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ATCC10864_006569-T1, ATCC10864_006569-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006569-T1
Unique NameATCC10864_006569-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:48907..49832-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006569-T1 ID=ATCC10864_006569-T1|Name=ATCC10864_006569-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=926bp|location=Sequence derived from alignment at MCQH01000169:48907..49832- (Aspergillus niger ATCC 10864)
ATGGCCGAAGTCGCCCAACCGGTTCCTGCTGAGTCGCAGGCCAAGCATGT
TGTTTACTGTGGAGGTACGTCGTCTCTTCTCGTCTCTGATATCGCTTTTG
AAAGCGATGTTTTCTGAGGGAATTAAAATTTAACTGATCGTCTGATGTGA
ACAGTTTGCACATTGCCTCCGGAGGTACGCTTACATATATACATACGCCC
TATGCACTCGATCTTAAGGCCCATCTTCATCTGCGAGGACGAAGCCACTC
TGCTCCTTCCAGCAATATATTATTTAGACCCTCCAAAGAGGGCATATGGC
AGCCAGCTAACCTCGAATCCGGAATCGTCTAGTACTGTGAATTCGGTGGC
ACGGCCAAGAAATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATGTA
CCAGTCGTTATATTCTGAGGGTTCGTTGTTATTTCCCTCTTCTTCTCGGA
TTTCCCGGGTGTTCAGCTCAGCTCGCTAACTTACGGTCTATTTGTCTTAT
GTAGAGGCCCTCAACTCTAATCTTGCTACATTGTCGGTATCGGCTCGGGA
GCGCGCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTG
AGGCGCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGG
GTTGAGCGGAACAAGCGGAAACATGTTACTGTTATCACGGGGTTGGATAT
ATATGGGTTGGAGAATAAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCG
CTACTGGTTCTTCAATGACTAGGTCTGCGGGTGGAACTGAGGAAATTACC
GTGCAGGGTGATGTAAGTGATGATGTTAAGGAATGGCTGCTCGAGGTGTA
CGGGAAGGAGATCCCGGAGGCCAATATTGAGCTCATTGAGGATAAGAAGA
AGAAGAAGGCGACTGAAGCGCCCTGA
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Coding sequence (CDS) from alignment at MCQH01000169:48907..49832-

>ATCC10864_006569-T1 ID=ATCC10864_006569-T1|Name=ATCC10864_006569-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2376bp|location=Sequence derived from alignment at MCQH01000169:48907..49832- (Aspergillus niger ATCC 10864)
AGGCCCTCAACTCTAATCTTGCTACATTGTCGGTATCGGCTCGGGAGCGC
GCAGCTAAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTGAGGC
GCGCGATGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGGGTTG
AGCGGAACAAGCGGAAACATGTTACTGTTATCACGGGGTTGGATATATAT
GGGTTGGAGAATAAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCGCTAC
TGGTTCTTCAATGACTAGGTCTGCGGGTGGAACTGAGGAAATTACCGTGC
AGGGTGATGTAAGTGATGATGTTAAGGAATGGCTGCTCGAGGTGTACGGG
AAGGAGATCCCGGAGGCCAATATTGAGCTCATTGAGGATAAGAAGAAGAA
GAAGGCGACTGAAGCGCCCTGATACTGTGAATTCGGTGGCACGGCCAAGA
AATGCGAGGAATGGTTGAAGGACGCTCATCCGGACATGTACCAGTCGTTA
TATTCTGAGGTTTGCACATTGCCTCCGGAGATGGCCGAAGTCGCCCAACC
GGTTCCTGCTGAGTCGCAGGCCAAGCATGTTGTTTACTGTGGAGAGGCCC
TCAACTCTAATCTTGCTACATTGTCGGTATCGGCTCGGGAGCGCGCAGCT
AAGGATGCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTGAGGCGCGCGA
TGCTGAGCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGGGTTGAGCGGA
ACAAGCGGAAACATGTTACTGTTATCACGGGGTTGGATATATATGGGTTG
GAGAATAAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCGCTACTGGTTC
TTCAATGACTAGGTCTGCGGGTGGAACTGAGGAAATTACCGTGCAGGGTG
ATGTAAGTGATGATGTTAAGGAATGGCTGCTCGAGGTGTACGGGAAGGAG
ATCCCGGAGGCCAATATTGAGCTCATTGAGGATAAGAAGAAGAAGAAGGC
GACTGAAGCGCCCTGATACTGTGAATTCGGTGGCACGGCCAAGAAATGCG
AGGAATGGTTGAAGGACGCTCATCCGGACATGTACCAGTCGTTATATTCT
GAGGTTTGCACATTGCCTCCGGAGATGGCCGAAGTCGCCCAACCGGTTCC
TGCTGAGTCGCAGGCCAAGCATGTTGTTTACTGTGGAGAGGCCCTCAACT
CTAATCTTGCTACATTGTCGGTATCGGCTCGGGAGCGCGCAGCTAAGGAT
GCGGCGAAGAAGGAGGCTAAGGCTGCTGCGGCTGAGGCGCGCGATGCTGA
GCGGAAGGCGGCGTCTAAGGTACAGATTAAGCGGGTTGAGCGGAACAAGC
GGAAACATGTTACTGTTATCACGGGGTTGGATATATATGGGTTGGAGAAT
AAGAAGATCGCTAAGGATCTGGGCAAGAAGTTCGCTACTGGTTCTTCAAT
GACTAGGTCTGCGGGTGGAACTGAGGAAATTACCGTGCAGGGTGATGTAA
GTGATGATGTTAAGGAATGGCTGCTCGAGGTGTACGGGAAGGAGATCCCG
GAGGCCAATATTGAGCTCATTGAGGATAAGAAGAAGAAGAAGGCGACTGA
AGCGCCCTGATACTGTGAATTCGGTGGCACGGCCAAGAAATGCGAGGAAT
GGTTGAAGGACGCTCATCCGGACATGTACCAGTCGTTATATTCTGAGGTT
TGCACATTGCCTCCGGAGATGGCCGAAGTCGCCCAACCGGTTCCTGCTGA
GTCGCAGGCCAAGCATGTTGTTTACTGTGGAGAGGCCCTCAACTCTAATC
TTGCTACATTGTCGGTATCGGCTCGGGAGCGCGCAGCTAAGGATGCGGCG
AAGAAGGAGGCTAAGGCTGCTGCGGCTGAGGCGCGCGATGCTGAGCGGAA
GGCGGCGTCTAAGGTACAGATTAAGCGGGTTGAGCGGAACAAGCGGAAAC
ATGTTACTGTTATCACGGGGTTGGATATATATGGGTTGGAGAATAAGAAG
ATCGCTAAGGATCTGGGCAAGAAGTTCGCTACTGGTTCTTCAATGACTAG
GTCTGCGGGTGGAACTGAGGAAATTACCGTGCAGGGTGATGTAAGTGATG
ATGTTAAGGAATGGCTGCTCGAGGTGTACGGGAAGGAGATCCCGGAGGCC
AATATTGAGCTCATTGAGGATAAGAAGAAGAAGAAGGCGACTGAAGCGCC
CTGATACTGTGAATTCGGTGGCACGGCCAAGAAATGCGAGGAATGGTTGA
AGGACGCTCATCCGGACATGTACCAGTCGTTATATTCTGAGGTTTGCACA
TTGCCTCCGGAGATGGCCGAAGTCGCCCAACCGGTTCCTGCTGAGTCGCA
GGCCAAGCATGTTGTTTACTGTGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TMA22ATCC10864_006569Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006569-T1ATCC10864_006569-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006569-T1.cdsATCC10864_006569-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006569-T1.exon4ATCC10864_006569-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006569-T1.exon3ATCC10864_006569-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006569-T1.exon2ATCC10864_006569-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006569-T1.exon1ATCC10864_006569-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036877
PFAMPF01253
InterProIPR001950
Properties
Property NameValue
NoteBUSCO:EOG092652NQ
ProductTranslation machinery-associated protein 22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:48907..49832 -
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