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ATCC10864_006565-T1, ATCC10864_006565-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006565-T1
Unique NameATCC10864_006565-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:42737..43655-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006565-T1 ID=ATCC10864_006565-T1|Name=ATCC10864_006565-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=919bp|location=Sequence derived from alignment at MCQH01000169:42737..43655- (Aspergillus niger ATCC 10864)
ATGGTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTCTC
CACCAAGGCCATCGCCGCCAAGGACACCGCATACTGTAAGTCAGCCAGTC
CACTGGAGAAAAAGCCGCCGTATCTTCAGAATTAACCAATGCGACATCAA
TAACACCAACAGGCCCCTACTCAAAGTTCCGTGTTGGCGCATGCATTTTG
ACCGAGTCGGGCGAATTCGTCCAGGGCGCCAATGTTGAAAATGCCTCTTA
TCCTGTTGGAACTTGTGCGGAGCGAGTAGCTTTTGGAAGTGCGATTGTAA
GCTATCAACTCTACACCTCTTTTTCTTTTAATCTCTGGGTCTAGTACTTG
CTGTACCTTGCACATGTCAGAAATCAACTGAAGAAAATCACTCATGCATT
TGCTTACTCGTCGGACTGCTTTGCAGGTGGCCGGGCATCGCAACTTCAAG
GCCATTGCCGTTGCGACTGACATCAAACCTCCCGCTTCACCATGCGGCAT
GTGTAGACAGTTGTACGTATCGTTCTCTACCCCCTGGCCCTGGTTTTTCG
ATTTTTAAGCTGTACCCGCGAATAGCTTGCAAAAAAGAAGACAAGCGACC
ACTCAATCCATCCATTAATGATTGATTGGCTACCCGGAGATTTCTATAAT
TCCCTCATCCCAATAATGCGACAACAAACCACGCACGTACCTGGCTAACA
ACAATGATTTGTGTATCTCAGTATGAGTGAATTTACCACCCCAGAGTTCC
CTATCTTTATGTATGATGGTGAGGGGAACTATACTCTTACTACAATGGGA
GAGGTAATATATTGAGCCAATCCTTCCAACCATTCTGTTCTGAATCAGTG
GCTGACTGATGACTTGTTCGCATCCAGCTCCTACCGAGCTCGTTCGGCCC
GAGTGATTTCACTCATTGA
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Coding sequence (CDS) from alignment at MCQH01000169:42737..43655-

>ATCC10864_006565-T1 ID=ATCC10864_006565-T1|Name=ATCC10864_006565-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2145bp|location=Sequence derived from alignment at MCQH01000169:42737..43655- (Aspergillus niger ATCC 10864)
CTCCTACCGAGCTCGTTCGGCCCGAGTGATTTCACTCATTGATATGAGTG
AATTTACCACCCCAGAGTTCCCTATCTTTATGTATGATGGTGAGGGGAAC
TATACTCTTACTACAATGGGAGAGGTGGCCGGGCATCGCAACTTCAAGGC
CATTGCCGTTGCGACTGACATCAAACCTCCCGCTTCACCATGCGGCATGT
GTAGACAGTTGCCCCTACTCAAAGTTCCGTGTTGGCGCATGCATTTTGAC
CGAGTCGGGCGAATTCGTCCAGGGCGCCAATGTTGAAAATGCCTCTTATC
CTGTTGGAACTTGTGCGGAGCGAGTAGCTTTTGGAAGTGCGATTATGGTA
CACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTCTCCACCAA
GGCCATCGCCGCCAAGGACACCGCATACTCTCCTACCGAGCTCGTTCGGC
CCGAGTGATTTCACTCATTGATATGAGTGAATTTACCACCCCAGAGTTCC
CTATCTTTATGTATGATGGTGAGGGGAACTATACTCTTACTACAATGGGA
GAGGTGGCCGGGCATCGCAACTTCAAGGCCATTGCCGTTGCGACTGACAT
CAAACCTCCCGCTTCACCATGCGGCATGTGTAGACAGTTGCCCCTACTCA
AAGTTCCGTGTTGGCGCATGCATTTTGACCGAGTCGGGCGAATTCGTCCA
GGGCGCCAATGTTGAAAATGCCTCTTATCCTGTTGGAACTTGTGCGGAGC
