You are here

Home

ATCC10864_006558-T1, ATCC10864_006558-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006558-T1
Unique NameATCC10864_006558-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:19773..21590-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006558-T1 ID=ATCC10864_006558-T1|Name=ATCC10864_006558-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1818bp|location=Sequence derived from alignment at MCQH01000169:19773..21590- (Aspergillus niger ATCC 10864)
ATGCCTCGCTACATTGACTCTTTGCTAACGGAAGACAAGCTACTTGTCCT
TCGAGGTCCTGCAGGAAGCGGTAAGACGGCTACAATTTCATTACTATCAG
CTGTGTTGAATTTCGACATTCTCGAATGGAAAAACCCTTCTTCGTCAGAG
TCCGCCACCAAAGCACATGTATCAATTGCTTCCCGTTTTGATGAGTTCCT
GGAGCGTGGGAACGAATTCAAATGTCTTGACCTAGAAGAGGTGGCTAGCT
CTCCCGGGCTTGAAGATAATAGCAAGAATGCATATGCTTCGCGACATCGC
ATAATTCTCATAGAAGAGTTTCCAACGCTTACAGGTTCTGCGTCTGGCCT
GATTCCCTTCAGACTAGCTCTTCTGCGGTATCTTGACAGAATACCACAAC
AAAACATTAATCCCGAAACTGATGTGCAGCGAACCTCCCCAATTGTCTTG
GTCGTGTCAGAAACGCTTCTTAACTCACGATCTTTCCCGTCAGATAGCCT
AACAGCTCATCGGTTGCTAGGGCCAGTACTCTACAACCACCCGAAAACGA
GCATCCTTGATTTTAATAGCATAGCCCCGACATATATGTACAAGGCTCTG
CATCTCGTTCTAGAAAAGGAGGCTCGACTTTCCAAACGTGAGAGGTTTCC
AGGCCCTGCCATACTTCATAATATCTCTACTATTGGGGACATTCGGAGTG
CAATCTCGTCCTTAGAATTTGTTTGCATGAATTCCGGAGGGTTCAAGAAA
TTTCCACCCCCAAAAACCAAGAATTCGAAAGGATCTAGCATACCTCTTAC
GCCCCTTGAAAGGGAGACATTGGATTTAATTACACAGAGAGAAGCAAGTC
TTGGGCTATTTCACGCCGTTGGCAAGATTATGTATAACAAACGTGTCGAT
GCAGGTTCAACTGAAGACGCCCAAGTTGTGTTGCCCCCAGACTACTTAAG
CCACCATAAGCGGCCACAATCATCCCAAGTATGTGTCAACGAACTTGTGG
ATGAAGCCGGAACCGATAACCAAACCTTCATTAGCGCTCTTCACGAGAAC
TATGTTCCATCATGCAACGGTCCATCATTTACAGACTATCTGGATGGTTG
CATAGGTGCGTTATCCGACAGCGATATGCTGTCTTTCGACACAAGGGGAC
GAAGCAAGTTCGGGCTGGCTGGTGTTAGTAGATACAACTCCGGATCGGAC
TCATTGCGTCAAGAAGACCTCAGTTATCAAGTTGCTACTCGAGGTATATT
GTTTGCTCTTCCAAGCCCTGTGAAGAGATCTGCATGGTCCAATAACGGCT
CGAACCATACAAGAAGTGCATATAAAATGCTTTTTCCGGCTTCATTGCGA
TTGCTTCGAGATATGGAAGAGATACAAGATCTCATAGACATATGGTCAGC
TAAACTATTGGACCCATCAATATCGGGCTTCAAACCTGAGGGGGCCGCTA
GCTTAAGTGACAGCCGCAGTAAACCAACTGTAGCTGTTACCATGATGTCA
CGCAGTGATCTCATTCTTCACCAACTGCCGTATCTGGCTTTAATAGCAGG
AGACTTTGAGCAATTCCAAGGACTCCATAGGCTTACCAAGCTCAGCGGGA
CTAAGAATCAGAGTGATGCTAATGACTTTGAAATGCTTGACTACCAAGTT
GAGTTACCATCAATCGCATCTACCGCACAGTGGAAGAGCCTTCCTACAGG
AAGCTCATCGCGAACCAGTCGTCGATATCACAGCAATACTTTTGGACCCC
AGCTGCCGCCGTCCCTGGAGAAGGAGAGACTTTTTCTGGCTGATGATGAT
ATTGTAGACGACTACTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000169:19773..21590-

