAGCT
CCTAGTCAGAGGTGTGTTGAACTGGTGTATGAGGAGCTCATAAAGATTTG
TCACACGTGCGGCTCGCAGGAATTGCTTCGCTTTCCACGGCTTCAAGCGA
AACTGATAGAGGTGGTGTCTGATCTTCTTCGTGAGCGTTTGGGACCGTGC
TCAGCATATGTTGAATCGCTCATTTCCATACAGAGGGCGTACATTAATAC
AAACCATCCTAACTTCCTCGGTGCAGCAGCAGCTATGTCGTCTGTCATGC
AGAACAGGCAAGAACAGGAACGACGGGCAGCGTTAGCCGATGACCGAAAA
AAGCGCGAGAAGAGACGGTTGAAAGAACTTGGAGCGGTGAATGGAAACCC
GCCAGCATCCCCTGAGGATGAGGACGAACAGCATACAGATTCCAAGACGC
AGAATATTCCTATCAGGAGTCAACCTACGAGAAATACCAGAAGCATGTCC
CCTCACTTTGGTAAGGGACAAGAAGGTGGCGTGACCGCAACCTTGAATGG
AGCTCATGCAAATTCTCATCAAACAGCTTTTGGAACAACCAATACCACTC
GTGACTCGTTCCTCAACTACTTCTTCGGTAAGGACGGCGCGCAACCTGCC
AGCTCATTACCTCAGCTGTCGAGTCAGAGCCGTCCATACACCAACGTCAA
TGAAGCAAGCATTAGTCACAACACTCGCCGGACTGATATGCGTGCCCCTA
TCATGTCAGCTGATGAGTACCCACCCCCTATGGAATATACTGGTGATGTC
GGAGCTGCCGTAAGACCATCATACCCTTGGTTACCCGAAAGATATGTGCT
GATCCGTTACTGTAGCCGAAGGAAGACCCCGAAGCTGTCCTCTCTGACCG
TGAGCTATTAGAGACGGAGCTGATTAGTCGACTAATATCATCTTACTTCA
ACATCGTCAGAGAAACCATCGCAGATCAAGTTCCTAAGGCTATCATGCAT
CTCCTTGTCAACCACAGCAAGGATGTCGTGCAAAATAGACTCGTGAGCGA
ACTTTATAAAGAAGATCTATTTGCGGAGCTCCTTTACGAGGATGACGGCA
TCAAAGCGGAGAGGGAGAAGTGCGAGAGATTGCTGGATACGTACAAGGAG
GCAGCAAAGATTGTCGGAGAAGTTCTGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000169:14021..16550+

>ATCC10864_006556-T1 ID=ATCC10864_006556-T1|Name=ATCC10864_006556-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7227bp|location=Sequence derived from alignment at MCQH01000169:14021..16550+ (Aspergillus niger ATCC 10864)
ATGACAGCTCTTAGCGAAGATTTGCTTGTAACTGTGAACAAGCTTCAAGA
TCTTGTCTTTAATACGATCGGAAATGACTCCCTTGACTTGCCGCAGATTG
TTGTTGTGGGCTCTCAGTCGTCCGGCAAATCATCCGTACTTGAGAACATT
GTTGGTAGAGACTTCTTACCACGAGGTAGTGGTATAGTCACAAGGCGCCC
ATTGATCCTCCAACTCATAAATATTCCCAGCGAACGGCACGACAAGCCTG
AAAGTGATGAGGTTCATATACCTCATACAGCAGCAAGTGTGGCGGGACAG
TATGAGTGGGCAGAATTTCATCATCTCCCTGGCCGCAAATTCGATGATTT
TGCCTTGGTCAAGCAGGAGATTGAAGCTGAGACCGCAAGGATAGCTGGAA
GCAACAAAGGAATTAACAGGCAGCCCATCAATCTCAAGATTTTTTCCCCA