GAGTAGCTTTTGGAAGTGCGATTATGGTACACGCCGCCGACCACCTGTCT
GCCCAAGAGCTCGAGACGCTCTCCACCAAGGCCATCGCCGCCAAGGACAC
CGCATACTCTCCTACCGAGCTCGTTCGGCCCGAGTGATTTCACTCATTGA
TATGAGTGAATTTACCACCCCAGAGTTCCCTATCTTTATGTATGATGGTG
AGGGGAACTATACTCTTACTACAATGGGAGAGGTGGCCGGGCATCGCAAC
TTCAAGGCCATTGCCGTTGCGACTGACATCAAACCTCCCGCTTCACCATG
CGGCATGTGTAGACAGTTGCCCCTACTCAAAGTTCCGTGTTGGCGCATGC
ATTTTGACCGAGTCGGGCGAATTCGTCCAGGGCGCCAATGTTGAAAATGC
CTCTTATCCTGTTGGAACTTGTGCGGAGCGAGTAGCTTTTGGAAGTGCGA
TTATGGTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTC
TCCACCAAGGCCATCGCCGCCAAGGACACCGCATACTCTCCTACCGAGCT
CGTTCGGCCCGAGTGATTTCACTCATTGATATGAGTGAATTTACCACCCC
AGAGTTCCCTATCTTTATGTATGATGGTGAGGGGAACTATACTCTTACTA
CAATGGGAGAGGTGGCCGGGCATCGCAACTTCAAGGCCATTGCCGTTGCG
ACTGACATCAAACCTCCCGCTTCACCATGCGGCATGTGTAGACAGTTGCC
CCTACTCAAAGTTCCGTGTTGGCGCATGCATTTTGACCGAGTCGGGCGAA
TTCGTCCAGGGCGCCAATGTTGAAAATGCCTCTTATCCTGTTGGAACTTG
TGCGGAGCGAGTAGCTTTTGGAAGTGCGATTATGGTACACGCCGCCGACC
ACCTGTCTGCCCAAGAGCTCGAGACGCTCTCCACCAAGGCCATCGCCGCC
AAGGACACCGCATACTCTCCTACCGAGCTCGTTCGGCCCGAGTGATTTCA
CTCATTGATATGAGTGAATTTACCACCCCAGAGTTCCCTATCTTTATGTA
TGATGGTGAGGGGAACTATACTCTTACTACAATGGGAGAGGTGGCCGGGC
ATCGCAACTTCAAGGCCATTGCCGTTGCGACTGACATCAAACCTCCCGCT
TCACCATGCGGCATGTGTAGACAGTTGCCCCTACTCAAAGTTCCGTGTTG
GCGCATGCATTTTGACCGAGTCGGGCGAATTCGTCCAGGGCGCCAATGTT
GAAAATGCCTCTTATCCTGTTGGAACTTGTGCGGAGCGAGTAGCTTTTGG
AAGTGCGATTATGGTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCG
AGACGCTCTCCACCAAGGCCATCGCCGCCAAGGACACCGCATACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009972cytidine deamination
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003824catalytic activity
GO:0004126cytidine deaminase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006565ATCC10864_006565Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006565-T1ATCC10864_006565-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006565-T1.cdsATCC10864_006565-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006565-T1.exon5ATCC10864_006565-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_006565-T1.exon4ATCC10864_006565-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006565-T1.exon3ATCC10864_006565-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006565-T1.exon2ATCC10864_006565-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006565-T1.exon1ATCC10864_006565-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002125
PFAMPF08211
PFAMPF00383
InterProIPR006262
InterProIPR016193
Properties
Property NameValue
NoteBUSCO:EOG09264RJL
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:42737..43655 -
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