>ATCC10864_006558-T1 ID=ATCC10864_006558-T1|Name=ATCC10864_006558-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1818bp|location=Sequence derived from alignment at MCQH01000169:19773..21590- (Aspergillus niger ATCC 10864)
ATGCCTCGCTACATTGACTCTTTGCTAACGGAAGACAAGCTACTTGTCCT
TCGAGGTCCTGCAGGAAGCGGTAAGACGGCTACAATTTCATTACTATCAG
CTGTGTTGAATTTCGACATTCTCGAATGGAAAAACCCTTCTTCGTCAGAG
TCCGCCACCAAAGCACATGTATCAATTGCTTCCCGTTTTGATGAGTTCCT
GGAGCGTGGGAACGAATTCAAATGTCTTGACCTAGAAGAGGTGGCTAGCT
CTCCCGGGCTTGAAGATAATAGCAAGAATGCATATGCTTCGCGACATCGC
ATAATTCTCATAGAAGAGTTTCCAACGCTTACAGGTTCTGCGTCTGGCCT
GATTCCCTTCAGACTAGCTCTTCTGCGGTATCTTGACAGAATACCACAAC
AAAACATTAATCCCGAAACTGATGTGCAGCGAACCTCCCCAATTGTCTTG
GTCGTGTCAGAAACGCTTCTTAACTCACGATCTTTCCCGTCAGATAGCCT
AACAGCTCATCGGTTGCTAGGGCCAGTACTCTACAACCACCCGAAAACGA
GCATCCTTGATTTTAATAGCATAGCCCCGACATATATGTACAAGGCTCTG
CATCTCGTTCTAGAAAAGGAGGCTCGACTTTCCAAACGTGAGAGGTTTCC
AGGCCCTGCCATACTTCATAATATCTCTACTATTGGGGACATTCGGAGTG
CAATCTCGTCCTTAGAATTTGTTTGCATGAATTCCGGAGGGTTCAAGAAA
TTTCCACCCCCAAAAACCAAGAATTCGAAAGGATCTAGCATACCTCTTAC
GCCCCTTGAAAGGGAGACATTGGATTTAATTACACAGAGAGAAGCAAGTC
TTGGGCTATTTCACGCCGTTGGCAAGATTATGTATAACAAACGTGTCGAT
GCAGGTTCAACTGAAGACGCCCAAGTTGTGTTGCCCCCAGACTACTTAAG
CCACCATAAGCGGCCACAATCATCCCAAGTATGTGTCAACGAACTTGTGG
ATGAAGCCGGAACCGATAACCAAACCTTCATTAGCGCTCTTCACGAGAAC
TATGTTCCATCATGCAACGGTCCATCATTTACAGACTATCTGGATGGTTG
CATAGGTGCGTTATCCGACAGCGATATGCTGTCTTTCGACACAAGGGGAC
GAAGCAAGTTCGGGCTGGCTGGTGTTAGTAGATACAACTCCGGATCGGAC
TCATTGCGTCAAGAAGACCTCAGTTATCAAGTTGCTACTCGAGGTATATT
GTTTGCTCTTCCAAGCCCTGTGAAGAGATCTGCATGGTCCAATAACGGCT
CGAACCATACAAGAAGTGCATATAAAATGCTTTTTCCGGCTTCATTGCGA
TTGCTTCGAGATATGGAAGAGATACAAGATCTCATAGACATATGGTCAGC
TAAACTATTGGACCCATCAATATCGGGCTTCAAACCTGAGGGGGCCGCTA
GCTTAAGTGACAGCCGCAGTAAACCAACTGTAGCTGTTACCATGATGTCA
CGCAGTGATCTCATTCTTCACCAACTGCCGTATCTGGCTTTAATAGCAGG
AGACTTTGAGCAATTCCAAGGACTCCATAGGCTTACCAAGCTCAGCGGGA
CTAAGAATCAGAGTGATGCTAATGACTTTGAAATGCTTGACTACCAAGTT
GAGTTACCATCAATCGCATCTACCGCACAGTGGAAGAGCCTTCCTACAGG
AAGCTCATCGCGAACCAGTCGTCGATATCACAGCAATACTTTTGGACCCC
AGCTGCCGCCGTCCCTGGAGAAGGAGAGACTTTTTCTGGCTGATGATGAT
ATTGTAGACGACTACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006558ATCC10864_006558Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006558-T1.cdsATCC10864_006558-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006558-T1.exon1ATCC10864_006558-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006558-T1ATCC10864_006558-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03215
InterProIPR004582
InterProIPR027417
Properties
Property NameValue
NoteBUSCO:EOG09263HK2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:19773..21590 -
Powered by Drupal