CACGTACTCAATCTTACCATGGTTGACTTGCCGGGGTTGACGAAAGTGCC
TATCGGGGACCAACCGTCCGATATTGAAAAGCAGACACGGGCTTTAATAC
TCGAATACATAGCGAAGCCGAACAGTATCATCTTAGCCGTTTCGCCTGCT
AATGTTGATCTTGTGAACTCTGAAGCTTTGAAACTTGCTCGTCAAGTGGA
TGCCATGGGTCGAAGGACGATTGGGGTTTTGACGAAACTGGACCTCATGG
ATCATGGCACGAACGCCATGGATATCCTTTCTGGCCGGGTCTATCCTCTG
AAGCTCGGTTTCATTGGAGTTGTTAATCGATCACAGCAAGACATTCAGTC
TGGGAAGTCATTGTCCGACGCATTGCATGCTGAAGTCGATTTCTTCCGAC
ACCACCCAGCCTATCGGAATATGGCGAACCGTTGCGGTACTCAGTTTCTT
GCGAAAACCCTGAATACCACCCTAATGTCTCATATCCGGGATCGGCTTCC
TGACATAAAAGCGCGTCTTAACACTCTTATGGGTCAAACTCAGCAAGAAC
TCGCAAGCTACGGCAACAAACAGTTCAGCGGGAAGGAACATCGTGGGTCC
CTTATTCTACAGCTTATGACGCGCTTCGCTTCATCTTTCATATCTTCGAT
TGATGGAACGTCCTCCGAAATCTCAACCAAAGAACTTTGTGGAGGGGCAA
GGATATATTATATCTTTAACTCGGTCTTCGGCAACTCTCTCGAAACAATT
GATCCTACACATAACTTAACTGTTACTGATATTAGAACTGCCATTCGGAA
CTCGACTGGTCCACGTCCGAGCCTGTTTGTTCCCGAGCTCGCTTTTGACC
TGCTTGTCAAGCCTCAGATAAAAATGCTAGAAGCTCCTAGTCAGAGGTGT
GTTGAACTGGTGTATGAGGAGCTCATAAAGATTTGTCACACGTGCGGCTC
GCAGGAATTGCTTCGCTTTCCACGGCTTCAAGCGAAACTGATAGAGGTGG
TGTCTGATCTTCTTCGTGAGCGTTTGGGACCGTGCTCAGCATATGTTGAA
TCGCTCATTTCCATACAGAGGGCGTACATTAATACAAACCATCCTAACTT
CCTCGGTGCAGCAGCAGCTATGTCGTCTGTCATGCAGAACAGGCAAGAAC
AGGAACGACGGGCAGCGTTAGCCGATGACCGAAAAAAGCGCGAGAAGAGA
CGGTTGAAAGAACTTGGAGCGGTGAATGGAAACCCGCCAGCATCCCCTGA
GGATGAGGACGAACAGCATACAGATTCCAAGACGCAGAATATTCCTATCA
GGAGTCAACCTACGAGAAATACCAGAAGCATGTCCCCTCACTTTGGTAAG
GGACAAGAAGGTGGCGTGACCGCAACCTTGAATGGAGCTCATGCAAATTC
TCATCAAACAGCTTTTGGAACAACCAATACCACTCGTGACTCGTTCCTCA
ACTACTTCTTCGGTAAGGACGGCGCGCAACCTGCCAGCTCATTACCTCAG
CTGTCGAGTCAGAGCCGTCCATACACCAACGTCAATGAAGCAAGCATTAG
TCACAACACTCGCCGGACTGATATGCGTGCCCCTATCATGTCAGCTGATG
AGTACCCACCCCCTATGGAATATACTGGTGATGTCGGAGCTGCCCCGAAG
GAAGACCCCGAAGCTGTCCTCTCTGACCGTGAGCTATTAGAGACGGAGCT
GATTAGTCGACTAATATCATCTTACTTCAACATCGTCAGAGAAACCATCG
CAGATCAAGTTCCTAAGGCTATCATGCATCTCCTTGTCAACCACAGCAAG
GATGTCGTGCAAAATAGACTCGTGAGCGAACTTTATAAAGAAGATCTATT
TGCGGAGCTCCTTTACGAGGATGACGGCATCAAAGCGGAGAGGGAGAAGT
