You are here

Home

ATCC10864_006638-T1, ATCC10864_006638-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006638-T1
Unique NameATCC10864_006638-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:251734..253017+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006638-T1 ID=ATCC10864_006638-T1|Name=ATCC10864_006638-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1284bp|location=Sequence derived from alignment at MCQH01000169:251734..253017+ (Aspergillus niger ATCC 10864)
ATGCCTCCGCGACGAGCCCATACGAAGTCCCGGAACGGATGCGACCAGTG
CAAAACTCGGCGAGTCAAAGTGCGTTGCCCGCTCTCCAGCCTGGAATTTC
CGCTGATCCCCACAGTGCGATGAAGCCCAGCCATGTGCCAACTGCGTGAA
ACGACACCTGACGTGCACCTTTGAACGTCGTCCAACTAAATCCGAGCCGT
ATCCCAGTACGCAGTCCGCCAAATTGTCCGAGTCGCCGACCGTTTCGTCG
AGAACAGACGATGCCATTGCCGCCTTTCAGCATCAAGTCGCGGATGCATC
TGCTTTCCTCCGCGAGTGGGGCGCGCAGGACCCCGAATTGATGCATCATT
ACTGTATCTACGCCGCAAAGACTCTGTCAGATCGGGAGGCGATCCGCGAT
GTTTGGCAGATTGAAGTGCCGAAAATTGCCTATTCGTACGAATTCCTCAT
GCATGGCATCTTGTCGCTGTCGGCCCTGCACTTGGCCTACACTAGACCCG
AAAGATACAGCCACTATCTCAACAGCTCCAACTTCCACATGGCACTGGGC
CTGCAAACATTCCGCATAATATTACAGAACCCTAACAAACAGAATTGTGA
GGCACTATTCTGCTTCTCAAGTCTAATCATGGTTTGGACCTGTGGAGCAC
CGACCGATCTGGGTGATAGCCGTCCCTTGGAAAGTATCATCCGCCTTTTC
AACTTGTGCAGGGGGATCATGACCCTTCATCCTTTTATGTCGCACGTTGA
AAACGGTCCTCTAGCGCCATTGTTTCTAAAAGACTTTCGATCCGACCCTG
GCCCGTCCCAGTAAGCTCCCCCGCAGACTGGAATATCGCGCAAGCTAACC
CGACAAAAAGGGACCATATCCAGTCTCTGCGCTTCCCAGGACTGGACAAT
CAAATAGATGCAATCAGAAAGTTGATCGCATCAGAACCTCTCAGTGAGCA
GGAGAGACTCATTTATCAGCAGGCCACGGAGTGTTTGGAAAAAGCATTCT
GGCGTTTGCAGGTGTGTGAAAAGCCTGCCCAATGTGGGATAATCTTTATG
TGGCCGATCAGCGTGCGGGATGAATTTGTAGGCTTTCTCCTGGATAAGAG
CCCGATTGGACTTATCTTGCTGGCACAATATTGTGCCCAGTTATACCTGT
TTCGTGGGTACTGGTTCGTAGAAGACCGCGCCCAGGAGTTGCTTTCTGCA
GTAGCTGCTGCCCTACCGTCGCGGCTTGCACACTGGCTAGATTGGCCAAG
GCAGTTTTGCTCCAGTGGCAGCCTTCCTGCGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000169:251734..253017+

>ATCC10864_006638-T1 ID=ATCC10864_006638-T1|Name=ATCC10864_006638-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3564bp|location=Sequence derived from alignment at MCQH01000169:251734..253017+ (Aspergillus niger ATCC 10864)
ATGCCTCCGCGACGAGCCCATACGAAGTCCCGGAACGGATGCGACCAGTG