GCGAGAGATTGCTGGATACGTACAAGGAGGCAGCAAAGATTGTCGGAGAA
GTTCTGTAAATGACAGCTCTTAGCGAAGATTTGCTTGTAACTGTGAACAA
GCTTCAAGATCTTGTCTTTAATACGATCGGAAATGACTCCCTTGACTTGC
CGCAGATTGTTGTTGTGGGCTCTCAGTCGTCCGGCAAATCATCCGTACTT
GAGAACATTGTTGGTAGAGACTTCTTACCACGAGGTAGTGGTATAGTCAC
AAGGCGCCCATTGATCCTCCAACTCATAAATATTCCCAGCGAACGGCACG
ACAAGCCTGAAAGTGATGAGGTTCATATACCTCATACAGCAGCAAGTGTG
GCGGGACAGTATGAGTGGGCAGAATTTCATCATCTCCCTGGCCGCAAATT
CGATGATTTTGCCTTGGTCAAGCAGGAGATTGAAGCTGAGACCGCAAGGA
TAGCTGGAAGCAACAAAGGAATTAACAGGCAGCCCATCAATCTCAAGATT
TTTTCCCCACACGTACTCAATCTTACCATGGTTGACTTGCCGGGGTTGAC
GAAAGTGCCTATCGGGGACCAACCGTCCGATATTGAAAAGCAGACACGGG
CTTTAATACTCGAATACATAGCGAAGCCGAACAGTATCATCTTAGCCGTT
TCGCCTGCTAATGTTGATCTTGTGAACTCTGAAGCTTTGAAACTTGCTCG
TCAAGTGGATGCCATGGGTCGAAGGACGATTGGGGTTTTGACGAAACTGG
ACCTCATGGATCATGGCACGAACGCCATGGATATCCTTTCTGGCCGGGTC
TATCCTCTGAAGCTCGGTTTCATTGGAGTTGTTAATCGATCACAGCAAGA
CATTCAGTCTGGGAAGTCATTGTCCGACGCATTGCATGCTGAAGTCGATT
TCTTCCGACACCACCCAGCCTATCGGAATATGGCGAACCGTTGCGGTACT
CAGTTTCTTGCGAAAACCCTGAATACCACCCTAATGTCTCATATCCGGGA
TCGGCTTCCTGACATAAAAGCGCGTCTTAACACTCTTATGGGTCAAACTC
AGCAAGAACTCGCAAGCTACGGCAACAAACAGTTCAGCGGGAAGGAACAT
CGTGGGTCCCTTATTCTACAGCTTATGACGCGCTTCGCTTCATCTTTCAT
ATCTTCGATTGATGGAACGTCCTCCGAAATCTCAACCAAAGAACTTTGTG
GAGGGGCAAGGATATATTATATCTTTAACTCGGTCTTCGGCAACTCTCTC
GAAACAATTGATCCTACACATAACTTAACTGTTACTGATATTAGAACTGC
CATTCGGAACTCGACTGGTCCACGTCCGAGCCTGTTTGTTCCCGAGCTCG
CTTTTGACCTGCTTGTCAAGCCTCAGATAAAAATGCTAGAAGCTCCTAGT
CAGAGGTGTGTTGAACTGGTGTATGAGGAGCTCATAAAGATTTGTCACAC
GTGCGGCTCGCAGGAATTGCTTCGCTTTCCACGGCTTCAAGCGAAACTGA
TAGAGGTGGTGTCTGATCTTCTTCGTGAGCGTTTGGGACCGTGCTCAGCA
TATGTTGAATCGCTCATTTCCATACAGAGGGCGTACATTAATACAAACCA
TCCTAACTTCCTCGGTGCAGCAGCAGCTATGTCGTCTGTCATGCAGAACA
GGCAAGAACAGGAACGACGGGCAGCGTTAGCCGATGACCGAAAAAAGCGC
GAGAAGAGACGGTTGAAAGAACTTGGAGCGGTGAATGGAAACCCGCCAGC
ATCCCCTGAGGATGAGGACGAACAGCATACAGATTCCAAGACGCAGAATA
TTCCTATCAGGAGTCAACCTACGAGAAATACCAGAAGCATGTCCCCTCAC
TTTGGTAAGGGACAAGAAGGTGGCGTGACCGCAACCTTGAATGGAGCTCA