CAAAACTCGGCGAGTCAAATGCGATGAAGCCCAGCCATGTGCCAACTGCG
TGAAACGACACCTGACGTGCACCTTTGAACGTCGTCCAACTAAATCCGAG
CCGTATCCCAGTACGCAGTCCGCCAAATTGTCCGAGTCGCCGACCGTTTC
GTCGAGAACAGACGATGCCATTGCCGCCTTTCAGCATCAAGTCGCGGATG
CATCTGCTTTCCTCCGCGAGTGGGGCGCGCAGGACCCCGAATTGATGCAT
CATTACTGTATCTACGCCGCAAAGACTCTGTCAGATCGGGAGGCGATCCG
CGATGTTTGGCAGATTGAAGTGCCGAAAATTGCCTATTCGTACGAATTCC
TCATGCATGGCATCTTGTCGCTGTCGGCCCTGCACTTGGCCTACACTAGA
CCCGAAAGATACAGCCACTATCTCAACAGCTCCAACTTCCACATGGCACT
GGGCCTGCAAACATTCCGCATAATATTACAGAACCCTAACAAACAGAATT
GTGAGGCACTATTCTGCTTCTCAAGTCTAATCATGGTTTGGACCTGTGGA
GCACCGACCGATCTGGGTGATAGCCGTCCCTTGGAAAGTATCATCCGCCT
TTTCAACTTGTGCAGGGGGATCATGACCCTTCATCCTTTTATGTCGCACG
TTGAAAACGGTCCTCTAGCGCCATTGTTTCTAAAAGACTTTCGATCCGAC
CCTGGCCCGTCCCAGGACCATATCCAGTCTCTGCGCTTCCCAGGACTGGA
CAATCAAATAGATGCAATCAGAAAGTTGATCGCATCAGAACCTCTCAGTG
AGCAGGAGAGACTCATTTATCAGCAGGCCACGGAGTGTTTGGAAAAAGCA
TTCTGGCGTTTGCAGGTGTGTGAAAAGCCTGCCCAATGTGGGATAATCTT
TATGTGGCCGATCAGCGTGCGGGATGAATTTGTAGGCTTTCTCCTGGATA
AGAGCCCGATTGGACTTATCTTGCTGGCACAATATTGTGCCCAGTTATAC
CTGTTTCGTGGGTACTGGTTCGTAGAAGACCGCGCCCAGGAGTTGCTTTC
TGCAGTAGCTGCTGCCCTACCGTCGCGGCTTGCACACTGGCTAGATTGGC
CAAGGCAGTTTTGCTCCAGTGGCAGCCTTCCTGCGTGAATGCCTCCGCGA
CGAGCCCATACGAAGTCCCGGAACGGATGCGACCAGTGCAAAACTCGGCG
AGTCAAATGCGATGAAGCCCAGCCATGTGCCAACTGCGTGAAACGACACC
TGACGTGCACCTTTGAACGTCGTCCAACTAAATCCGAGCCGTATCCCAGT
ACGCAGTCCGCCAAATTGTCCGAGTCGCCGACCGTTTCGTCGAGAACAGA
CGATGCCATTGCCGCCTTTCAGCATCAAGTCGCGGATGCATCTGCTTTCC
TCCGCGAGTGGGGCGCGCAGGACCCCGAATTGATGCATCATTACTGTATC
TACGCCGCAAAGACTCTGTCAGATCGGGAGGCGATCCGCGATGTTTGGCA
GATTGAAGTGCCGAAAATTGCCTATTCGTACGAATTCCTCATGCATGGCA
TCTTGTCGCTGTCGGCCCTGCACTTGGCCTACACTAGACCCGAAAGATAC
AGCCACTATCTCAACAGCTCCAACTTCCACATGGCACTGGGCCTGCAAAC
ATTCCGCATAATATTACAGAACCCTAACAAACAGAATTGTGAGGCACTAT
TCTGCTTCTCAAGTCTAATCATGGTTTGGACCTGTGGAGCACCGACCGAT
CTGGGTGATAGCCGTCCCTTGGAAAGTATCATCCGCCTTTTCAACTTGTG
CAGGGGGATCATGACCCTTCATCCTTTTATGTCGCACGTTGAAAACGGTC
CTCTAGCGCCATTGTTTCTAAAAGACTTTCGATCCGACCCTGGCCCGTCC
CAGGACCATATCCAGTCTCTGCGCTTCCCAGGACTGGACAATCAAATAGA
TGCAATCAGAAAGTTGATCGCATCAGAACCTCTCAGTGAGCAGGAGAGAC
TCATTTATCAGCAGGCCACGGAGTGTTTGGAAAAAGCATTCTGGCGTTTG
CAGGTGTGTGAAAAGCCTGCCCAATGTGGGATAATCTTTATGTGGCCGAT
CAGCGTGCGGGATGAATTTGTAGGCTTTCTCCTGGATAAGAGCCCGATTG