TGCAAATTCTCATCAAACAGCTTTTGGAACAACCAATACCACTCGTGACT
CGTTCCTCAACTACTTCTTCGGTAAGGACGGCGCGCAACCTGCCAGCTCA
TTACCTCAGCTGTCGAGTCAGAGCCGTCCATACACCAACGTCAATGAAGC
AAGCATTAGTCACAACACTCGCCGGACTGATATGCGTGCCCCTATCATGT
CAGCTGATGAGTACCCACCCCCTATGGAATATACTGGTGATGTCGGAGCT
GCCCCGAAGGAAGACCCCGAAGCTGTCCTCTCTGACCGTGAGCTATTAGA
GACGGAGCTGATTAGTCGACTAATATCATCTTACTTCAACATCGTCAGAG
AAACCATCGCAGATCAAGTTCCTAAGGCTATCATGCATCTCCTTGTCAAC
CACAGCAAGGATGTCGTGCAAAATAGACTCGTGAGCGAACTTTATAAAGA
AGATCTATTTGCGGAGCTCCTTTACGAGGATGACGGCATCAAAGCGGAGA
GGGAGAAGTGCGAGAGATTGCTGGATACGTACAAGGAGGCAGCAAAGATT
GTCGGAGAAGTTCTGTAAATGACAGCTCTTAGCGAAGATTTGCTTGTAAC
TGTGAACAAGCTTCAAGATCTTGTCTTTAATACGATCGGAAATGACTCCC
TTGACTTGCCGCAGATTGTTGTTGTGGGCTCTCAGTCGTCCGGCAAATCA
TCCGTACTTGAGAACATTGTTGGTAGAGACTTCTTACCACGAGGTAGTGG
TATAGTCACAAGGCGCCCATTGATCCTCCAACTCATAAATATTCCCAGCG
AACGGCACGACAAGCCTGAAAGTGATGAGGTTCATATACCTCATACAGCA
GCAAGTGTGGCGGGACAGTATGAGTGGGCAGAATTTCATCATCTCCCTGG
CCGCAAATTCGATGATTTTGCCTTGGTCAAGCAGGAGATTGAAGCTGAGA
CCGCAAGGATAGCTGGAAGCAACAAAGGAATTAACAGGCAGCCCATCAAT
CTCAAGATTTTTTCCCCACACGTACTCAATCTTACCATGGTTGACTTGCC
GGGGTTGACGAAAGTGCCTATCGGGGACCAACCGTCCGATATTGAAAAGC
AGACACGGGCTTTAATACTCGAATACATAGCGAAGCCGAACAGTATCATC
TTAGCCGTTTCGCCTGCTAATGTTGATCTTGTGAACTCTGAAGCTTTGAA
ACTTGCTCGTCAAGTGGATGCCATGGGTCGAAGGACGATTGGGGTTTTGA
CGAAACTGGACCTCATGGATCATGGCACGAACGCCATGGATATCCTTTCT
GGCCGGGTCTATCCTCTGAAGCTCGGTTTCATTGGAGTTGTTAATCGATC
ACAGCAAGACATTCAGTCTGGGAAGTCATTGTCCGACGCATTGCATGCTG
AAGTCGATTTCTTCCGACACCACCCAGCCTATCGGAATATGGCGAACCGT
TGCGGTACTCAGTTTCTTGCGAAAACCCTGAATACCACCCTAATGTCTCA
TATCCGGGATCGGCTTCCTGACATAAAAGCGCGTCTTAACACTCTTATGG
GTCAAACTCAGCAAGAACTCGCAAGCTACGGCAACAAACAGTTCAGCGGG
AAGGAACATCGTGGGTCCCTTATTCTACAGCTTATGACGCGCTTCGCTTC
ATCTTTCATATCTTCGATTGATGGAACGTCCTCCGAAATCTCAACCAAAG
AACTTTGTGGAGGGGCAAGGATATATTATATCTTTAACTCGGTCTTCGGC
AACTCTCTCGAAACAATTGATCCTACACATAACTTAACTGTTACTGATAT
TAGAACTGCCATTCGGAACTCGACTGGTCCACGTCCGAGCCTGTTTGTTC