GACTTATCTTGCTGGCACAATATTGTGCCCAGTTATACCTGTTTCGTGGG
TACTGGTTCGTAGAAGACCGCGCCCAGGAGTTGCTTTCTGCAGTAGCTGC
TGCCCTACCGTCGCGGCTTGCACACTGGCTAGATTGGCCAAGGCAGTTTT
GCTCCAGTGGCAGCCTTCCTGCGTGAATGCCTCCGCGACGAGCCCATACG
AAGTCCCGGAACGGATGCGACCAGTGCAAAACTCGGCGAGTCAAATGCGA
TGAAGCCCAGCCATGTGCCAACTGCGTGAAACGACACCTGACGTGCACCT
TTGAACGTCGTCCAACTAAATCCGAGCCGTATCCCAGTACGCAGTCCGCC
AAATTGTCCGAGTCGCCGACCGTTTCGTCGAGAACAGACGATGCCATTGC
CGCCTTTCAGCATCAAGTCGCGGATGCATCTGCTTTCCTCCGCGAGTGGG
GCGCGCAGGACCCCGAATTGATGCATCATTACTGTATCTACGCCGCAAAG
ACTCTGTCAGATCGGGAGGCGATCCGCGATGTTTGGCAGATTGAAGTGCC
GAAAATTGCCTATTCGTACGAATTCCTCATGCATGGCATCTTGTCGCTGT
CGGCCCTGCACTTGGCCTACACTAGACCCGAAAGATACAGCCACTATCTC
AACAGCTCCAACTTCCACATGGCACTGGGCCTGCAAACATTCCGCATAAT
ATTACAGAACCCTAACAAACAGAATTGTGAGGCACTATTCTGCTTCTCAA
GTCTAATCATGGTTTGGACCTGTGGAGCACCGACCGATCTGGGTGATAGC
CGTCCCTTGGAAAGTATCATCCGCCTTTTCAACTTGTGCAGGGGGATCAT
GACCCTTCATCCTTTTATGTCGCACGTTGAAAACGGTCCTCTAGCGCCAT
TGTTTCTAAAAGACTTTCGATCCGACCCTGGCCCGTCCCAGGACCATATC
CAGTCTCTGCGCTTCCCAGGACTGGACAATCAAATAGATGCAATCAGAAA
GTTGATCGCATCAGAACCTCTCAGTGAGCAGGAGAGACTCATTTATCAGC
AGGCCACGGAGTGTTTGGAAAAAGCATTCTGGCGTTTGCAGGTGTGTGAA
AAGCCTGCCCAATGTGGGATAATCTTTATGTGGCCGATCAGCGTGCGGGA
TGAATTTGTAGGCTTTCTCCTGGATAAGAGCCCGATTGGACTTATCTTGC
TGGCACAATATTGTGCCCAGTTATACCTGTTTCGTGGGTACTGGTTCGTA
GAAGACCGCGCCCAGGAGTTGCTTTCTGCAGTAGCTGCTGCCCTACCGTC
GCGGCTTGCACACTGGCTAGATTGGCCAAGGCAGTTTTGCTCCAGTGGCA
GCCTTCCTGCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006638ATCC10864_006638Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006638-T1.exon1ATCC10864_006638-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_006638-T1.exon2ATCC10864_006638-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006638-T1.exon3ATCC10864_006638-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006638-T1.cdsATCC10864_006638-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006638-T1ATCC10864_006638-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001138
PFAMPF00172
InterProIPR021858
InterProIPR036864
Properties
Property NameValue
NoteantiSMASH:Cluster_1000169.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:251734..253017 +
Powered by Drupal