CCGAGCTCGCTTTTGACCTGCTTGTCAAGCCTCAGATAAAAATGCTAGAA
GCTCCTAGTCAGAGGTGTGTTGAACTGGTGTATGAGGAGCTCATAAAGAT
TTGTCACACGTGCGGCTCGCAGGAATTGCTTCGCTTTCCACGGCTTCAAG
CGAAACTGATAGAGGTGGTGTCTGATCTTCTTCGTGAGCGTTTGGGACCG
TGCTCAGCATATGTTGAATCGCTCATTTCCATACAGAGGGCGTACATTAA
TACAAACCATCCTAACTTCCTCGGTGCAGCAGCAGCTATGTCGTCTGTCA
TGCAGAACAGGCAAGAACAGGAACGACGGGCAGCGTTAGCCGATGACCGA
AAAAAGCGCGAGAAGAGACGGTTGAAAGAACTTGGAGCGGTGAATGGAAA
CCCGCCAGCATCCCCTGAGGATGAGGACGAACAGCATACAGATTCCAAGA
CGCAGAATATTCCTATCAGGAGTCAACCTACGAGAAATACCAGAAGCATG
TCCCCTCACTTTGGTAAGGGACAAGAAGGTGGCGTGACCGCAACCTTGAA
TGGAGCTCATGCAAATTCTCATCAAACAGCTTTTGGAACAACCAATACCA
CTCGTGACTCGTTCCTCAACTACTTCTTCGGTAAGGACGGCGCGCAACCT
GCCAGCTCATTACCTCAGCTGTCGAGTCAGAGCCGTCCATACACCAACGT
CAATGAAGCAAGCATTAGTCACAACACTCGCCGGACTGATATGCGTGCCC
CTATCATGTCAGCTGATGAGTACCCACCCCCTATGGAATATACTGGTGAT
GTCGGAGCTGCCCCGAAGGAAGACCCCGAAGCTGTCCTCTCTGACCGTGA
GCTATTAGAGACGGAGCTGATTAGTCGACTAATATCATCTTACTTCAACA
TCGTCAGAGAAACCATCGCAGATCAAGTTCCTAAGGCTATCATGCATCTC
CTTGTCAACCACAGCAAGGATGTCGTGCAAAATAGACTCGTGAGCGAACT
TTATAAAGAAGATCTATTTGCGGAGCTCCTTTACGAGGATGACGGCATCA
AAGCGGAGAGGGAGAAGTGCGAGAGATTGCTGGATACGTACAAGGAGGCA
GCAAAGATTGTCGGAGAAGTTCTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006556ATCC10864_006556Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006556-T1.exon1ATCC10864_006556-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006556-T1.exon2ATCC10864_006556-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006556-T1.exon3ATCC10864_006556-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006556-T1.cdsATCC10864_006556-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006556-T1ATCC10864_006556-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00350
PFAMPF02212
InterProIPR003130
InterProIPR001401
InterProIPR030381
InterProIPR019762
InterProIPR020850
InterProIPR000375
PFAMPF01031
InterProIPR027417
InterProIPR022812
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:14021..16550 +
Powered by Drupal